- Clone 'AHC0AAA92YP09' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S23.g03895.02.t
Possible name(s)
EIF4A1; EIF4A2; EIF4A3
Gene model
Location
S23 [426,727 / 430,604]
Amino acid sequence
Length: 412
>Harore.CG.MTP2014.S23.g03895.02.p
MAARSTNRNPQQQQQRRGNPENDLSKVEFETSEEVAVTPTFDMMNLRDDLVRGIYAYGFE
KPSAIQQRAIKPITKGRDVIAQSQSGTGKTATFAISCLQMIDTTVRETQALILAPTRELA
QQIQKVILALGDYMSVQCHSCIGGTNVGEDIRKLDYGQHIVSGTPGRVFDMIRRRSLRTR
SIKLLVLDESDEMLNKGFKEQIYDVYRYLPPAIQVVLISATLPHEILEMTNKFMTDPIRI
LVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE
ANFTVSSMHGEMPQKERTEIMKEFRSGSSRVLICTDVWARGLDVPQVSLIINYDLPNNRE
LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVAELI
Nucleotide sequence
Length: 2,455
>Harore.CG.MTP2014.S23.g03895.02.t
AGTGTTCTTAATTGTTCTATTGCTAAATTATCATGGCTGCCCGTAGTACGAACCGAAATC
CTCAGCAGCAGCAGCAGAGAAGGGGCAATCCAGAAAATGATCTGAGCAAAGTTGAATTCG
AAACTTCGGAAGAAGTTGCAGTAACGCCTACATTCGATATGATGAATCTACGTGATGATC
TTGTCCGTGGAATTTATGCTTACGGTTTCGAGAAACCTTCGGCAATCCAACAGAGAGCTA
TCAAGCCTATCACAAAAGGCCGTGATGTCATTGCACAGTCACAATCAGGAACTGGAAAAA
CAGCAACATTCGCAATATCTTGCTTGCAAATGATTGACACAACTGTGAGAGAAACACAGG
CATTGATTCTTGCTCCAACTAGAGAACTTGCCCAACAAATCCAGAAGGTTATCCTAGCAT
TGGGAGATTACATGTCTGTCCAATGTCATTCCTGCATCGGTGGAACTAACGTAGGCGAGG
ATATCAGAAAGCTCGACTATGGTCAGCACATAGTTTCCGGAACGCCAGGCAGAGTCTTTG
ATATGATTAGACGTCGCAGTCTACGCACAAGGTCTATAAAACTCTTGGTGCTTGATGAGT
CGGATGAAATGCTTAATAAAGGATTCAAGGAACAGATCTATGATGTTTACAGATATCTTC
CTCCTGCCATACAAGTTGTCCTTATCAGTGCTACTCTCCCTCACGAAATCTTGGAAATGA
CAAATAAGTTCATGACGGATCCCATTCGTATTCTTGTTAAACGTGATGAACTGACACTCG
AGGGAATCAAGCAGTTCTTTGTTGCTGTGGAGAAAGAAGAATGGAAATTCGACACACTCT
GCGATCTTTATGACACTCTAACCATCACACAGGCCGTCATTTTCTGCAATACCAAACGTA
AGGTGGATTGGCTCACGGAAAAAATGCGCGAGGCGAACTTCACAGTTTCTTCAATGCACG
GTGAAATGCCGCAAAAAGAAAGAACAGAAATTATGAAGGAATTTAGATCTGGTTCTAGTC
GAGTATTAATCTGCACTGACGTATGGGCTAGAGGATTGGATGTTCCCCAAGTGTCGTTGA
TTATCAACTACGACCTCCCCAACAACCGTGAATTGTACATTCATCGTATCGGACGTTCAG
GAAGGTACGGGAGAAAGGGTGTCGCCATCAACTTTGTCAAGAATGATGACATCCGGATCC
TGAGAGACATTGAACAGTACTACAGTACGCAGATCGATGAAATGCCTATGAATGTTGCTG
AACTTATCTGATCATGCAACTGTTGAAGACTACATGAAGTAACAGCGAAGGTATAATTGT
TTTTTAACTGTTTATGATAGCAGTGAACACTGACTACGGAATACGTTTCCATGCTTCATT
TCGTTTTTGTTTCATCCATAGCTGCTAAGCATGGCTCCCTTGGTAGATCTATTCTTTGTA
ATTAAACCTTTTTGAAGGAATGCTCCTCTCTTGTAATTTGTTTCTTGTGCATCTGCACAT
TTTACTTATCTTTGTATAAGGATATCTCATCATCCAGGGTCACTTGGATGGATTTTAGTT
CGGGATTTGTACAGCTCATTTGCTATAAATAAAATTGTACCATTACAAGGTTTGTTGTTA
GATTTTCAACACACTCCAGTTGTACAATACAGACAAGAATTTAGTTGTGACACCAAAATA
ATACAACTTTGTATGAAAGACTTGTTTATTTCATATAAATGTGTATTAAACTTATTAAAT
TAAGAAGGATGACATGGTTGGTTCAAACAAATGTTTCATGCGCTTTTTTCTCCGCATCCC
ATGATGAAAGGCTGCTTCTTTCTCTGTAAACATCATATTCCTAGTAAGGTATTTAATTTC
TGGAAGGTTGTGAAGCTTTTTTTCAAATTTGATTTACCTGGCTGAATATATTCCGCTGTC
TTCTGTAAGGCTTGCATTGTCGATTGATACATACTAGAACGATACATAATGTATGGTTAA
GAAAAGAAATGCAGTATGTATATTATATTTCTGAAAGATCAGACCACTTACCTGGTTGTG
TATGCAACAGTAGGGTAAATGGGCATGACTTAATATTGAGTAATCAAGGTAACTTCCTTT
GACATCGTTGATTCTATGGCAGTTTCTGCAAAGACATGGGTACTTTTTGTCTCTGTAAGT
TTCCCTTATACAGTGTGTACAATAATCTTCAGTTTTTTTCGAAGTGAAAATATCACAAAA
ATTTGTCTGGCATTTCGTGCAGATATCGGAGTTTTCATCTTCTCCATGTTTTTGATTTGG
TAGGTCAGTTAGTGCTTTCTCTGATGTTTTGGTGTCATGATTCGTTTCACTTTCTGAGTC
CTTAGGAAGGTATTTATCACTTGTCAAATCTATAACTGTTTCCACCGATCCACTTGTATC
CTCGAAGCAAGATGTTGGAGATTCTCGTCTTGGAAAAAATTGATAGTTTTAATGA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[39-67] 9.657 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[58-255] 2.6E-59 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[64-226] 1.1E-41 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[70-240] 29.811 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[107-395] 3.06E-75 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[251-412] 27.374 |
| CDD |
Helicase_C (IPR001650) - T[252-381] 4.61548E-46 |
| Pfam |
Helicase_C (IPR001650) - T[265-373] 5.6E-32 |
| SMART |
Helicase_C (IPR001650) - T[292-373] 1.3E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 90.201 % | 752 | 0 |
| IF4A1_HUMAN | 69.761 % | 528 | 0 |
| IF4A2_HUMAN | 71.088 % | 533 | 0 |