- Transcript 'Harore.CG.MTP2014.S9...' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S9...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S24.g02028.01.t
Possible name(s)
MYBPC1; MYBPC2; MYBPC3
Gene model
Location
S24 [368,517 / 383,344]
Amino acid sequence
Length: 1,289
>Harore.CG.MTP2014.S24.g02028.01.p
MPSTAAPTNSAPAKIVKKKVVKKVVKKKKESVTTPTVEPKIGTPAEKPKEEMKELIPKVE
EKGNETKETTPVPAEESVGNAPNGEAKGLIVEKPENIATTEGQEVTVKTRVTGGDVIHPI
RITWVKGKWNALSRGDRFEMWENERTGEHYLKFKHPKQSDTGTYKLKASGQAGDDECSFE
VFVGPPIVEEKKIEIKKGYIPTEKELERDVDFRNRLKKVEKYKKEEESGEWDVWSLLKNA
ASREYEAIGFKFGICDMRAMLRRLSNTKKRETQKAASFTKKLPETMSCSIGEKLVLETEV
ANEQMTVKWQKNGEGIDASKHYQIMTKENKRTLIIDSAVMSDDATYSCIVGKDITNCELF
VREHPVTITKGLEDIQVVEGEDAEFACELSNENGKFRILKDGCLIEQGEKYKIHKEGSKI
TFQVNKISTEDEGFYQVVTNGAQSCAEIVVQEASKITQAFSDLKDKKIRKLMIGTVNDND
QGEYSFIAEGNSSCAISAALELTGGHITVEKKKVPPKIFLDNSKKDRAIVVRAGAKIKLD
IPISGEPAPVPEWKKGPKIIETETRSRVRVSNSINGTRSTLIIDKSKRNDSGDYTLTLSS
EEGCESATFTIKDGKQNVISATGKRMWCNTSTEAHHTYLILNNIQLNDSDFYTCDLVWDS
SAQEGADFESVRRQEMQFSIRVVDVPSVPSTPVVSNVTAETCRAEWNEPASNGGCPIKGY
VIERKKTQSQRWIRLNMEPLPLTDYEARRMIEGIEYQIRVRAVNDIGLSEPSEPSKPFTP
LAPCSIPTNFKISATTDDSIELSWLPPLEIGAAGLDGYKSLVDKKLTKINLDKLQTGKKY
AFRIAAVNKVRLSPYAEVGPAVCAYLVEEAKIVMPRPYLKPVKVKVGAKLHLNIPYQGKP
KPALVWTKDGKTLEEHVAVRNSHDSSVLFIRTAERWDSGRYQLDLTVGDDVVKAHIDVAV
IDIPSKPRQVKLVEVIGNSASLKWEEPSDTGNTDIVGYVVEKRDARSDDWYLSSSLYWTL
HYTFSDYYQGACCISTKFVVYDKLRHKQCQVSDLVLGNNYFFRVKALNEVGLGDSAATKD
SANIPKERTVYKKPEYAAMDFRMKPEFTQTLNNRRIVENYNGTLSCALKCNPRPKIRWFK
NKIEIIDNPKYKLSQSMGIVQLEIRRARLNDAGTYTVTATNELGEASCSADVTIKEIKVE
TPKSTAILMNRTFPSMSFGMLKDNLMEIMSTDSENRTSYCYISNSKNLYLYVLPKQYMKH
VNILQGIGIFAYFTFSSNSFHEILFNNRH
Nucleotide sequence
Length: 4,121
>Harore.CG.MTP2014.S24.g02028.01.t
ATGCCGAGCACAGCAGCCCCAACAAATTCAGCTCCCGCGAAAATCGTGAAGAAAAAGGTT
GTCAAGAAAGTCGTGAAGAAGAAGAAAGAATCTGTAACCACACCCACCGTAGAACCAAAA
ATAGGAACCCCTGCTGAAAAACCGAAAGAAGAAATGAAGGAACTGATCCCCAAAGTCGAA
GAGAAAGGCAATGAAACAAAAGAAACTACTCCGGTTCCGGCAGAAGAGTCAGTAGGGAAT
GCTCCCAACGGAGAAGCAAAGGGACTCATTGTGGAAAAGCCGGAGAATATAGCCACCACA
GAAGGTCAAGAAGTCACAGTAAAAACTCGCGTTACTGGTGGTGACGTCATCCATCCGATT
AGAATCACGTGGGTGAAAGGAAAGTGGAACGCGCTTTCCAGGGGTGATCGATTCGAAATG
TGGGAAAACGAACGAACGGGGGAACATTATCTCAAATTTAAGCACCCCAAACAAAGTGAC
ACGGGAACGTACAAGCTAAAAGCGTCAGGTCAAGCAGGCGATGATGAATGTTCTTTCGAA
GTGTTTGTAGGACCTCCGATTGTGGAAGAAAAGAAGATTGAGATCAAGAAAGGTTATATC
CCAACTGAAAAAGAACTAGAAAGGGATGTTGACTTCCGCAATAGACTCAAGAAAGTTGAA
AAATACAAAAAAGAGGAAGAATCTGGCGAATGGGACGTCTGGTCGTTGCTAAAAAATGCC
GCGTCCCGAGAATACGAGGCTATCGGTTTCAAATTCGGAATCTGCGACATGCGCGCAATG
