- EST 'AHC0AAA68YF09_RM1' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S230.g12581.01.t
Possible name(s)
RPS20
Gene model
Location
S230 [53,487 / 53,847]
Amino acid sequence
Length: 119
>Harore.CG.MTP2014.S230.g12581.01.p
MSVYKEGKPPAGDEAPIHKIRITLTSRNVVSLEKVCADLIRGAKDKQLRVKGPVRMPTKI
LRITCRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADV
Nucleotide sequence
Length: 360
>Harore.CG.MTP2014.S230.g12581.01.t
ATGAGCGTATACAAGGAAGGTAAACCTCCGGCCGGAGACGAGGCGCCAATCCATAAAATT
AGGATTACCCTTACTTCGAGGAATGTAGTGAGCCTCGAAAAGGTCTGTGCCGATTTGATA
AGAGGCGCCAAAGACAAGCAATTGCGCGTCAAAGGACCCGTCCGTATGCCAACCAAAATA
CTACGTATCACTTGTCGTAAGACACCTTGCGGAGAAGGTTCCAAAACCTGGGATCGCTTC
CAAATGAGGATCCACAAGCGTTTGATAGACCTCCACAGCCCGTCTGAAATCGTGAAGCAG
ATCACGTCAATTAGCATCGAACCTGGAGTCGAGGTTGAAGTAACAATCGCTGATGTTTGA
| Gene3D |
Ribosomal_S10_dom_sf (IPR036838) - T[3-118] 3.1E-53 |
| PANTHER |
Ribosomal_S10 (IPR001848) - T[4-118] 2.8E-61 |
| Hamap |
Ribosomal_S10 (IPR001848) - T[17-116] 18.39 |
| TIGRFAM |
Ribosomal_S10_euk/arc (IPR005729) - T[18-116] 7.8E-44 |
| PRINTS |
Ribosomal_S10 (IPR001848) - T[19-32] 2.1E-12 - T[54-69] 2.1E-12 - T[76-90] 2.1E-12 |
| SUPERFAMILY |
Ribosomal_S10_dom_sf (IPR036838) - T[19-116] 1.1E-32 |
| SMART |
Ribosomal_S10_dom (IPR027486) - T[21-115] 2.6E-42 |
| Pfam |
Ribosomal_S10_dom (IPR027486) - T[21-115] 2.8E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS20_HUMAN | 84.746 % | 200 | 3.86E-68 |