Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S226.g15893.01.t

Possible name(s)

TNNT1; TNNT2; TNNT3

Gene model

Harore.CG.MTP2014.S226.g15893

Location

S226 [6,012 / 9,046]

Sequences

Amino acid sequence

Length: 291

>Harore.CG.MTP2014.S226.g15893.01.p
MSASESEYSSEEEEVQEVEEVQEVEEVEEVEDVSAPAPPNVQDTNAVSEDSTEKVAPKFT
MPNITPPKIPDGEVIDLEDIHRKRMDKDLLELQSLISSHFETRKKDEEEIEQLRIRIEER
KACREEQMRVRQEKEKERMAREREERKRKEEEEEQKRIEEEAKKKAAIANMSLHYGGYLA
RADKNKPNKRQTDREKKKKILSDRRKPLNVDHLSAEKLQEKASELWKWLYSLEEEKYDFE
TRIDRQKYDINQLRQRVNEYMGKFSKTKRQTPGKVNTGARGGVSSKTGVFS

Nucleotide sequence

Length: 1,174

>Harore.CG.MTP2014.S226.g15893.01.t
ACTAACTACAGAACAAATAGTTCAATACTGTACCCTTATATTTACTATAAAAATACACTA
TGTCTGCCAGCGAATCCGAATACTCCAGTGAAGAGGAGGAGGTGCAGGAAGTCGAGGAAG
TTCAAGAAGTTGAAGAGGTTGAGGAAGTCGAAGATGTATCTGCTCCTGCCCCACCTAATG
TACAAGACACGAATGCCGTAAGTGAAGATAGCACTGAGAAAGTTGCACCAAAATTTACTA
TGCCCAACATTACTCCACCTAAAATTCCTGATGGTGAAGTCATCGATCTAGAAGATATCC
ATCGTAAAAGAATGGACAAGGATCTTCTTGAATTGCAAAGTTTAATCAGTAGTCATTTTG
AAACTCGTAAAAAGGACGAGGAGGAAATTGAACAGTTGCGCATTCGTATTGAAGAACGAA
AGGCATGTCGTGAAGAGCAAATGCGCGTAAGACAAGAAAAGGAAAAAGAGCGAATGGCAC
GGGAAAGGGAAGAACGAAAAAGAAAGGAAGAAGAAGAGGAGCAAAAGAGAATCGAAGAAG
AAGCCAAGAAGAAAGCAGCCATTGCAAATATGTCACTGCATTATGGAGGTTATCTTGCTC
GGGCCGATAAAAATAAACCAAACAAGAGACAGACTGATAGAGAAAAGAAGAAGAAGATTT
TGTCCGACCGAAGAAAACCCCTGAATGTTGATCATCTAAGCGCTGAAAAGCTTCAAGAAA
AGGCAAGCGAGCTGTGGAAATGGCTTTACAGCCTAGAAGAAGAAAAATACGATTTCGAAA
CTAGGATTGACCGACAAAAATATGACATCAACCAACTTCGACAAAGAGTTAACGAATACA
TGGGAAAATTCTCGAAAACCAAAAGACAAACACCCGGCAAGGTCAACACCGGAGCACGAG
GTGGCGTTTCATCGAAAACAGGAGTTTTTAGTTAAAATTTGACCTGTATACGGAATCTAA
AATATTCAAGGCATAAGAGGCATACTTTGATAATGAGAATTGTATAAAATTTTAAAAACG
AATTCGTTTTTGTTTCGCATTGTACCGTGTGCTTAATCGTATAGTGAAATAAACAGTTTG
AATCTACTAATTTCACTACTCTAACAGAGGTAGCACGGCAATAATAATATTCACTGGTAT
ATTTATGTATGTTACATCATTTGGGGCTTTGCAC

InterProScan

PANTHER	TNNT (IPR027707) - T[9-268] 5.0E-85
Pfam	Troponin (IPR001978) - T[83-219] 7.6E-25 - T[214-278] 2.6E-10
Gene3D	Troponin_sf (IPR038077) - T[171-277] 1.1E-34

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TNNT3_HUMAN	53.425 %	203	1.56E-64
TNNT2_HUMAN	54.148 %	194	1.07E-60
TNNT1_HUMAN	48.523 %	172	1.43E-52