- Transcript 'Cisavi.CG.ENS81.R4.4...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S230.g04836.01.t
Possible name(s)
KATNB1; NWD1; NWD2
Gene model
Location
S230 [68,773 / 79,781]
Amino acid sequence
Length: 1,987
>Harore.CG.MTP2014.S230.g04836.01.p
MRPKPDGSKEDNLSYLPPIWNISTKVERPYTDRILNRRSDARKNLSYKNDQKIIEHLRQK
LNRKDESNLSASCIASQRNDQATKNVHRDLSPEKTCILTERVDSHIATNGTTSSSMSKGT
SRRTLSPYDSMNSQLVLPSIVIDEHDSVFYEEQDATATSDVVTRTISTPGIFVDWKSDDS
SDFEEVFRSEEEFTESNASDIHVSLESRNEQKIGSSGSESKLSGRELVHSVVLGNIHQNL
PENSKNVKIYLSHGGISKETEQKIFMTEVFPRISQLCRGLGLSFEVVDVGYEAAGTKIAI
HHMLDALKTSLGTAFVSFIPDDLDAESEAPPTFVPSDIMKKIFNIIQLKIVAIEASIFCQ
KTNKLSVSGNDEAEPKALLDILEKKVEHCQRNRELIMKCYDLDSNTIPEEFVLRQRNISS
LETVKLCLALKTYSKRLHADPSVRKWRDHALRTSSSRENLTALNESKDPRNNCVWFCQKH
SRMGGSLPSESHSKNSREVTLKSTLKSRLSCNNLQTYQLVKNEQSETNWKKGKKSDLEKI
KHKQSEKFSFDIYNRISVQVKRALEAEEENSTITQNNDELIEHVRFMGQANRDFIGREDV
LEEIKSYILSDGKRSPMVIYGEPGCGKTSVLCAAAKQCRIWINNGSKLPSIGIHRHARPS
VVAANFHKKIQQPIIIFRSVGVTGETKSLTFLIRDITRQLETIYKTRREEDNISHQRLFS
DIPSHSLSNLAAFLSRHRQFVLLFIDNLSAATDVKNRYSLSWLPKTLPKYFKVVLSFTCN
GKIDPRACEISTPKSLFEACWQQYKDDLNLVKIPPLAFQETLQSVDLGRPTKGLDLLLSF
LSQNERKITKEQQRVIMRTANSCTTPLALKLLVGIARHWKSYTPPENIINDMSGWGSHIR
DFICHFLSVVASKHNQNVFRAFTCFITCSKNGLTHQEIVDLISMDEIVTTLLLGGGMAVP
QDKEDRKTSLSKSRKDNKTVKAISSGRCDTVCQITRMWYLLHQDLEPFLMETLTDNVKTI
KWRHAIFAEQIMNMFMSEPKDLRHFHVIMTSYFSNEPSQCKCGSIHDCGQPLQWSVGSHT
TLNQRRLSESIFHARLCADIESIKRKMIFDLNWLQAKLDATSIECLLTDIYEVLKMVSND
KDINLLVDALFLSQDVLRHDPRELPSQLLGRLHDIIEKDVPLAPQDPRLYPYTRLLLSQI
RRSKRYFLMPTKTCLTSGKQIIFDPLHGSDDVITALASCTDGQRIVTAAKDSTIKMWDII
SRRVLRTIENVGRDVITMCVCMGNYFVATLHRNSRVNVWSFRQCLCIFSISCYTNEDRLL
ITIVSDGQLLATLSQKSMTMRVWDLDKLCFTREMNIASEEVDANNLTVARNSRGNNVFLG
YLGHSEAITVNAKRGKIVRTIKCKDGRITQVESSRDYYIIGCRKKKMEVHELQHFYLHDS
INYSLVRVIKACVNDTIYDMFVNRLGSHLIGLSSNVDGESEIVVWSMENDAHRHMVKNKG
KFIAGTCIDLQYCITAGESENVVRIHNLAAQFDKHTHSRTQVKKKVDGIGRLFNLPEKDK
YVVAQGIGGSPITVWNVTRSRCRGEAVIIERGLLDKNDIVIVKDMLVVILSDRGIATMRG
