- Transcript 'Cisavi.CG.ENS81.R44....' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S24.g14985.01.t
Possible name(s)
MYD88; TLR3; TLR4
Gene model
Location
S24 [261,887 / 265,732]
Amino acid sequence
Length: 495
>Harore.CG.MTP2014.S24.g14985.01.p
MIVLFYLIRATLLYIFWYFFCIITMSYGSRVPTESACDSTTSDFPVSRTSPYGFSSSPVE
HSEISSEKTSDSVFLELCNRSNSEPDNVKGPDSTFNASVVSPESPPAYTTQQYSPLSENH
NVHYHSAGAQLPADDLLQMAVNSIALISHLPVTILGPTTLDRLSVLLDPDISPSKNWKHM
AEEMDFDNYQIRKFEERNNKTKSVIDAWGRKIYRGKMPTVGDLINILRFVIERIDVVTEI
SKYFLADARRAQNRMANYASPTPIHQQSLQSYPSQGQIPNYGGLQLSPISHQASIAQYST
VREESFERTEKVAWDNESSPVQDPRVGSGMPEYDAFILCNIADKKFVVDQFLPNVEEKAR
LKLCFAERDMPAGNLSFDQQLNYMCNRSRKLVVILSDEFFQSREHSWQSNLAISQDPASR
SARIIVVKYKKLSVANIFDYLGCCDLTKSMKDEWFWNKIINGIKKHLHDHVMLFVSVIDL
ILYTSSCLVNSWNEY
Nucleotide sequence
Length: 2,417
>Harore.CG.MTP2014.S24.g14985.01.t
ATGATTGTTTTATTCTATCTTATTAGAGCTACTTTATTGTACATTTTTTGGTATTTTTTC
TGCATCATCACCATGTCTTACGGAAGTCGCGTCCCTACCGAATCGGCTTGCGACAGCACA
ACATCGGATTTCCCGGTAAGCCGCACCTCTCCGTACGGTTTTTCCTCTTCTCCTGTAGAA
CACTCGGAGATATCCAGCGAAAAGACAAGTGACTCGGTTTTCCTAGAATTGTGTAATCGG
TCCAACAGCGAGCCTGATAACGTGAAGGGGCCGGATTCCACTTTTAATGCAAGCGTAGTT
TCGCCTGAATCACCGCCAGCTTACACGACCCAACAATATTCGCCCTTGTCTGAAAACCAC
AACGTGCATTACCATTCGGCTGGGGCTCAACTACCAGCGGATGATTTGCTCCAGATGGCT
GTAAATTCTATTGCTTTGATTTCTCATTTACCTGTCACAATACTTGGACCGACGACCCTT
GACCGTTTGTCAGTATTATTGGATCCTGATATTTCACCTTCAAAAAATTGGAAGCACATG
GCTGAAGAGATGGATTTCGATAACTACCAGATAAGAAAATTTGAAGAACGGAATAACAAA
ACCAAATCAGTCATAGATGCATGGGGAAGAAAGATTTACCGTGGAAAAATGCCAACTGTT
GGGGATCTGATCAATATTTTACGATTTGTCATTGAACGAATTGATGTTGTTACTGAAATC
TCAAAGTACTTCTTGGCCGATGCTAGACGCGCGCAGAACCGGATGGCAAATTATGCCAGT
CCAACGCCGATTCACCAACAAAGCCTTCAATCATACCCAAGCCAGGGTCAAATACCCAAT
TATGGTGGTTTACAGCTTTCACCCATATCTCATCAAGCTTCCATTGCCCAATACAGCACC
GTTCGCGAAGAGAGTTTCGAAAGAACGGAAAAAGTGGCGTGGGATAACGAATCTTCTCCT
GTCCAGGATCCGAGAGTAGGATCCGGAATGCCGGAATACGATGCGTTTATTTTATGCAAC
ATTGCCGACAAAAAGTTTGTCGTCGATCAATTTTTGCCAAACGTTGAAGAAAAGGCCCGA
