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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'KH2012:KH.C9.220.v2....' > 
  3. Clone 'cilv032b14' > 
  4. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S244.g00088.01.t

Possible name(s)

SNW1

Gene model

Harore.CG.MTP2014.S244.g00088

Location

S244 [56,703 / 60,738]

Sequences

Amino acid sequence

Length: 624

>Harore.CG.MTP2014.S244.g00088.01.p
MAGSSFSEENLLRILYFLNSSKIEREKFSTKGSAKDRKPFSQGFRNYRNMASLTSILPAP
SQVSYEYIEPPRSTSRAVVSNKFEPPPYGHRKGFMPRQERDFGDGGAFPEIHIAQYPLGM
GTGDKKKSNALAVKLDAEGKVRYDVIAKHGHSKDRVVHSKFSDLIPKEILNEDDPDLQRP
DEEEEQETTEATRMALEKLTNEKMSAAMPVKRAEQRAPAQYIRYTPSQQGVSFNSGAKQR
VIRMVELQSDPMEPPKFKTNKKIPRGPPSPPAPVMHSPNRKVTVKEQQEWKIPPCISNWK
NAKGYTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEMRAQVERKIAGK
EKEAKEKQLRKLAEDARNKRVGIKTDGKDKDKDLQEREDLRRERHRDRQRDRNIARAAPD
KRNRLREERDISEQIALGLPNTRHSQDAMFDQRLFNKTRGMDSGFAGGEDDLYNVYDQPW
RSEKNIGNSIYRPRGEKDKELYGEDDVDKIIKSNKFVADRGFQGTDHSRDREGPVQFEKD
EEDPFGLNKFLEQAKQVMKKDHIEVPMEPTNVLPNPAAGLKKKKASEAVNEYNKKWGKVV
GEGGCFYGAEYSYASVCCPTITFC

Nucleotide sequence

Length: 1,999

>Harore.CG.MTP2014.S244.g00088.01.t
ATGGCAGGCTCATCCTTTTCTGAAGAAAATTTATTGCGTATACTTTATTTCCTCAATTCA
TCGAAAATAGAAAGAGAGAAATTTTCCACTAAGGGAAGTGCCAAGGATAGAAAACCTTTT
TCTCAAGGATTTCGGAACTACAGAAACATGGCGTCGTTAACCAGCATTCTCCCAGCTCCA
TCCCAGGTCTCTTATGAATACATAGAACCGCCAAGATCTACCTCTCGAGCTGTCGTTTCG
AATAAATTTGAACCGCCTCCATATGGACACAGAAAAGGTTTCATGCCCCGCCAAGAAAGG
GACTTTGGCGATGGTGGGGCATTTCCTGAAATACATATTGCTCAGTATCCACTGGGAATG
GGCACCGGAGACAAGAAAAAATCAAATGCACTGGCCGTGAAACTCGACGCGGAAGGAAAA
GTTCGCTATGATGTCATTGCAAAGCATGGACATAGTAAAGACAGAGTTGTTCATAGCAAA
TTTAGTGACCTTATACCAAAAGAAATTCTGAATGAAGATGATCCAGACCTACAGAGACCA
GATGAAGAAGAAGAACAAGAGACTACCGAAGCAACACGAATGGCTTTGGAAAAACTGACT
AATGAGAAAATGTCAGCAGCGATGCCAGTGAAACGGGCAGAACAGCGTGCGCCAGCCCAA
TATATCAGATATACTCCATCTCAGCAAGGTGTTTCTTTCAATTCCGGTGCAAAGCAGAGA
GTAATTCGAATGGTTGAACTTCAGAGTGATCCTATGGAACCACCAAAGTTTAAGACAAAC
AAAAAGATACCTCGTGGACCTCCTAGTCCACCAGCCCCCGTAATGCACTCCCCGAATCGA
AAAGTTACAGTTAAAGAGCAACAAGAATGGAAAATTCCTCCATGCATATCTAACTGGAAG
AACGCTAAGGGATACACTATTCCACTCGATAAAAGACTGGCTGCTGATGGTAGAGGGTTG
CAGAGCGTTCACATCAATGAAAATTTTGCCAAACTTGCTGAAGCTCTCTACATTGCTGAC
AGAAAGGCTCGTGAAGCTGTTGAAATGAGAGCACAGGTAGAGAGAAAAATAGCTGGAAAA
GAGAAAGAAGCAAAAGAAAAACAACTACGCAAACTTGCTGAAGATGCAAGAAATAAACGT
GTCGGCATCAAGACAGATGGCAAAGATAAAGACAAGGATTTGCAAGAGAGAGAAGATCTG
AGAAGGGAGAGACATCGTGACAGACAACGGGATAGGAATATAGCACGTGCAGCTCCAGAT
AAAAGAAATAGGCTCCGAGAAGAGCGGGACATAAGTGAACAAATCGCACTTGGTCTTCCA
AATACAAGGCATTCACAGGATGCGATGTTCGATCAAAGATTGTTTAACAAGACAAGGGGC
ATGGACAGTGGATTTGCTGGTGGTGAAGACGACTTATACAACGTATATGATCAACCTTGG
CGCAGTGAAAAGAACATCGGCAACAGTATCTACAGACCACGTGGGGAAAAAGATAAAGAG
CTTTATGGTGAAGATGATGTGGACAAGATTATCAAGTCTAACAAGTTTGTTGCTGATCGT
GGTTTCCAAGGAACTGATCATTCCAGAGACAGAGAAGGTCCAGTTCAATTTGAGAAAGAT
GAAGAAGATCCATTTGGTTTGAATAAATTCTTGGAGCAGGCTAAACAGGTAATGAAGAAG
GATCATATTGAAGTTCCAATGGAGCCAACAAACGTCCTGCCGAATCCGGCAGCCGGTCTA
AAGAAGAAAAAAGCAAGCGAAGCCGTAAATGAGTACAATAAAAAATGGGGAAAGGTAGTT
GGGGAAGGGGGATGTTTCTATGGTGCTGAATATTCCTACGCTTCTGTATGCTGCCCAACC
ATTACCTTTTGCTGATTTGTAGTCGTACTTGATGGATGAGGTATTCGTATCAAATGGTTA
GGGTGATTACTTCCAACACATTGTAAAAGTACGTTTTGTTTTTATGTACAAAGGAATAAA
ATTTCGCAAATTGATCATA

InterProScan

PANTHER
SKI-int_prot_SKIP (IPR017862) - T[50-561] 2.6E-235
Pfam
SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[220-380] 4.7E-74

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNW1_HUMAN 67.51 % 676 0