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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S242.g12458.01.t

Possible name(s)

Harore.CG.MTP2014.S242.g12458

Gene model

Harore.CG.MTP2014.S242.g12458

Location

S242 [74,025 / 77,136]

Sequences

Amino acid sequence

Length: 1,036

>Harore.CG.MTP2014.S242.g12458.01.p
MSWFSFTDIAKTALSEAQKKIDKALDIQGAGINQPKSTDIHAQLAEHETDSSLQLLSQYT
DNNSTNHQVKEAKLPSKKKSSRPDSSKNFSTSQTTSKCSKSDVSSDDFFSAFDNELKNSK
SKVVIEPKTTISRSSSYTEVTLSAVSESYDISEITETHSVSGRSSAHEKNTLECEKDVIK
DSENNDTTDQITDTSNQEVDECENSESFELSKPPNIISLGLKEEFIADVPESPSTAASSE
IDILDHESPISEISLTSKFAEGQNLVQSPLSLPITDANDSDVCQIVSPISDANRLITDNS
FQQEEEISSERTSLDIPSHSFQPVKDAELVDYTRGSSCDESTDLTNQRSTEPEVLSDNEG
DSFISNAMEETTYKEKHDTPPKVKDANQYNGVVLSEKLEVYEQQLFNLSCKNAQLCEEND
NLRSEVSRTKEQCEKEASKEVAEVAVSVGNYKKANELLKEEHSNLMKQISVLKSQLAARM
TNEQVQSAMAEKEESIKGLLEEGEKLSKKHLQQNNLIKKQKSQLQERDSELKAAKEKITT
LEIENLKMKQDLQVAHGVGKEEREASMRITDAYEQREREWVLLQEKLSQAEEKERTLQVN
LDAAYVEIRDLRKQNAEQEGKASSERVVLEEELDRVKLLELKKLASEHEHQKQLIMLQIL
ELNNSVSRTEAMAARKDDEHRKELRDIQQRLQESEVRNQDLSESISSATRPLLRQIANLQ
ASHSTQQRSWNALEKTLTTRLNESQSDLLTAQENARMAQSTMIEAKSKTGAYEKQIESNR
KMIAEQMTDIESLNKTLGEYKTKNAMFNKELSNLRKAHQELLSKAKKEKLTLENQLQMEK
VRSEADRKKYTTHQESLQREKERQAWLSRSDINSTSSNLIVETESVASSSEAFQSIDVFE
KKMSTSSLTGLANSSSSDGTLSLSLSNVLENLQTQLKLKEGEIAQLKGEINMLERTRSSM
AEEIVRLTNLTEDMESVSEELKGVEENLQGVEGRYTELLTMYGEMEETNEELRMDLADVK
AMYRQQINDLLKADPS