RSENIFETIYVYNLLLRKYERKLHPVQINMCPPDQYHVIGNDKLIGTSSDHLHLVVWSII
TGKILYTILPDFSCYQQEEKILHDKKRRRRPKLRNYSMVPIQPKNTDAKRTTWKKYRVTK
EEQQQAIFEMVVSGDESTLLCSYYSRHIVVFNLKKRLHKHTLTDKHSILNLHKAILTTDG
KHLLMTNYDSASHYTYITLWDLELGNVSRRRRNEPKVCALAMTDDASRVAFATEDNYLKI
WDPFRRSSHRSIPGYSGLEMANPPNDCCQSTTLYLTMGGKRAILYANSLSVWDLEAENVL
MVFTPDVKFQCCTVALGGQVIVVGMRDSSNIITMRVKPSGSNHVADRDIFGERNESSDDD
TSDDEIS
Nucleotide sequence
Length: 6,212
>Harore.CG.MTP2014.S230.g04836.01.t
ATGCGACCGAAGCCGGATGGATCTAAGGAGGACAACTTATCTTATTTACCCCCTATCTGG
AATATAAGCACCAAAGTCGAACGACCATATACCGATCGCATCTTGAACAGAAGGAGTGAC
GCGAGAAAAAATCTTAGTTATAAAAACGATCAGAAAATTATTGAACATCTTCGGCAAAAG
TTGAATCGCAAAGACGAAAGCAATTTGTCAGCATCCTGTATAGCTAGTCAACGTAATGAC
CAGGCAACGAAAAATGTCCATCGCGATCTCTCGCCTGAAAAAACATGTATCCTCACGGAA
AGAGTAGATTCTCACATAGCGACAAACGGAACTACCAGCAGCAGCATGTCAAAGGGCACC
AGCAGACGAACATTGTCACCTTATGACAGTATGAACAGCCAGCTTGTTCTTCCATCAATC
GTCATAGATGAGCATGATTCGGTCTTCTATGAAGAGCAAGATGCCACCGCAACATCAGAT
GTTGTCACTCGAACAATTTCGACTCCCGGAATATTCGTTGATTGGAAGAGCGATGACAGT
AGCGATTTTGAAGAAGTCTTCAGATCTGAAGAGGAATTCACAGAATCCAATGCATCGGAT
ATTCACGTTAGTTTAGAGTCGAGGAATGAACAGAAAATTGGTAGCAGTGGATCAGAATCA
AAATTATCAGGAAGAGAACTTGTTCACTCTGTAGTTCTGGGAAATATACATCAGAATCTC
CCAGAAAACAGCAAAAATGTTAAAATATATTTGAGTCACGGCGGAATCAGTAAGGAAACG
GAACAAAAAATCTTCATGACTGAGGTGTTTCCACGAATATCACAGCTATGTCGAGGCTTG
GGACTGTCTTTTGAGGTCGTGGATGTGGGTTATGAAGCTGCTGGGACTAAAATAGCTATC
CATCATATGTTAGATGCATTGAAGACAAGTCTAGGAACCGCATTTGTGAGTTTTATTCCC
GATGATTTGGATGCTGAGAGTGAAGCACCTCCAACATTTGTGCCTAGTGACATCATGAAA
AAAATATTTAACATCATCCAGCTTAAGATAGTGGCAATAGAAGCGAGTATTTTCTGTCAA
AAAACAAACAAGCTTTCCGTATCTGGCAATGATGAAGCTGAACCCAAAGCATTGTTGGAT
ATTCTTGAAAAAAAAGTTGAGCATTGCCAACGAAACAGAGAGTTGATCATGAAGTGTTAT
GATTTGGACTCTAATACAATTCCCGAAGAGTTTGTACTTAGGCAAAGGAACATAAGCTCA
CTGGAGACAGTCAAACTCTGTCTAGCTTTGAAAACATATAGCAAGAGGTTACATGCTGAC
CCGAGTGTTAGGAAATGGAGGGATCATGCCTTGCGGACATCGTCAAGTAGAGAGAATTTG
ACTGCACTAAATGAATCGAAGGATCCGAGAAACAATTGTGTTTGGTTTTGTCAAAAGCAT
