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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S2094.g14795.01.t

Possible name(s)

SLCO1B1; SLCO4C1; SLCO5A1

Gene model

Harore.CG.MTP2014.S2094.g14795

Location

S2094 [0 / 2,117]

Sequences

Amino acid sequence

Length: 236

>Harore.CG.MTP2014.S2094.g14795.01.p
LPQAFISLITNPTYVCITLTATLEFSLITAFLTFVPKYIQTQFGIDPSLASILTGVVLVP
SAGGGIFIGGYIIKRFKLNMTGCAKVAVMTNIFSLIMFVSCFFVYCPSSDVMGIADDSCT
NCSCTSSLYNPICLTNITFYNPCTAGCSDVLRHDNGTQIEPLTYTGCDCNGLNITATQGI
CETNCTQTFIPFMVCLFLITMATACAQTPGLMVTLRCVKNDERPFAMGLQFVFYRT

Nucleotide sequence

Length: 712

>Harore.CG.MTP2014.S2094.g14795.01.t
AATTACCACAAGCATTCATATCACTAATAACCAATCCGACATACGTCTGCATCACTTTGA
CTGCGACATTAGAATTTTCCCTCATCACTGCATTCCTCACGTTCGTCCCGAAATATATCC
AGACGCAATTTGGCATTGATCCATCTCTAGCAAGTATTTTAACAGGAGTTGTACTGGTTC
CGAGCGCAGGTGGAGGAATTTTTATCGGTGGTTACATCATCAAACGCTTCAAACTTAACA
TGACCGGATGTGCTAAAGTTGCAGTGATGACCAACATCTTCTCTCTTATTATGTTTGTTT
CGTGTTTCTTTGTCTACTGTCCATCATCAGATGTTATGGGGATTGCCGATGACTCGTGCA
CGAATTGCAGCTGTACATCATCTTTATACAACCCGATCTGCCTCACGAATATCACTTTTT
ATAATCCATGTACAGCTGGATGTTCTGATGTATTGAGGCATGATAATGGAACACAGATCG
AACCATTGACATACACAGGCTGCGATTGCAACGGACTCAACATAACAGCAACACAGGGGA
TTTGTGAAACAAATTGCACGCAGACATTTATTCCATTCATGGTTTGCTTGTTCCTTATCA
CCATGGCTACAGCATGTGCTCAGACACCAGGACTGATGGTTACATTACGATGCGTCAAAA
ATGATGAGAGACCGTTTGCGATGGGATTGCAGTTTGTATTTTACAGAACTCT

InterProScan

PANTHER
OATP (IPR004156) - T[1-236] 1.5E-68
Pfam
OATP (IPR004156) - T[1-235] 8.2E-58
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[2-108] 4.84E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO4C1_HUMAN 29.231 % 123 3.84E-32
SO5A1_HUMAN 38.929 % 176 9.06E-51
SO1B1_HUMAN 31.274 % 124 1.47E-32