CTTCGTCGTCTTTCAAACACCAAGAAACGAGAGACTCAGAAAGCTGCATCTTTCACCAAG
AAGCTTCCAGAAACAATGTCATGCAGCATCGGAGAGAAGCTTGTTCTGGAAACCGAAGTA
GCGAATGAACAGATGACTGTGAAATGGCAAAAGAATGGCGAAGGAATAGATGCAAGCAAA
CATTATCAAATAATGACAAAGGAAAACAAACGAACTCTGATCATTGATAGCGCGGTGATG
AGTGACGACGCAACCTACTCGTGCATTGTAGGAAAGGATATTACTAATTGCGAGTTATTT
GTTCGAGAACACCCAGTTACAATTACCAAAGGACTAGAAGACATTCAAGTCGTTGAGGGA
GAAGATGCGGAATTTGCATGCGAGCTCTCAAATGAGAATGGAAAATTCCGTATTCTCAAA
GACGGATGCCTGATTGAACAAGGAGAGAAATACAAAATCCACAAAGAAGGATCAAAAATA
ACTTTCCAAGTCAATAAGATTTCGACAGAAGATGAGGGATTTTACCAAGTTGTTACTAAC
GGAGCCCAGTCTTGTGCTGAAATCGTTGTACAGGAGGCATCGAAAATAACTCAAGCTTTC
TCCGATCTCAAAGATAAAAAGATCCGTAAATTGATGATTGGTACAGTCAACGACAATGAC
CAAGGAGAATATTCATTCATTGCTGAAGGCAATTCCAGTTGTGCTATCTCTGCAGCTCTT
GAGCTCACTGGAGGGCACATAACAGTGGAGAAAAAGAAAGTGCCACCCAAGATTTTTCTT
GACAATTCTAAAAAAGATAGAGCGATCGTGGTTAGAGCCGGAGCTAAAATTAAACTCGAT
ATTCCCATATCAGGAGAACCTGCCCCAGTTCCGGAATGGAAAAAGGGTCCCAAGATAATA
GAAACTGAAACAAGAAGCAGAGTACGTGTAAGCAACTCTATTAACGGTACGAGATCTACT
TTGATAATCGATAAATCGAAACGAAATGATTCTGGTGATTACACTCTCACGCTATCTAGT
GAGGAAGGCTGTGAATCTGCGACATTTACTATAAAGGATGGAAAACAAAATGTCATCTCT
GCCACTGGAAAGCGCATGTGGTGTAACACAAGCACTGAAGCCCATCACACTTACCTTATA
CTAAACAATATCCAACTGAACGATAGCGACTTTTATACTTGCGATTTGGTGTGGGATAGC
AGTGCACAAGAGGGTGCCGACTTCGAAAGCGTACGCCGGCAGGAAATGCAGTTCAGTATT
CGAGTCGTTGATGTTCCGAGCGTTCCATCGACACCAGTCGTGTCTAACGTTACCGCAGAG
ACTTGCCGTGCTGAGTGGAATGAACCTGCTAGCAATGGCGGATGCCCAATAAAAGGTTAC
GTCATCGAACGTAAAAAAACGCAATCCCAGCGCTGGATTCGTTTGAACATGGAACCTCTG
CCACTGACCGACTACGAAGCCAGAAGAATGATTGAAGGTATTGAATATCAAATACGCGTT
CGTGCCGTCAATGACATTGGTCTCAGCGAGCCGAGTGAACCAAGCAAGCCATTCACGCCA
CTTGCTCCATGTAGCATACCTACCAACTTTAAAATATCTGCTACCACCGATGATAGCATC
GAGTTATCTTGGTTGCCGCCATTGGAAATTGGAGCCGCAGGTCTTGACGGTTACAAGAGT
CTGGTGGATAAAAAGTTGACAAAAATAAATCTTGACAAATTACAAACGGGGAAGAAGTAC
GCTTTCCGCATAGCTGCAGTCAACAAAGTCAGATTAAGCCCTTATGCTGAAGTCGGCCCG
GCTGTTTGCGCCTATCTCGTTGAGGAAGCGAAAATTGTTATGCCACGTCCATACTTGAAA
CCAGTCAAAGTAAAAGTTGGAGCCAAACTCCACTTGAATATCCCATACCAGGGTAAGCCG
AAACCAGCTTTGGTCTGGACCAAGGACGGAAAAACGCTGGAAGAGCATGTTGCTGTTAGA
AATTCACACGATTCCAGTGTGCTTTTCATTAGAACTGCAGAACGATGGGATTCTGGTCGT
TACCAGCTGGATCTGACTGTAGGAGACGATGTCGTCAAAGCGCATATCGATGTGGCAGTT
ATTGACATACCTTCAAAACCACGTCAAGTAAAACTTGTCGAAGTGATTGGAAATTCCGCC
TCTCTGAAATGGGAAGAACCAAGCGATACAGGAAATACCGATATCGTCGGTTACGTCGTT
GAAAAGCGCGATGCAAGAAGCGATGATTGGTATTTATCTTCCTCTCTTTACTGGACCTTA
CACTATACCTTTTCTGACTATTATCAAGGAGCGTGTTGCATTTCAACAAAGTTTGTTGTG
TACGATAAATTGCGACACAAGCAATGTCAAGTCAGCGATTTGGTCCTGGGAAACAATTAT
TTCTTCAGAGTGAAGGCACTGAATGAAGTTGGATTGGGTGATTCTGCTGCTACTAAGGAT
