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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R20....' > 
  2. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S20.g15964.01.t

Possible name(s)

ZDHHC12; ZDHHC14; ZDHHC17

Gene model

Harore.CG.MTP2014.S20.g15964

Location

S20 [194,448 / 199,370]

Sequences

Amino acid sequence

Length: 336

>Harore.CG.MTP2014.S20.g15964.01.p
MAKKISDLFFGRKMSKNFVPRTTVDRNSSVETSAGAELLGTQRVMPIPERPSEEGSMDSD
ACPSLTASENELVIDRAFEITQAPPPNRSNTFTPRRPVADNSLNAVTVNGMAHNPLARSQ
NISMLPNDSIRNLYRVIPNGGNDSMLPIANHYTSIHGFCPSATDPNSKQCEPQTAFLTYV
KDEASLVETQNLADVLITSGINIKIDFYDKKLMGMGINQWINDNIQESDHIIVCINKSYK
SAVSETYGGSSENVKHAITVYNQLQTILMNANSMNYRILPVIVGNATRDDVPLVFQNTFV
YRWPQHYEEILRRVFKIPERKPPALGRPPKMVLEKY

Nucleotide sequence

Length: 3,456

>Harore.CG.MTP2014.S20.g15964.01.t
AGCTAAATGAACTAGGCCATTTCTACATCGATTTGTAAATATTATTTATATATTAAATGC
TCGAAGAGTATGCCAAAGTCAAGGACATCTAAAGACCTGGCTTCTAAAATATTTTCGCGG
GCGATCCACTTCGTCATCACTTTGGGAGTGTTTGCTGTATTGGTATCCACGGACACTGTT
CTGCGCATCCAAATCAAGAACGGTGATGTTATTCTCCCAAGTACGTTTATCATTGCTACG
TTCGTGTCCCTCGTACTGTATTGCATAGTGTCTTTCATGGACCCAGGGTATGTCAAAAAG
TCCGACCCAGATGTCAAAGAGATTTCTTTAGTACTCGATGACTGTGATAATGAAGTCGAG
CTTTTTGAAGTAAAGACGTCGCTAAGAGGTGAAAGAAATGACAACACTTCTTCTTCCGAT
GACGAGAGACAAAGCATGTTAACGAAGGGGACAGCGGAACATGAAAGTTCTCAAGCCGTT
AGATTTAACTTGGAGCCGAATCAGAGATGTGGTTTTTGTGGTCTCGAGCGACCGCTGAGA
GCGAGACACTGTCGGGAATGCAAGCACTGCGTTCGAAAGTTCGACCATCACTGTCCGTGG
GTCGCCAATTGTGTTGGAGAAAAAAATCACAAGTGGTTCTGGATATTTCTCACATTTGAA
ACTTTGCTCATTTCATGGTGTATATATATTTCAACGACCGGATACAGAAGCTCAGGGTCT
TCAAAAGACTGGCTCAATCACAATGTCCTACTGCTTCTTGTAGATATCATACTTGTGATA
TTTTTATTTATTGCTGGATCGATGTGCACGATTCATACATACATGGTCTTGTCGAATCAT
ACGACTTGGGAGAGCATGAGCAGGCACAGAATCACATACTTGAATCAAATCGCAATAGAC
AACCCATTCAACATGGGATCTTGCAAAAATATCTACGTTTTTTTCTGTTATTGTAAGCCT
TTCGACTGGCATGCCGTATATGACCTCAAGGTTTCCAAGACCCAGTTTTCCGGCACCCAT
AATAAAAACTGCAGTGCAAATGACGAAGAAGAAGAAGTTAGGAACGATACTCATTTATGA
GGTAATGAAGTTCGTAAGTAATTTTACCTCGACAGTTGTTATCATACTTCAAAATTAATT
ACACAATAAATATATAATGATCCAAGATTATTTGATGACATTGACATTACGTGACAGTTC
CTAGAACATACTACAGTGGCTAATAGGCTTTGAACTTTAAAAATAGCACCATCCCGAGTT
ACTGTAGTTAAACTTATTACATATGAACTGATTATATAGACATTGGATCCTACAGTATAT
TCAGGCATATAGATACTGTATTTGCTTCTTTTACCAAAAAAAGTATCAAAAAATTGGCAA
TGTATGATAGGGAGACCATCCTTATATTGTGAACTATAATATTACCCTGAGCTGCCTAGC
TAGGGGATCTGGGTTGATTAGTAAACCACTGAGCATAATGGATGTGGTAAAATTTACCAT
