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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S24.g07873.01.t

Possible name(s)

RPL27A

Location

S24 [444,582 / 446,490]

Sequences

Amino acid sequence

Length: 177

>Harore.CG.MTP2014.S24.g07873.01.p
MMQCNLETIAKKVQESIIPTTCHYLGQNSIRVARFKKTRKLRGHVSHGHGRVGKHRKHPG
GRGNAGGQHHHRINFDKYHPGYFGKVGMRTFHVNRNKQYCPTVNLDKLWSLVSEQTRTQY
KDRKDVAPVIDVVRAGFFKVLGKGILPKQPVIVKARFFSRRAEEKIKKVGGTCILTA

Nucleotide sequence

Length: 692

>Harore.CG.MTP2014.S24.g07873.01.t
ATCCATACGACTGCTGTCAGAAATCATATTCTTCGTTACAGCGAAAATCGGTAAAGGTTA
AAGGTAACTATCGGATTTTTAACCGGTTCATGTCTTTTCTCTCATCGAAACTACAAGATG
ATGCAATGTAACCTGGAAACTATTGCCAAGAAGGTCCAGGAATCGATTATACCCACAACT
TGCCATTATCTGGGGCAAAACAGCATTCGAGTTGCAAGGTTCAAGAAAACTCGTAAGCTG
CGAGGTCACGTGAGCCATGGTCATGGTCGTGTAGGAAAGCACCGTAAGCATCCTGGAGGT
CGTGGAAATGCTGGTGGACAACATCATCACAGGATCAATTTTGATAAATACCATCCTGGT
TATTTCGGTAAGGTAGGAATGAGAACCTTCCATGTGAACCGTAACAAGCAGTACTGTCCC
ACCGTAAACCTGGATAAGTTGTGGTCCCTGGTGAGTGAGCAAACCAGAACCCAGTACAAA
GACAGAAAAGATGTCGCCCCAGTCATCGACGTTGTTCGTGCGGGTTTCTTCAAGGTTTTG
GGTAAAGGTATTTTGCCAAAACAACCTGTCATTGTTAAGGCGAGGTTCTTCAGCCGTAGA
GCTGAGGAGAAAATTAAGAAGGTCGGAGGAACTTGTATCCTCACTGCTTGATTTTTTTTG
TCTTTTGGCAAAATAAAACTCCTTATGCGAAA

InterProScan

Hamap
Ribosomal_L15 (IPR030878) - T[32-176] 11.449
SUPERFAMILY
L18e/L15P_sf (IPR036227) - T[36-176] 3.79E-43
Pfam
Ribosomal_L18e/L15P (IPR021131) - T[58-174] 1.0E-24
ProSitePatterns
Ribosomal_L15_CS (IPR001196) - T[139-170] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL27A_HUMAN 77.397 % 242 1.79E-83