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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S63...' > 
  2. Transcript 'Cisavi.CG.ENS81.R417...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S24.g03713.01.t

Possible name(s)

COPS7B; EIF3M

Gene model

Harore.CG.MTP2014.S24.g03713

Location

S24 [320,213 / 325,302]

Sequences

Amino acid sequence

Length: 546

>Harore.CG.MTP2014.S24.g03713.01.p
MERLFVELAQPLLKRVINLMGLDLIPWQNRKQDGESEGPIDQHEDWKANFSLSPDTFVSL
CALANRILCREDEIDGISVSTIKQTGTQLEDADFYNIEGKLRENEVNPLTKRLLLYNLDV
KMSVPAFIDLPPADQAKELREYLNTIGAEIEEENKEDLYEDVLDIVKATEVLWKSGDVRD
IEGVINSILSILFVIPPTNCAPLIKLLCDQLVAAAEGEKAALSMKLLHNFFHGYGIKTPF
LYDTYCAWVKVASINNCIHLVPTDLKKVNMWLDLWEVTREKKQLVLRLIYDAQITCGQSD
DAAKTMIQLLGDYTEDNASQAREDAHKCIVRALADPNTYLYDHLLTLKPVKFLEGELIFD
LLNIFISGKLEDYLQFHTDNQEFLSSIELDHDQCVKKIRLLSLIDVVTGKKEVPFQDIQA
LLQLKEDDLEEFIIDAIQSKLIHGKIDHLNRKLLVSHTTQRTFGRNQWQQLADRLHEWRA
GLMKTHARLATLDPVGALDRTYCLVWWFSEGLSHIRRVCVVIRINPTPYNVKLNKYIVLI
ILDWNM

Nucleotide sequence

Length: 2,276

>Harore.CG.MTP2014.S24.g03713.01.t
ATGGAACGTCTGTTTGTTGAACTTGCACAACCACTTCTCAAAAGAGTAATCAATTTAATG
GGACTCGACTTGATACCTTGGCAAAACAGAAAACAAGATGGAGAGTCTGAAGGACCTATT
GATCAGCATGAAGATTGGAAAGCAAACTTCAGTCTGAGTCCTGATACTTTTGTGAGCTTG
TGCGCTTTGGCTAATCGTATACTGTGCAGAGAAGATGAAATTGATGGAATATCGGTTAGC
ACAATCAAGCAAACAGGAACTCAATTGGAAGATGCAGACTTCTACAATATCGAGGGGAAA
TTGCGTGAAAATGAAGTGAATCCGTTAACCAAAAGATTGCTTTTGTATAATCTAGATGTT
AAAATGAGCGTTCCGGCATTCATTGATCTTCCTCCAGCCGATCAGGCAAAAGAACTGCGG
GAATATTTAAACACAATTGGTGCTGAAATAGAGGAAGAAAATAAGGAAGATTTGTATGAA
GATGTTCTGGATATAGTAAAGGCGACAGAAGTGTTGTGGAAGTCTGGTGATGTTCGAGAT
ATTGAAGGTGTCATCAACAGTATATTATCTATACTTTTTGTCATCCCTCCGACAAATTGT
GCACCGTTGATAAAACTTTTATGCGACCAGCTTGTGGCAGCTGCTGAGGGAGAGAAAGCA
GCTCTTAGCATGAAATTACTTCACAATTTCTTCCACGGATACGGGATAAAGACTCCGTTT
TTGTATGACACGTATTGCGCTTGGGTCAAAGTCGCAAGTATCAACAATTGCATTCATCTT
GTGCCCACTGATTTAAAAAAGGTCAATATGTGGCTTGACTTGTGGGAAGTTACCAGAGAA
AAAAAACAGCTTGTGTTAAGACTTATATACGACGCACAAATCACCTGTGGCCAAAGCGAT
GACGCAGCCAAAACAATGATTCAGCTCCTCGGTGATTATACAGAAGATAATGCATCACAA
GCTAGAGAAGATGCTCACAAATGCATCGTTCGTGCTCTGGCTGATCCTAATACATACCTT
TATGATCATCTGTTGACCCTGAAGCCTGTTAAGTTCCTAGAAGGAGAATTAATATTTGAT
CTGCTGAACATTTTTATAAGTGGTAAATTAGAGGACTATCTCCAGTTTCATACCGACAAC
CAGGAATTCCTGTCATCAATAGAACTCGACCATGATCAATGTGTAAAAAAGATAAGATTG
TTATCATTGATCGATGTGGTAACTGGTAAGAAAGAAGTTCCTTTCCAAGATATTCAGGCA
CTTCTTCAGCTCAAGGAAGATGATTTGGAGGAGTTTATTATTGATGCTATTCAAAGCAAA
CTAATCCATGGAAAAATAGATCATTTGAATAGAAAACTCCTAGTCAGTCACACAACACAA
AGAACGTTTGGCCGAAATCAATGGCAGCAGTTAGCCGATCGCTTGCATGAATGGAGAGCG
GGTTTAATGAAAACTCACGCAAGGCTTGCAACACTAGACCCTGTTGGGGCCTTAGATAGA
ACTTATTGCTTAGTATGGTGGTTCAGTGAGGGACTATCACATATCAGAAGGGTATGTGTG
GTTATTAGAATTAACCCAACTCCCTATAATGTAAAACTGAATAAATATATTGTATTGATT
ATTTTGGACTGGAATATGTAGGTTATCAATCGGATTTGTTAGATTACCCTGAAGCTAACT
GGCAGTTAGATAATGTGTATTGTTGTACTAGTATTGTATTTGTGGTTGCTAAGCTCTACT
ATTGATAACAAGAGCTGATATTTTGGTAAGGTGTTGTGATACATATTTGAATACTTGTGG
ATTCAGGTTAACTCATAATTGTGTTACCTCGGCCTAATTATGAGGAGCTTCACATAAACT
AAACTTAAGTAAAAGGTGAACTGAATAAGGCAAAAGTGTAACTTTTATTTGAAGTATTCA
GTTCCAAAAACAAGGCCAGTGTACTACTGTATAAAACTTGGACTGAATTATAAATAGTGA
AAGCTCGGTTGGGAAAGCAGGTTTTTCCCGATAAACTGGTATAATTTTTTTATTACATTA
TCACATATACACCGGATAGGTCTTGTATAAAACTGATCCCGGCACAACGTAGGGATTTCT
ACAATGTATGTCTTGAAGATTGGAATGTTTGGGAAAATATCGAGGAGTTTGCTGTTTTGG
GGCCCATGGCTCTTCTGTTGAATATTTCTCGAGTGCAGAGGGGCGCCATTCCCTATGTGC
GAACATTGAATTTTGAACAGCTGGCAGTTTTCTAGTGCTTCTTTTCGGCGTTTTTT

InterProScan

Hamap
eIF3m (IPR027528) - T[122-495] 22.225
Pfam
PCI_dom (IPR000717) - T[358-456] 3.9E-16
SMART
PCI_dom (IPR000717) - T[389-478] 1.5E-20
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[392-459] 8.16E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3M_HUMAN 50.269 % 387 1.34E-131