- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C9.709.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S240.g12915.01.t
Possible name(s)
DLL1; DLL4
Gene model
Location
S240 [71,456 / 77,277]
Amino acid sequence
Length: 794
>Harore.CG.MTP2014.S240.g12915.01.p
MYCRCTLCMGSWKASASGVFELRIEEFVNGAGKDSNGNCCSGFESVKSRICSNPCRTSFN
VCLKHFQSKVKQDSCTYGYYETPVVGHNTFQLTHANSEENIVKLEFTFTWPGAFSLIVDA
LHVDERNSSATKPISQVITQGQIGVNSDWRTETHTQNNKALRYSFRVLCDLHYYGEGCSE
YCRPRDDVFGHYTCNRDGKKICLHGWHGSSATNGEYCTKPICREGCNMTNGDCKDPFECT
CKSGWHGDLCDKCRTHPACIHGTCQGIFECNCDSGWGGKFCNLDLIYCSRHKPCKNEARC
KNVEQGSFECDCLSGYTGRDCSTETDECEPNPCRNGGECMDYINKYECRCPQNYYGVNCQ
FSNLTCADKPCQNGAECEDQYQQYVCKCPRGYKGVNCETNTQLCPTFPCQNGGKCERNDK
GFVCNCPKLFKGYRCERLITDCNHDLCENGGMCVAGKTGFSCRCKNGFYGAYCDQIPALC
ARRPCMNGGICSVIRDRYVCECKPRYDGRNCETEDPCASKPCKNGGECKRHAAGAYECNC
ETGFSGIKCEKINFDFVQPGFMRDSENGQKATIYLLSKSERSELSPTQWVAICMGSGFLV
LIIIILAGCVAYHRQTKSTYIRGTIAKAFSMNGVRNRQVPTPPLIRERHLALRNIVPAMT
EPMSLDPSNLDLVPSIVPASTQAEKMSIKQSKYSSRNSGCWKMQLEEEHTQYSPDGNQHQ
KRPTHRRRSDILHYELSDNIQRNRAESSSSHSRCSLKDSSHPPAGILQGDNDLRLPTYQE
ACKDEKFSRNVQEN
Nucleotide sequence
Length: 2,385
>Harore.CG.MTP2014.S240.g12915.01.t
ATGTACTGTAGGTGCACATTGTGTATGGGTTCTTGGAAAGCTTCTGCATCAGGAGTATTC
GAACTTAGGATTGAGGAATTTGTGAATGGAGCCGGAAAGGACAGCAACGGAAATTGTTGT
TCGGGTTTTGAATCGGTCAAGTCACGAATCTGCAGCAATCCATGCAGAACATCGTTCAAT
GTATGCCTCAAACATTTCCAATCAAAAGTGAAGCAGGATTCGTGTACCTACGGGTATTAC
GAAACACCTGTAGTCGGACATAATACGTTTCAATTGACACACGCTAACAGCGAGGAAAAC
ATCGTTAAGTTAGAGTTTACCTTCACTTGGCCGGGAGCGTTCTCCTTAATTGTTGACGCC
TTACACGTAGACGAAAGAAACTCATCAGCCACGAAACCAATATCGCAAGTAATTACGCAA
GGACAGATCGGTGTCAACAGCGACTGGAGAACGGAGACCCACACGCAAAATAACAAGGCA
CTGCGTTATAGTTTCCGCGTATTGTGCGACTTGCATTACTATGGCGAAGGTTGTTCGGAA
TACTGCCGACCGAGAGACGATGTTTTCGGCCATTATACATGCAACAGAGACGGCAAAAAA
ATCTGCTTGCATGGATGGCATGGGTCGTCTGCTACAAATGGTGAATACTGTACCAAACCG
ATATGCCGCGAAGGATGTAATATGACTAATGGAGACTGCAAGGACCCATTTGAATGCACG
TGCAAATCGGGTTGGCACGGTGATCTATGTGACAAATGTCGAACACACCCTGCCTGTATA
CATGGTACTTGTCAAGGCATATTCGAGTGCAACTGTGATTCTGGATGGGGAGGAAAATTT
TGCAACTTAGATTTGATTTACTGCTCTCGTCATAAACCATGCAAGAACGAAGCGCGCTGT
AAGAACGTTGAGCAAGGTAGCTTCGAATGTGACTGCTTGTCCGGCTACACAGGACGCGAC
TGCTCAACGGAGACTGACGAATGTGAACCAAATCCGTGCCGGAACGGCGGAGAGTGCATG
GATTATATCAACAAGTACGAATGTAGATGCCCACAGAACTATTATGGCGTCAATTGCCAA
TTCAGCAATCTCACGTGTGCCGATAAACCGTGTCAAAACGGCGCCGAATGTGAGGACCAG
TATCAGCAGTATGTTTGTAAATGTCCGCGGGGATACAAAGGTGTCAATTGCGAAACCAAT
ACACAACTTTGTCCTACTTTCCCTTGCCAAAACGGTGGCAAGTGCGAGCGCAACGACAAA
GGTTTTGTGTGCAATTGCCCTAAACTGTTCAAAGGGTACCGATGCGAACGTCTAATCACC
GACTGTAATCACGATCTTTGCGAGAACGGAGGAATGTGCGTTGCCGGGAAAACTGGTTTC
TCTTGCCGATGTAAAAACGGTTTCTACGGTGCTTACTGCGACCAAATTCCAGCACTATGC