TCTCGTATGGGAGGATCGCTCCCGAGTGAATCTCACAGTAAAAACTCGAGAGAAGTTACC
CTGAAAAGCACGTTGAAAAGCAGGCTTAGTTGCAACAACCTGCAAACATATCAGCTTGTA
AAAAATGAGCAATCTGAAACAAACTGGAAAAAGGGAAAGAAATCTGATCTTGAAAAAATA
AAACATAAACAATCTGAGAAGTTCTCCTTTGATATCTACAATAGAATATCCGTTCAAGTC
AAAAGAGCTCTCGAGGCTGAGGAAGAGAATTCAACTATCACTCAAAACAATGATGAGCTG
ATTGAACATGTAAGATTCATGGGCCAAGCTAACAGAGATTTCATCGGCAGGGAAGACGTC
TTAGAAGAAATTAAAAGCTACATTCTTTCTGATGGAAAAAGGTCTCCAATGGTGATATAT
GGAGAGCCAGGTTGTGGGAAGACTTCAGTCTTATGTGCTGCTGCGAAGCAATGCAGAATA
TGGATTAATAATGGTTCGAAACTACCGTCTATCGGCATACACCGACATGCGAGGCCATCC
GTTGTAGCTGCAAATTTCCACAAAAAAATACAGCAACCTATCATCATATTCAGGAGCGTT
GGAGTGACCGGAGAAACAAAATCACTGACATTTCTTATTCGCGACATTACGCGACAACTA
GAAACTATTTACAAAACCCGAAGAGAAGAAGACAATATTTCGCATCAGCGCTTATTTTCT
GATATACCCTCCCATTCCTTGAGCAACCTTGCAGCCTTCCTCAGTCGACACAGGCAATTC
GTTTTGCTCTTTATTGACAATCTTAGTGCGGCTACTGATGTCAAGAATAGATACTCACTG
TCTTGGCTACCAAAAACCCTTCCAAAATATTTCAAAGTCGTCTTATCATTCACATGCAAT
GGGAAAATCGACCCTCGTGCTTGCGAAATCTCTACACCGAAGAGTTTGTTTGAAGCTTGC
TGGCAACAATACAAGGACGATTTGAATTTAGTCAAAATTCCACCGTTAGCTTTTCAGGAA
ACCTTGCAATCAGTTGACTTAGGAAGACCTACGAAAGGACTCGATTTATTGCTTTCGTTC
TTGAGTCAAAATGAGCGAAAAATAACTAAGGAGCAACAGAGAGTAATCATGAGAACCGCT
AACTCATGCACAACACCTTTAGCGTTAAAATTGCTTGTGGGAATCGCCCGTCATTGGAAG
TCTTACACACCCCCGGAAAACATCATCAATGACATGTCAGGATGGGGTTCGCACATCCGT
GATTTCATCTGTCATTTTCTTTCTGTTGTTGCTTCTAAGCACAACCAAAATGTGTTTAGA
GCATTTACTTGTTTCATTACATGCTCAAAAAATGGTCTGACTCATCAAGAGATCGTAGAT
CTTATTTCAATGGATGAAATAGTAACCACGCTCTTGCTAGGAGGAGGAATGGCCGTACCT
CAAGATAAAGAAGACAGAAAAACATCGCTTAGCAAATCAAGGAAGGACAATAAAACGGTG
AAGGCAATTAGTTCGGGAAGATGCGATACGGTGTGCCAGATTACGAGAATGTGGTATCTT
CTACACCAAGATCTAGAGCCTTTTCTCATGGAAACCCTCACCGATAATGTCAAAACCATC
AAATGGCGGCATGCGATCTTTGCTGAGCAAATTATGAATATGTTCATGTCAGAGCCAAAA
GACCTACGTCATTTTCATGTGATCATGACATCCTATTTTTCCAATGAACCTTCCCAGTGC
AAATGTGGGTCTATTCACGACTGCGGGCAACCTTTGCAGTGGTCTGTTGGCTCTCACACT
ACACTGAATCAGCGACGGTTGAGCGAATCTATATTTCATGCGAGGCTCTGCGCTGACATT