Nucleotide sequence

Length: 3,111

>Harore.CG.MTP2014.S242.g12458.01.t
ATGAGCTGGTTTTCCTTCACGGACATTGCAAAAACTGCTTTGAGTGAAGCGCAGAAGAAA
ATCGACAAAGCGTTGGATATACAGGGAGCTGGTATAAATCAACCAAAGTCTACAGATATA
CATGCACAACTAGCCGAACATGAAACTGATAGTTCGTTACAGCTACTTTCACAGTACACA
GATAATAATTCAACTAACCACCAAGTGAAGGAAGCAAAACTTCCATCTAAAAAGAAATCA
TCTCGCCCTGACAGTTCGAAAAACTTTTCCACTTCACAAACCACAAGTAAATGCAGCAAG
AGTGATGTGTCATCAGATGATTTCTTTAGTGCCTTCGATAATGAATTGAAGAATAGCAAA
AGCAAAGTGGTGATAGAACCAAAAACAACAATTTCAAGGTCGTCAAGTTACACAGAAGTA
ACACTATCAGCTGTGTCGGAGAGTTATGACATTTCCGAGATCACAGAGACACATTCGGTG
AGTGGAAGATCTTCTGCTCATGAGAAAAACACACTCGAATGTGAAAAAGATGTGATAAAA
GATTCCGAAAATAATGACACCACTGATCAAATTACAGATACGTCAAATCAGGAAGTTGAT
GAATGTGAAAATAGTGAATCCTTTGAATTAAGCAAACCGCCTAACATAATATCTTTAGGT
CTAAAAGAAGAATTTATTGCTGATGTACCTGAGTCTCCGAGTACCGCGGCCTCTAGCGAA
ATAGATATCCTGGATCATGAAAGCCCAATAAGTGAAATATCACTAACATCTAAATTTGCA
GAGGGACAGAACTTAGTACAATCACCGTTATCATTACCCATCACAGACGCTAATGATTCT
GACGTATGCCAGATCGTTTCACCGATATCCGATGCTAACAGACTAATAACTGATAATTCA
TTCCAGCAAGAGGAAGAGATTTCTTCAGAGCGGACCTCTCTAGATATCCCTAGTCACTCA
TTTCAACCTGTAAAAGATGCAGAGCTTGTCGATTATACTCGGGGTTCCTCTTGTGATGAA
AGTACAGATTTGACGAATCAACGATCTACCGAGCCAGAAGTTCTTTCAGATAATGAGGGC
GATTCATTCATTTCAAATGCAATGGAAGAAACTACTTATAAAGAAAAACATGACACTCCA
CCAAAAGTAAAAGATGCAAACCAATATAATGGTGTTGTTTTATCTGAAAAGCTGGAGGTG
TACGAACAGCAGTTATTCAATCTAAGCTGTAAAAATGCACAGCTCTGCGAAGAAAATGAT
AATCTTCGCTCGGAAGTAAGTCGTACGAAAGAGCAGTGCGAAAAAGAAGCGAGTAAGGAA
GTGGCCGAGGTCGCAGTTTCTGTCGGGAATTACAAGAAAGCCAATGAGCTTCTAAAAGAA
GAACATAGCAACCTGATGAAGCAAATATCCGTTCTGAAAAGTCAACTTGCTGCGAGAATG
ACCAACGAACAAGTTCAATCAGCTATGGCTGAGAAGGAAGAATCTATAAAAGGACTGTTG
GAAGAGGGTGAGAAACTTTCGAAAAAACATTTGCAACAAAACAACCTGATCAAGAAACAG
AAATCGCAGCTACAGGAGAGAGACAGCGAGCTCAAAGCGGCAAAAGAGAAAATCACGACT
TTAGAAATTGAAAATCTCAAAATGAAACAAGATTTGCAAGTGGCACATGGTGTTGGTAAA
GAAGAGCGAGAGGCAAGCATGAGAATCACCGACGCCTACGAGCAAAGAGAAAGGGAATGG
GTTTTGCTGCAAGAGAAGCTTTCACAGGCTGAGGAGAAAGAACGAACTTTACAAGTAAAC
CTGGATGCGGCTTATGTGGAGATCCGAGATTTGAGAAAACAGAATGCGGAGCAAGAAGGG
AAGGCCAGTTCGGAGCGGGTAGTTCTCGAAGAAGAACTGGACAGAGTTAAATTACTCGAA
CTAAAAAAATTAGCGAGCGAGCACGAACATCAAAAACAGTTGATCATGTTGCAGATCCTT
GAGCTTAACAATTCAGTCTCTCGTACGGAAGCGATGGCGGCCAGAAAAGATGACGAACAT
CGTAAAGAGCTAAGGGACATACAGCAACGATTGCAAGAATCTGAAGTGCGCAACCAAGAC
CTGAGTGAAAGTATTTCGAGTGCAACAAGACCATTGTTAAGACAAATAGCGAATCTGCAA
GCCTCCCACTCAACCCAGCAGAGATCTTGGAATGCCCTGGAAAAAACTCTGACAACAAGA
CTGAATGAAAGTCAATCGGATCTATTAACCGCTCAAGAAAATGCACGGATGGCACAGAGC
ACCATGATTGAAGCGAAATCAAAAACCGGAGCATATGAAAAACAAATAGAGAGTAACAGA
AAAATGATAGCTGAACAGATGACTGATATCGAGTCTTTGAATAAGACGCTAGGAGAGTAC
AAAACGAAAAACGCGATGTTCAACAAAGAACTTTCCAATTTACGCAAAGCTCATCAAGAG
CTTTTGAGCAAAGCTAAGAAAGAAAAGCTTACATTGGAAAATCAACTGCAGATGGAAAAG
GTGCGGTCGGAGGCAGACCGTAAAAAATACACGACGCATCAGGAGAGTTTACAAAGGGAA
AAAGAACGACAAGCATGGCTTAGTAGGTCTGATATCAATTCGACGTCAAGTAATCTCATT
GTGGAAACAGAATCGGTCGCCAGTTCAAGTGAAGCCTTTCAGTCGATCGATGTCTTTGAG
AAAAAGATGAGCACTTCCTCCTTGACGGGACTGGCAAACAGTTCTTCCTCTGACGGTACA
TTGTCCCTGTCACTCTCCAACGTACTTGAAAACCTGCAGACACAATTGAAACTGAAGGAA
GGAGAAATTGCTCAGTTGAAAGGAGAGATCAACATGTTAGAACGCACGCGCTCTTCGATG
GCCGAAGAAATCGTCAGGTTGACCAATCTGACTGAAGATATGGAAAGCGTCTCTGAAGAG
CTGAAAGGGGTTGAAGAAAATCTACAGGGAGTGGAAGGTAGGTATACAGAGTTGTTAACG
ATGTACGGTGAGATGGAAGAGACGAACGAAGAATTGAGAATGGACCTTGCAGATGTGAAG
GCGATGTACAGACAGCAAATAAATGATCTCTTGAAAGCAGATCCATCGTGA

InterProScan

Pfam
TMF_DNA-bd (IPR022092) - T[485-553] 4.3E-9
Pfam
TMF_TATA-bd (IPR022091) - T[926-1030] 3.2E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value