AGCGCCAACATCCCGAAAGAAAGAACCGTGTACAAGAAACCCGAGTACGCCGCGATGGAT
TTCAGGATGAAACCTGAATTCACGCAAACGCTCAATAACAGACGAATCGTCGAAAACTAC
AACGGAACACTGAGCTGTGCATTGAAATGCAACCCGAGACCAAAAATCCGCTGGTTCAAG
AATAAGATAGAAATCATCGATAACCCGAAATATAAACTTTCTCAGTCCATGGGTATTGTA
CAATTGGAAATTCGTCGTGCTCGTTTGAACGACGCAGGAACCTATACAGTAACAGCTACC
AACGAACTGGGAGAAGCTTCATGTTCTGCTGATGTCACCATAAAAGAAATCAAAGTAGAA
ACTCCTAAAAGCACAGCCATCTTGATGAATAGAACTTTTCCTAGTATGTCATTTGGCATG
CTCAAGGATAACTTAATGGAAATCATGAGTACTGACTCGGAAAACAGGACAAGCTATTGT
TATATTTCTAATTCCAAAAATTTATATTTGTACGTTCTACCAAAACAGTATATGAAGCAT
GTAAATATCCTGCAGGGAATTGGTATTTTTGCCTATTTTACGTTCTCGTCAAATTCTTTC
CATGAAATCTTATTCAATAACAGACATTAGATTTGATTTACTTCAGTCTCCTAATAGAAT
TATCATTTTGTTTTTTGGTGTGTTGATATAGTGGAATTAGTAGCATTGGCCGTTCCTAAG
TTCCACTGCACGTTGGAAAACCGCATTAGTTATTTAACGTCGCAAAGAGTGGAGGTTTTT
CGGAACAATGAATACTGAATTTATTGAATAATCGCGCTGGTTTTTGGCTTCTACATGTGA
ATACATTTATTTAAATTTGAAATATATGTCTTGCATGCAAG
| Gene3D |
Ig-like_fold (IPR013783) - T[79-185] 4.2E-16 - T[270-365] 1.7E-20 - T[366-459] 6.0E-19 - T[514-614] 1.1E-13 - T[685-782] 5.3E-25 - T[783-863] 8.9E-9 - T[867-962] 1.1E-13 - T[963-1092] 6.7E-19 - T[1098-1197] 1.7E-23 |
| Pfam |
Ig_I-set (IPR013098) - T[90-183] 3.8E-9 - T[278-352] 3.1E-11 - T[367-441] 2.8E-7 - T[526-611] 2.4E-10 - T[879-960] 2.6E-11 - T[1105-1194] 4.1E-17 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[90-185] 1.59E-14 - T[281-368] 9.34E-16 - T[359-451] 1.87E-12 - T[527-611] 1.28E-12 - T[879-968] 2.98E-12 - T[1105-1197] 2.73E-22 |
| SMART |
Ig_sub (IPR003599) - T[94-184] 0.0034 - T[283-362] 0.0046 - T[372-451] 0.45 - T[526-614] 0.27 - T[879-961] 2.4 - T[1111-1195] 5.4E-7 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[285-367] 9.083 - T[516-612] 6.669 - T[1105-1193] 10.281 |
| SMART |
Ig_sub2 (IPR003598) - T[289-355] 0.21 - T[532-603] 0.29 - T[885-948] 2.8 - T[1117-1184] 0.063 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[684-858] 1.59E-32 - T[956-1076] 3.23E-16 |
| SMART |
FN3_dom (IPR003961) - T[686-769] 1.8E-9 - T[784-853] 1.6E-8 - T[964-1073] 3.9E-10 |
| CDD |
FN3_dom (IPR003961) - T[686-779] 1.06259E-19 - T[785-862] 4.69003E-10 - T[964-1078] 1.10975E-11 |
| Pfam |
FN3_dom (IPR003961) - T[688-772] 1.4E-10 - T[965-1074] 3.0E-9 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[688-784] 21.27 - T[786-866] 8.971 - T[966-1087] 11.772 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYPC1_HUMAN | 31.566 % | 528 | 3.36E-167 |
| MYPC3_HUMAN | 32.184 % | 618 | 0 |
| MYPC2_HUMAN | 32.263 % | 570 | 0 |