GAATCGATCAAGCGTAAAATGATCTTTGACCTAAACTGGCTTCAGGCAAAACTGGATGCA
ACTTCAATCGAATGTTTGCTTACTGATATATATGAAGTGCTGAAAATGGTTTCCAATGAT
AAGGATATCAACCTGTTGGTGGATGCCTTGTTTTTGTCTCAGGACGTGTTACGTCATGAC
CCTCGTGAACTTCCATCTCAGTTGCTTGGTCGTCTGCATGACATAATCGAAAAAGATGTA
CCCCTCGCCCCACAAGATCCACGACTATATCCGTATACCCGGTTGCTTCTTTCACAAATA
CGACGCTCCAAGCGATACTTCCTAATGCCGACAAAAACGTGTCTGACATCTGGAAAGCAA
ATTATCTTCGATCCACTTCATGGTTCTGATGATGTCATCACCGCTCTTGCGTCGTGTACC
GACGGACAGCGTATAGTTACTGCAGCGAAAGATTCAACTATCAAGATGTGGGACATTATA
TCCAGACGTGTTCTTCGAACTATTGAGAATGTTGGCAGAGATGTGATTACTATGTGTGTG
TGCATGGGAAATTACTTTGTTGCCACACTTCACAGAAATAGTAGAGTGAATGTTTGGAGC
TTTCGTCAATGCTTGTGCATATTTTCTATCTCTTGCTATACGAATGAAGACAGATTGCTC
ATCACAATTGTCTCAGATGGCCAACTTTTGGCAACACTTTCTCAAAAGTCAATGACAATG
CGTGTTTGGGACTTGGATAAACTCTGCTTTACTCGTGAAATGAACATCGCATCAGAGGAG
GTTGACGCAAACAATCTGACGGTTGCTCGAAATTCTCGGGGTAACAATGTGTTCCTCGGT
TACCTCGGACACTCCGAAGCTATTACTGTCAATGCCAAGCGAGGGAAGATTGTAAGAACT
ATCAAGTGTAAGGATGGTCGTATAACTCAAGTGGAATCTTCGCGCGATTATTATATCATC
GGGTGTCGTAAAAAAAAGATGGAAGTACATGAACTCCAGCATTTCTACCTCCATGACAGC
ATTAATTACAGTCTTGTGCGCGTCATCAAGGCTTGTGTTAATGATACGATTTACGACATG
TTTGTTAACCGTCTCGGCTCTCATTTGATCGGACTGTCTTCAAATGTAGACGGTGAAAGC
GAGATTGTTGTTTGGAGCATGGAGAATGATGCACACAGACATATGGTGAAGAACAAGGGA
AAATTTATTGCAGGCACTTGCATTGATCTCCAATACTGCATAACCGCCGGAGAGTCAGAA
AACGTTGTTCGGATCCATAACCTTGCCGCTCAGTTTGACAAACACACTCACAGCCGAACA
CAGGTCAAGAAAAAGGTGGATGGGATAGGCAGACTCTTCAATCTACCAGAAAAAGATAAA
TATGTCGTGGCTCAGGGTATTGGTGGAAGTCCGATCACAGTTTGGAATGTGACTAGAAGC
AGGTGTCGTGGAGAAGCTGTGATTATCGAGCGAGGACTTCTGGACAAGAACGACATTGTA
ATCGTAAAGGACATGCTTGTTGTTATTTTGTCCGATCGTGGCATTGCTACAATGAGAGGT
CGTTCTGAAAATATCTTCGAAACTATTTATGTGTACAACTTGTTGTTACGAAAATACGAG
CGAAAACTACATCCCGTACAAATAAACATGTGCCCTCCTGACCAATATCATGTGATTGGA
AACGATAAATTAATTGGGACATCTAGTGACCATCTTCATCTTGTGGTGTGGAGTATTATT
ACAGGAAAGATTTTATACACCATACTGCCCGATTTTTCATGCTATCAGCAAGAAGAAAAG
ATACTTCATGACAAAAAGAGGAGGCGAAGACCAAAACTTCGCAATTACTCCATGGTGCCG
