Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S224.g13229.01.t

Possible name(s)

CNOT7; CNOT8

Gene model

Harore.CG.MTP2014.S224.g13229

Location

S224 [138,343 / 143,191]

Sequences

Amino acid sequence

Length: 298

>Harore.CG.MTP2014.S224.g13229.01.p
MPGQNAEDPIVEVWASNVDEEFKKIRKLVQRYPYVAMDTEFPGVVARPIGEFRSNSDYQY
QLLKCNVDLLKIIQLGLTFMNEKGETPSNISTWQFNFTFSLNEDMYAQESIDLLHESGIQ
FKQHEDEGIEPLYFAELLMTSGIVLMDNVSWVSFHSGYDFGYLLKILTNSSLPADENEFF
ELLKLFFPNIYDVKYLMKSCKNLKGGLQEVAQQLEIERIGPQHQAGSDSLLTGFTFFKMR
EDLVMFRTAIHTVQRNSTKTENWHKMKQIIQIWFYPLTHVVKFLHFNRMTKKNQNCCE

Nucleotide sequence

Length: 1,680

>Harore.CG.MTP2014.S224.g13229.01.t
AGATACCTGAAGCCAATCATATCTTTACTATCAGGTTGAACCTGTGGTAAATATAGGTGT
AAACAAATAAAAATGCCAGGACAGAATGCAGAGGATCCTATTGTGGAAGTATGGGCTTCC
AATGTTGATGAAGAATTCAAAAAGATAAGGAAGTTGGTTCAACGCTATCCCTATGTAGCA
ATGGACACAGAGTTTCCTGGCGTTGTTGCTCGTCCAATTGGAGAATTTCGCAGCAATTCA
GATTATCAGTACCAACTTCTAAAATGCAATGTTGACCTTTTGAAGATCATTCAGCTTGGC
TTAACTTTTATGAATGAGAAGGGGGAAACCCCGTCAAACATATCCACGTGGCAGTTCAAT
TTCACTTTCAGTCTCAATGAGGACATGTATGCTCAAGAGTCAATCGATCTTCTACATGAG
AGTGGGATTCAATTCAAGCAGCATGAGGATGAAGGAATTGAGCCATTGTATTTTGCCGAA
CTCCTGATGACTTCTGGAATAGTTCTAATGGACAATGTGAGCTGGGTTTCCTTCCACAGT
GGCTATGACTTTGGGTACCTCCTCAAAATTCTGACAAATAGTAGTCTTCCAGCAGATGAG
AACGAATTTTTTGAGCTGCTCAAGTTGTTTTTTCCCAATATTTATGATGTAAAGTACCTA
ATGAAGAGCTGCAAGAATCTGAAGGGTGGTCTCCAGGAAGTAGCACAACAATTGGAGATC
GAAAGAATAGGGCCCCAGCACCAAGCTGGAAGTGACAGCCTACTCACTGGATTCACCTTT
TTCAAAATGAGAGAGGATCTAGTTATGTTCAGAACGGCAATCCATACAGTGCAGAGGAAT
TCAACAAAAACTGAAAACTGGCACAAAATGAAGCAAATTATTCAAATATGGTTTTACCCG
TTGACACATGTCGTAAAATTCCTACATTTTAACCGAATGACTAAGAAAAACCAGAACTGC
TGTGAATAGAAGCGCCATATTTATTTGTGAGAATTGCATCCTGTATGTAATTAAAGAAGA
GGACACTCTGATATTTGACTGGCTGGTCTGTGGACTGTGATATATGGATAAAATGGAAAT
GGTTTTCCTCCTAGAGAAAGGGAATGCGTGATGTTGTCCATGGATCGGAGCTGGGAATTG
TAAATCCAATTGGTGAAGTAAGGATTCGGTAGAGTTGTTGGGGCAACGATAATATTCCTG
ACACTGTCATATCTTGGATGTATGATCTTGTTCGTAGAAAATTGAAAAACCTAGATTACT
ACTGCTGGATTTTATCAAAATTTGTAGTTTGTTGAAGGGTATTCTGACCAGAGGTTACTT
GAAAGGTTACTAGGAATTTCCCCCTTTAACTAGGACCAGGTGCATAGAACATTATTTTGT
ATAACTACTATTATTGCTGTTTCATGCATATGCTTGTACAGTATGTTCTAGGATGAATTT
GTGTAAGTAGAATTTATCTGAGAAATGTTGATAGCCGTTCACTATAGTATGCCTTTCTTG
CACAGAAAATGCCTAGGGGGAAATTTTCTATAATTTAACATTCCTACGAATATGTGGCGT
AAATTTGTACGGATTTTACTTGCTGCTTTACAAATTTATCAGAATGAAAGATCATTGCGT
AAGAGTATGTATGTAATCATAAACTATGGAAATGGAAGAAACGCTTTTGTCATGGATTTA

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[2-263] 5.5E-116
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[9-246] 5.78E-94
Pfam	RNase_CAF1 (IPR006941) - T[13-130] 5.6E-12 - T[152-236] 2.4E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	79.741 %	395	1.48E-139
CNOT8_HUMAN	72.84 %	380	1.12E-133