TTGAAGTTGTGTTTTGCCGAACGTGATATGCCTGCTGGAAATCTTTCATTTGATCAACAA
TTGAACTACATGTGCAACAGATCCAGGAAGCTTGTTGTCATCCTATCGGATGAGTTTTTT
CAAAGCAGAGAGCATTCCTGGCAGTCGAATTTAGCAATAAGTCAAGATCCAGCCTCAAGG
AGCGCTCGTATCATCGTGGTAAAATATAAAAAGCTGAGCGTGGCGAACATTTTTGATTAT
CTCGGATGCTGTGACCTCACCAAATCAATGAAGGATGAATGGTTCTGGAACAAGATTATA
AACGGAATTAAGAAACACTTACATGATCATGTCATGCTATTTGTTAGTGTAATTGATCTC
ATTCTTTATACATCTTCTTGCCTAGTCAACTCATGGAATGAATACTAGCTATTGGGTTTT
TTTATAGTGCCCTTTTTGTACAAAAATTGTGCATCGGTTCTGATGCAGATTTCAAACTTT
GATAAATTTTATAGATCTAGATAAATAGATCTTACTTTTATTGGTACATATAATATGCAT
TGCATTATTTTATTTTATTTCTACTTGATTATGATCAAGAATCATGGAGTAATGATGACA
CGTTATTGAGCTATCCTCTGGAACTGTACAGCTGTTTTTTCAACCAAGGAATCTTTCAGT
TTAGGACATATTTTGAACAGTAAAAAAGGTCGAGAGACCCTTCGACCCACTGATAACAAA
AACTTGTTATTGATTCAGCAAATGATAGACTGTGAATTCTGCTAACATTAGATGAAGGTT
ATATATGTTAAGTGGAATCATATCACTCCAAGATTCAGCACATTTACAAGCCAAATTCAC
AGAAGTCTCTTAACAGCCTAAATACTATTTTCATCTATTGTGGTAGTACATGATATTCAT
AAGAATGATTGCTTTGAGCAGTACACTTTCTTGGTTTCCATGATACATTTCTATGATGAT
TACTTGTTATGCTCTTAATACACATAAGTGGACTGCTTTCATTATTACCAGAAATTGTCT
AATGTCTATATTTTTGTTCCCTCTAAAGTCATTTCCAAAACGAGTACAGCATAGTTTTAC
TCTTGAATCGCCTAAAGTAATTTCTATTAGTTTTACCATTTCTCTATGGCTCTATATAAT
ATTTTTAATGTTTGTAGATACCTATCTCATACCATGTGTAAATATATTTGCTTACAAAAT
AACTAAATTAGATTTATGCAATTGGATGGCATTTGATATCACGTCATGAGGTCATTCCCA
GTTGATGTATAATATCAAGTCGTATTTGGATCGGATTCGGAACGAAACAGTAACGCAATT
GTGGATATTGCTGAAAG
| SUPERFAMILY |
DEATH-like_dom_sf (IPR011029) - T[148-257] 7.33E-13 |
| Pfam |
Death_domain (IPR000488) - T[162-242] 9.3E-6 |
| ProSiteProfiles |
Death_domain (IPR000488) - T[176-228] 10.563 |
| ProSiteProfiles |
TIR_dom (IPR000157) - T[331-407] 14.672 |
| SUPERFAMILY |
Toll_tir_struct_dom_sf (IPR035897) - T[331-462] 2.22E-18 |
| SMART |
TIR_dom (IPR000157) - T[332-466] 0.0023 |
| Gene3D |
Toll_tir_struct_dom_sf (IPR035897) - T[332-463] 2.0E-24 |
| Pfam |
TIR_dom (IPR000157) - T[341-432] 2.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYD88_HUMAN | 25.857 % | 112 | 9.63E-28 |