ATTCAACCAAAAAATACCGATGCGAAACGCACCACGTGGAAAAAATATAGAGTAACTAAA
GAAGAGCAACAACAGGCAATATTCGAAATGGTTGTCAGTGGCGACGAGTCAACTTTACTT
TGCTCATATTACTCTCGTCACATTGTGGTATTCAACTTGAAAAAACGATTGCATAAGCAT
ACACTGACGGACAAGCATTCGATCTTGAATTTACATAAGGCCATCTTGACCACAGATGGA
AAGCACTTATTAATGACCAACTATGACAGTGCTTCACATTATACTTACATCACTCTGTGG
GATTTGGAACTTGGCAACGTTTCAAGACGTCGTCGCAACGAACCGAAAGTATGCGCCTTG
GCTATGACAGATGACGCATCGAGAGTGGCGTTTGCAACAGAAGATAATTACCTCAAGATC
TGGGATCCCTTTCGTCGAAGCAGTCATCGTAGTATACCAGGATATTCTGGACTTGAAATG
GCAAACCCTCCAAACGATTGTTGCCAATCTACAACGCTGTACCTGACGATGGGCGGAAAG
CGAGCAATTTTGTACGCCAATTCTTTGTCAGTCTGGGATTTAGAGGCTGAAAATGTGTTG
ATGGTTTTCACACCAGACGTAAAGTTCCAATGTTGTACCGTAGCTCTGGGCGGCCAAGTC
ATCGTGGTTGGGATGCGAGATTCATCCAATATCATTACAATGCGTGTGAAACCTTCTGGG
AGCAACCACGTCGCCGACAGAGATATATTCGGGGAACGTAACGAATCGAGTGACGACGAC
ACGAGCGATGATGAAATCTCTTAGATGGTTAAAAGAAGGTACACTTGAGTGTTTCGTTAT
TCTTTCACGATTTTTTCACCTCGTTGTTTTCATTTTTTTTTTGTGACCGCACGAGTTCTA
TTTTTACTGTGCATGTTTATAATTTTCGTTCTATATTTTCATTTTTTCGTGGAATGTTTC
ATTTAATCCTTTATTTTGTAACGTATAGATGCACTATATTATTTCTGCTTGATCTGTATT
TTATTTCTGTTTATGTTTAAACCAAGCGATAG
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[590-667] 1.02E-10 - T[719-823] 1.02E-10 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1207-1365] 3.1E-14 - T[1367-1711] 7.7E-7 - T[1725-1965] 1.8E-11 |
| SMART |
WD40_repeat (IPR001680) - T[1219-1258] 5.3E-4 - T[1261-1300] 13.0 - T[1303-1344] 210.0 - T[1394-1431] 160.0 - T[1732-1772] 110.0 - T[1824-1862] 11.0 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[1222-1425] 1.02E-26 - T[1673-1694] 1.02E-26 - T[1757-1879] 1.02E-26 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[1226-1267] 12.915 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1226-1309] 13.316 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[1245-1259] . |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[1373-1578] 1.37E-8 - T[1639-1688] 1.37E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|