- Transcript 'Boleac.CG.SB_v3.S150...' >
- Transcript 'KH2012:KH.L18.89.v2....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S240.g12915.02.t
Possible name(s)
DLL1; DLL4
Gene model
Location
S240 [71,456 / 78,163]
Amino acid sequence
Length: 861
>Harore.CG.MTP2014.S240.g12915.02.p
MKLFSMLASGVKDTCMYLQYIDFCYRVTLFVEIAKLFGYHPKSSNELVHNRAKTMLHWTV
YLSLILVSVQVFFSLKEDGTASASGVFELRIEEFVNGAGKDSNGNCCSGFESVKSRICSN
PCRTSFNVCLKHFQSKVKQDSCTYGYYETPVVGHNTFQLTHANSEENIVKLEFTFTWPGA
FSLIVDALHVDERNSSATKPISQVITQGQIGVNSDWRTETHTQNNKALRYSFRVLCDLHY
YGEGCSEYCRPRDDVFGHYTCNRDGKKICLHGWHGSSATNGEYCTKPICREGCNMTNGDC
KDPFECTCKSGWHGDLCDKCRTHPACIHGTCQGIFECNCDSGWGGKFCNLDLIYCSRHKP
CKNEARCKNVEQGSFECDCLSGYTGRDCSTETDECEPNPCRNGGECMDYINKYECRCPQN
YYGVNCQFSNLTCADKPCQNGAECEDQYQQYVCKCPRGYKGVNCETNTQLCPTFPCQNGG
KCERNDKGFVCNCPKLFKGYRCERLITDCNHDLCENGGMCVAGKTGFSCRCKNGFYGAYC
DQIPALCARRPCMNGGICSVIRDRYVCECKPRYDGRNCETEDPCASKPCKNGGECKRHAA
GAYECNCETGFSGIKCEKINFDFVQPGFMRDSENGQKATIYLLSKSERSELSPTQWVAIC
MGSGFLVLIIIILAGCVAYHRQTKSTYIRGTIAKAFSMNGVRNRQVPTPPLIRERHLALR
NIVPAMTEPMSLDPSNLDLVPSIVPASTQAEKMSIKQSKYSSRNSGCWKMQLEEEHTQYS
PDGNQHQKRPTHRRRSDILHYELSDNIQRNRAESSSSHSRCSLKDSSHPPAGILQGDNDL
RLPTYQEACKDEKFSRNVQEN
Nucleotide sequence
Length: 2,586
>Harore.CG.MTP2014.S240.g12915.02.t
ATGAAATTGTTCAGTATGTTAGCATCAGGAGTTAAAGATACATGTATGTACCTCCAGTAT
ATTGATTTTTGTTACCGAGTTACATTATTCGTTGAAATAGCTAAGCTTTTTGGATATCAC
CCAAAGTCTTCGAACGAGCTCGTCCACAACCGAGCTAAAACAATGCTGCACTGGACTGTG
TATTTGTCATTAATACTCGTATCAGTCCAGGTATTTTTTTCGTTGAAGGAAGATGGAACG
GCTTCTGCATCAGGAGTATTCGAACTTAGGATTGAGGAATTTGTGAATGGAGCCGGAAAG
GACAGCAACGGAAATTGTTGTTCGGGTTTTGAATCGGTCAAGTCACGAATCTGCAGCAAT
CCATGCAGAACATCGTTCAATGTATGCCTCAAACATTTCCAATCAAAAGTGAAGCAGGAT
TCGTGTACCTACGGGTATTACGAAACACCTGTAGTCGGACATAATACGTTTCAATTGACA
CACGCTAACAGCGAGGAAAACATCGTTAAGTTAGAGTTTACCTTCACTTGGCCGGGAGCG
TTCTCCTTAATTGTTGACGCCTTACACGTAGACGAAAGAAACTCATCAGCCACGAAACCA
ATATCGCAAGTAATTACGCAAGGACAGATCGGTGTCAACAGCGACTGGAGAACGGAGACC
CACACGCAAAATAACAAGGCACTGCGTTATAGTTTCCGCGTATTGTGCGACTTGCATTAC
TATGGCGAAGGTTGTTCGGAATACTGCCGACCGAGAGACGATGTTTTCGGCCATTATACA
TGCAACAGAGACGGCAAAAAAATCTGCTTGCATGGATGGCATGGGTCGTCTGCTACAAAT
GGTGAATACTGTACCAAACCGATATGCCGCGAAGGATGTAATATGACTAATGGAGACTGC
AAGGACCCATTTGAATGCACGTGCAAATCGGGTTGGCACGGTGATCTATGTGACAAATGT
CGAACACACCCTGCCTGTATACATGGTACTTGTCAAGGCATATTCGAGTGCAACTGTGAT
TCTGGATGGGGAGGAAAATTTTGCAACTTAGATTTGATTTACTGCTCTCGTCATAAACCA
TGCAAGAACGAAGCGCGCTGTAAGAACGTTGAGCAAGGTAGCTTCGAATGTGACTGCTTG
TCCGGCTACACAGGACGCGACTGCTCAACGGAGACTGACGAATGTGAACCAAATCCGTGC
CGGAACGGCGGAGAGTGCATGGATTATATCAACAAGTACGAATGTAGATGCCCACAGAAC
TATTATGGCGTCAATTGCCAATTCAGCAATCTCACGTGTGCCGATAAACCGTGTCAAAAC
GGCGCCGAATGTGAGGACCAGTATCAGCAGTATGTTTGTAAATGTCCGCGGGGATACAAA
GGTGTCAATTGCGAAACCAATACACAACTTTGTCCTACTTTCCCTTGCCAAAACGGTGGC
AAGTGCGAGCGCAACGACAAAGGTTTTGTGTGCAATTGCCCTAAACTGTTCAAAGGGTAC