ATATGTTAAGATTAGGAATTAGGGATAGGAAACAATGAATACATCACTATAACAGTCCAT
TTGAAAAATGGGATTGGCTTAAACTCAATGTAGTACAAGATTATTGAAACATTCAGAGAT
TAATGAAACTAAAAATGTAGTCTAGAATTGCATAGAGGCTGGGGCATTGAGGCAAACTGA
ACTGCCTTGGTCTGGCTAATAGTCATTGTCAAAAATGCCCTGGTCGTACATTGCTGGCAG
CAAACTTGAACTTAGTGTATAACAAATGAAGTCCCATTCAACTTTTTAGGTTGAGAGTAA
GGCTGCTATTTCTAACTGTATGTAAAATAGCACATGGAGACTCTAGACCAGCATTATAAC
TATAAATTGAAGATTCACTGTAATACTAAGAAAATTCGGTAATTTTCATTATATCATTGT
TCTTATCAATCTTATTACTTTCTGGTAATGCAAATAGCTTTTCAATATTAGTGTGGTTGA
TCGCTGATAATGTTGATAGGTAAGGGTAGTCTTACTCCATAACATGGAGAATGGATTACA
AAATAATAGCTATATTTCAGTAGATAAAACCTCGTATTAAAACGTAAACATTCGCATTAA
CACAAATATATACAACACAGTTAATCAGAACCAGACGCTCATTCGGAGCGGATATCAGTA
CTTTTCGAGCACCATCTTAGGGGGCCTCCCGAGAGCAGGAGGCTTTCGTTCAGGGATTTT
AAACACCCGCCGTAAAATTTCCTCATAGTGCTGGGGCCATCTGTAGACAAAGGTGTTTTG
AAACACGAGGGGAACGTCGTCTCGCGTCGCATTGCCGACGATGACAGGCAAGATCCGATA
ATTCATTGAGTTGGCGTTCATGAGAATTGTCTGTAGTTGGTTGTAAACGGTGATGGCGTG
CTTGACGTTCTCTGAGCTGCCGCCGTAGGTCTCACTGACTGCGCTTTTGTAACTTTTGTT
TATGCAGACGATGATGTGGTCGGACTCTTGTATGTTATCGTTGATCCACTGGTTGATACC
CATTCCCATCAATTTCTTGTCATAAAAATCGATTTTTATGTTGATGCCGCTTGTAATGAG
TACATCAGCTAGATTTTGGGTTTCCACTAGCGATGCTTCATCTTTGACATAGGTAAGGAA
AGCGGTTTGTGGTTCGCATTGCTTCGAGTTGGGATCTGTAGCTGAAGGGCAGAAACCATG
TATGGAAGTGTAATGGTTAGCAATTGGAAGCATGCTGTCATTACCACCGTTTGGTATAAC
ACGGTAAAGATTTCTGATGGAATCATTAGGCAGCATGCTAATATTTTGTGATCTTGCAAG
AGGGTTGTGAGCCATGCCATTCACAGTTACAGCATTCAAACTGTTGTCAGCTACTGGTCG
TCGAGGTGTGAAAGTGTTACTTCTGTTGGGAGGCGGTGCCTGTGTAATTTCGAAAGCCCG
ATCAATGACAAGTTCGTTTTCGCTAGCTGTCAGAGACGGACATGCGTCTGAATCCATACT
TCCCTCCTCGGATGGTCTTTCTGGGATCGGCATCACTCTTTGGGTCCCAAGTAACTCAGC
TCCCGCTGACGTTTCTACCGAGGAATTACGATCTACTGTCGTACGTGGAACAAAGTTCTT
GGACATCTTTCGTCCAAAAAATAAATCACTTATCTTCTTTGCCATTATTTACTGATGTTA
ACGGTTTTAGTTTCAGTAACCAAGTTTCAATTCTTCTTTTGAGTCGTACGCAAATTTTGT
GTTTGTAAGGGACTTTCCCTGTATTGTCTGTGGTTCCGTGTAAAACATCACTGACGTATT
TAACTGAACAGAAAATTACGATCTACAGTAATATCACCTATCGCGGGTATTGCGTTCCAG
AGCCTCCCGCGATAGGTGAAAATCCGCAAAATAGAAACCACATATTTTATTCAAACGTAT
TTTAAACCATTATAAATCCTTTACATACTCTTATTT

InterProScan

ProSiteProfiles
SEFIR_dom (IPR013568) - T[172-312] 15.238
Gene3D
Toll_tir_struct_dom_sf (IPR035897) - T[173-317] 1.2E-6
SUPERFAMILY
Toll_tir_struct_dom_sf (IPR035897) - T[174-313] 1.31E-7
Pfam
SEFIR_dom (IPR013568) - T[174-313] 2.5E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CIKS_HUMAN 30.519 % 85.5 2.8E-18