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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S20.g11853.01.t

Possible name(s)

TAB2; TMCO1

Gene model

Harore.CG.MTP2014.S20.g11853

Location

S20 [389,387 / 392,185]

Sequences

Amino acid sequence

Length: 177

>Harore.CG.MTP2014.S20.g11853.01.p
MPMLGDSLLIVFISVFTALLAEGLTWLMVYRTEKFKKLKFEVEKQSKKLEKRKEAFGETT
DKGQKRRLNREEEKLKNNNRDLSAVRVKSMFAIGFCFTALLGTLNSVFEGRIVAKLPFVP
IGLLQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQMPMLLCNKMYIFYPGEGKTSFQ

Nucleotide sequence

Length: 756

>Harore.CG.MTP2014.S20.g11853.01.t
ATGCCAATGCTCGGTGACAGCCTGCTTATAGTGTTTATTTCGGTGTTCACAGCTCTTCTC
GCGGAAGGTTTAACATGGCTGATGGTGTACAGAACAGAGAAATTCAAAAAGCTAAAATTT
GAGGTTGAAAAACAATCAAAAAAATTGGAAAAAAGAAAGGAAGCATTTGGTGAAACCACA
GACAAAGGTCAGAAGAGACGGCTTAATAGGGAAGAGGAAAAATTAAAGAACAATAACAGA
GACTTGTCTGCCGTCCGGGTCAAGTCTATGTTTGCCATCGGGTTTTGCTTTACTGCATTG
CTGGGGACTTTAAATTCTGTCTTCGAGGGCAGAATCGTAGCCAAACTTCCATTCGTCCCC
ATCGGCCTCCTGCAAGGATTATCGCACAGGAACTTGCTTGGGGAAGACTACACTGATTGT
TCATTCATATTTTTGTATATTTTGTGTACAATGTCCATCAGACAGATGCCAATGCTTTTA
TGCAATAAAATGTACATATTTTATCCTGGAGAAGGAAAGACTTCATTTCAATAACATCCA
GAAGCTTCTTGGTTTCGCTCCGTCTCGAGCAGCATCCAAACAGACGGGAGGAGGGTTTTT
TCAACCGCCGCAGCAAGGAAGATGATTTGTTTTTTTGATTCAACTCTTTTATTGCTCTTC
ATCACATCCTATAGTACCCATTTGACATTGCAGCACCAATTAGGGTTAAGTAACATTCAC
CTCAGCTATGGAACGCTTTCTCTATTTCTCAATTAG

InterProScan

PIRSF
TMCO1 (IPR008559) - T[1-167] 1.5E-66
PANTHER
TMCO1 (IPR008559) - T[3-157] 1.2E-56
SMART
EMC3/TMCO1 (IPR002809) - T[6-165] 4.8E-42
Pfam
EMC3/TMCO1 (IPR002809) - T[7-156] 6.7E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMCO1_HUMAN 73.856 % 219 7.29E-74