CGATGCGAACGTCTAATCACCGACTGTAATCACGATCTTTGCGAGAACGGAGGAATGTGC
GTTGCCGGGAAAACTGGTTTCTCTTGCCGATGTAAAAACGGTTTCTACGGTGCTTACTGC
GACCAAATTCCAGCACTATGCGCTCGACGACCTTGCATGAACGGCGGAATATGCTCTGTG
ATACGTGATCGATATGTCTGCGAATGCAAGCCGAGATACGACGGACGAAACTGCGAGACC
GAAGACCCGTGCGCGAGTAAGCCTTGTAAAAATGGCGGAGAATGCAAGAGACATGCAGCA
GGCGCATACGAATGCAACTGTGAAACGGGTTTCAGCGGCATTAAATGCGAAAAAATAAAT
TTCGATTTCGTGCAGCCCGGGTTTATGAGGGATTCGGAGAACGGCCAGAAAGCTACCATC
TATCTGCTATCCAAAAGCGAACGGAGCGAGCTCAGTCCAACGCAATGGGTTGCTATTTGT
ATGGGGTCGGGGTTCCTCGTGTTAATTATCATTATATTGGCTGGATGCGTTGCGTATCAT
CGTCAAACCAAATCCACCTACATTCGTGGAACCATAGCCAAAGCTTTTTCAATGAACGGC
GTGAGGAACCGACAGGTACCCACTCCTCCTTTGATTCGCGAGCGCCATCTAGCGCTTAGA
AACATCGTACCCGCCATGACTGAGCCTATGAGCCTCGATCCGAGCAACCTTGATTTGGTA
CCGAGCATTGTTCCTGCTTCAACACAAGCTGAAAAAATGTCGATTAAACAATCCAAATAT
TCATCAAGAAACTCGGGATGTTGGAAAATGCAACTGGAAGAGGAACACACACAGTATTCA
CCAGATGGAAATCAACATCAGAAACGTCCTACCCACAGACGCAGATCTGATATCTTACAT
TATGAATTATCCGATAACATTCAGCGGAATAGAGCAGAATCTTCATCAAGTCACAGCAGA
TGTTCTTTGAAAGACTCTTCTCATCCTCCTGCAGGCATTCTTCAAGGCGATAATGATTTG
CGGCTTCCGACGTATCAAGAAGCTTGCAAAGATGAAAAATTCTCTAGAAATGTTCAAGAA
AACTAG
| Pfam |
Notch_ligand_N (IPR011651) - T[84-157] 1.2E-22 |
| SMART |
DSL (IPR001774) - T[216-284] 1.3E-22 |
| Pfam |
DSL (IPR001774) - T[216-276] 6.1E-23 |
| ProSiteProfiles |
DSL (IPR001774) - T[234-278] 14.331 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[285-318] 7.36 - T[351-389] 19.517 - T[391-427] 22.472 - T[429-465] 18.784 - T[467-503] 15.946 - T[505-541] 16.491 - T[543-579] 17.44 - T[580-617] 18.755 |
| SMART |
EGF-like_dom (IPR000742) - T[288-318] 2.1 - T[319-349] 2.9 - T[354-389] 3.5E-4 - T[394-427] 1.3E-5 - T[432-465] 2.5E-6 - T[470-503] 2.8E-4 - T[508-541] 4.1E-4 - T[546-579] 5.6E-5 - T[583-617] 6.9E-5 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[306-317] . - T[337-348] . - T[337-348] . - T[377-388] . - T[377-388] . - T[415-426] . - T[453-464] . - T[453-464] . - T[491-502] . - T[529-540] . - T[529-540] . - T[567-578] . - T[605-616] . - T[605-616] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[339-471] 9.57E-9 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[351-389] 3.7E-4 - T[391-427] 7.9E-7 - T[433-465] 0.0048 - T[467-503] 0.013 - T[508-541] 0.07 - T[547-579] 0.14 - T[580-617] 0.0087 |
| Pfam |
EGF-like_dom (IPR000742) - T[355-386] 7.9E-6 - T[395-424] 1.7E-6 - T[433-462] 1.9E-5 - T[509-539] 5.3E-5 - T[547-577] 7.0E-6 - T[584-614] 1.9E-6 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[391-415] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[406-417] . - T[444-455] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| JAG1_HUMAN | 35.855 % | 371 | 3.18E-112 |
| DLL1_HUMAN | 41.419 % | 467 | 1.55E-153 |
| DLL4_HUMAN | 43.359 % | 421 | 3.43E-136 |