GCTCGACGACCTTGCATGAACGGCGGAATATGCTCTGTGATACGTGATCGATATGTCTGC
GAATGCAAGCCGAGATACGACGGACGAAACTGCGAGACCGAAGACCCGTGCGCGAGTAAG
CCTTGTAAAAATGGCGGAGAATGCAAGAGACATGCAGCAGGCGCATACGAATGCAACTGT
GAAACGGGTTTCAGCGGCATTAAATGCGAAAAAATAAATTTCGATTTCGTGCAGCCCGGG
TTTATGAGGGATTCGGAGAACGGCCAGAAAGCTACCATCTATCTGCTATCCAAAAGCGAA
CGGAGCGAGCTCAGTCCAACGCAATGGGTTGCTATTTGTATGGGGTCGGGGTTCCTCGTG
TTAATTATCATTATATTGGCTGGATGCGTTGCGTATCATCGTCAAACCAAATCCACCTAC
ATTCGTGGAACCATAGCCAAAGCTTTTTCAATGAACGGCGTGAGGAACCGACAGGTACCC
ACTCCTCCTTTGATTCGCGAGCGCCATCTAGCGCTTAGAAACATCGTACCCGCCATGACT
GAGCCTATGAGCCTCGATCCGAGCAACCTTGATTTGGTACCGAGCATTGTTCCTGCTTCA
ACACAAGCTGAAAAAATGTCGATTAAACAATCCAAATATTCATCAAGAAACTCGGGATGT
TGGAAAATGCAACTGGAAGAGGAACACACACAGTATTCACCAGATGGAAATCAACATCAG
AAACGTCCTACCCACAGACGCAGATCTGATATCTTACATTATGAATTATCCGATAACATT
CAGCGGAATAGAGCAGAATCTTCATCAAGTCACAGCAGATGTTCTTTGAAAGACTCTTCT
CATCCTCCTGCAGGCATTCTTCAAGGCGATAATGATTTGCGGCTTCCGACGTATCAAGAA
GCTTGCAAAGATGAAAAATTCTCTAGAAATGTTCAAGAAAACTAG
| Pfam |
Notch_ligand_N (IPR011651) - T[17-90] 1.1E-22 |
| Pfam |
DSL (IPR001774) - T[149-209] 5.5E-23 |
| SMART |
DSL (IPR001774) - T[149-217] 1.3E-22 |
| ProSiteProfiles |
DSL (IPR001774) - T[167-211] 14.331 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[218-251] 7.36 - T[284-322] 19.517 - T[324-360] 22.472 - T[362-398] 18.784 - T[400-436] 15.946 - T[438-474] 16.491 - T[476-512] 17.44 - T[513-550] 18.755 |
| SMART |
EGF-like_dom (IPR000742) - T[221-251] 2.1 - T[252-282] 2.9 - T[287-322] 3.5E-4 - T[327-360] 1.3E-5 - T[365-398] 2.5E-6 - T[403-436] 2.8E-4 - T[441-474] 4.1E-4 - T[479-512] 5.6E-5 - T[516-550] 6.9E-5 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[239-250] . - T[270-281] . - T[270-281] . - T[310-321] . - T[310-321] . - T[348-359] . - T[386-397] . - T[386-397] . - T[424-435] . - T[462-473] . - T[462-473] . - T[500-511] . - T[538-549] . - T[538-549] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[272-404] 7.22E-9 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[284-322] 3.7E-4 - T[324-360] 7.9E-7 - T[366-398] 0.0048 - T[400-436] 0.013 - T[441-474] 0.07 - T[480-512] 0.14 - T[513-550] 0.0087 |
| Pfam |
EGF-like_dom (IPR000742) - T[288-319] 7.2E-6 - T[328-357] 1.6E-6 - T[366-395] 1.8E-5 - T[442-472] 4.8E-5 - T[480-510] 6.4E-6 - T[517-547] 1.7E-6 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[324-348] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[339-350] . - T[377-388] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| JAG1_HUMAN | 35.855 % | 370 | 1.3E-112 |
| DLL1_HUMAN | 41.419 % | 466 | 6.86E-154 |
| DLL4_HUMAN | 43.275 % | 420 | 8.39E-137 |