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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...' > 
  4. Transcript 'Haaura.CG.MTP2014.S6...' > 
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S205.g01956.02.t

Possible name(s)

RIC1

Gene model

Harore.CG.MTP2014.S205.g01956

Location

S205 [143,489 / 154,129]

Sequences

Amino acid sequence

Length: 1,502

>Harore.CG.MTP2014.S205.g01956.02.p
MYFPLGWPKILCQSKDEKSYMKFISCNRYRMLFVVLTEETVSIWHCRPLVEILHYKRSQS
SIEKAGKNEIAEWRHDSSMLALVTNTGFLLIFRLEQDIKSETGINLYEYRQNKSAHSENS
DGIPALRLCLKASIQYSSTITSLSCINDDILISTSNGELELIPWLEIPSARKLVNIQDIP
FSVDFQSAGSALRSKHTTFINQLTYSPCLDGFTAVFNDGRAALVVVSNTSIEKEKNVSWK
CHGIWAPGLTKAVCNAVNNRYRLMAFGTSRGSCEVFSLDDVSGSLQFSHQMALTPKYYPD
VYRNTGSVLDMKWSPDGCALAMSWSNGGFSLWSVYGACLLCTLNTDHAFTAEGCRKEQSL
FYSMCWGAEGYQLWILQKHHTELHKSSSTKDFSLVYCDKCDMVTRNHSVCKSGYDLLGST
SSLSDDGFIEPVELSEKTESDNEQSNASSSHSDVFCPVSNELVQMQFAKTALTMNPCRGN
HSHIILQAEDRIISSFGDKNNAMPSSIKPTNLDFNLLSSSQQSTLKTPDRTFENVVGNKQ
WNVMQMPLNYLNGNWPIRFTSIDKAGQLLAIAGNFGLAHYSLVTKKWKLFGNVMQEKDMV
VTGGLTWWRGLIIVACFNLVSTQDELRIYPNNTNLDNVFSYTKKVHSQVLLINVYMDTLI
TFDAACYIRLYRIEPDDKIQYQSARLSVIREISMARFVSFPSLVISVTMASLHMDSGGRK
HSSLEQETEVLIINVAGRLLLLQPSLGEYGNQGENASVNLSFSKDMNFHPPIVLASSVEN
VWTTELKNSQKVHLTDALWLGCGSAGLRVWLPLFPPSRRAQTGGIGEHDIQVLLSKRITV
TLEVDTCYPLTVLFENAVVLGAKTESFHYQKTLANGNSSFLSVERSCEIYLHQILRQLLR
RNLGYHALQVAASCKSHSYFPHVLELMLHKVLEEEATASEPIPDPFLPTIVKFIAEFPEY
LETIVHCARKTEIALWQYLFSYVGNPKELFEECLEAGQLQTAASYLIILQNLEKLAVARQ
DATRLLNKALNAFMWLLAADIIRFLRAIGDGDATTSPRHPVLLNRNIYPAPASHLSLEES
TKFSENIAPRDRSATSSVSSALQSRNIGGRSRRNYFERPTVLNTTQNAEYSASFHPYVSQ
YPVKKSYPHHRILQASLSYPPAHEVSQANEKSNNENAKMLILPEESLNAECAEHFFIDVI
LSRQARKLLSQRKMKELATFAAHMDFALVPWLQKEKNRAARVSDPVKCLCMLHSNFNIPY
PEAKKETSDKHFVQRNSNSTHHDESCDSVAEEISIRYKADKGREFSRTKEQLMYLFRILL
ESSCLELAMLVCIVLRKLSLLSEFITYVCSGEGIQLTLLQRTRECVVQIKKWAVTDGKCY
DPVLSSMKNHFLKFNEIVNSHEVDFAEKQAVFAQQKAAMDNSFKSVSSDVEESSLARLKI
SDYAEDDCPAFTEESENNISDDLSHKSSVLIEPSNNNSSANETNESFNSERVEEGSDACR
IV

Nucleotide sequence

Length: 5,185

>Harore.CG.MTP2014.S205.g01956.02.t
AGAATATGTGGTAATCATTGCATTAAAGAAAAGACGTAATGTATTTTCCTCTTGGTTGGC
CAAAAATACTGTGTCAAAGCAAGGATGAAAAATCTTATATGAAGTTCATATCTTGCAACC
GGTATCGCATGCTCTTTGTTGTTTTGACGGAAGAAACTGTGAGCATTTGGCATTGTCGTC
CTCTAGTAGAAATACTGCATTATAAAAGAAGCCAATCCTCAATAGAAAAAGCTGGTAAAA
ATGAAATTGCGGAATGGAGGCATGATAGCAGTATGCTGGCTTTGGTTACAAATACTGGAT
TCTTGCTCATATTCCGACTAGAACAGGACATAAAATCTGAGACTGGAATAAACCTGTATG
AGTATAGACAAAATAAAAGTGCTCACAGTGAAAATTCTGATGGAATACCTGCTCTGAGAT
TATGCTTGAAAGCCAGTATTCAATACAGCTCCACCATAACCAGTTTATCATGTATCAATG
ATGATATCTTGATATCAACAAGCAATGGAGAATTGGAATTAATACCCTGGCTTGAAATTC
CGTCTGCAAGAAAATTGGTTAATATTCAAGACATACCTTTTTCAGTTGATTTCCAGAGCG
CAGGCTCAGCACTTCGAAGTAAGCACACTACCTTCATCAACCAGCTAACTTATAGCCCCT
GTTTGGATGGCTTCACTGCTGTTTTTAATGATGGCCGTGCAGCCCTTGTTGTTGTTTCAA
ATACCTCGATTGAAAAAGAAAAAAATGTGTCCTGGAAATGTCATGGTATTTGGGCACCTG
GTTTGACAAAAGCTGTTTGCAATGCTGTGAATAATCGTTATCGATTGATGGCGTTTGGAA
CATCAAGGGGTAGCTGCGAGGTGTTTAGCTTGGATGATGTTTCAGGATCTTTACAATTTT
CACACCAGATGGCATTGACTCCAAAGTATTATCCTGATGTCTACAGAAATACAGGTTCTG
TCTTGGACATGAAATGGTCTCCTGATGGCTGTGCACTCGCAATGTCTTGGTCAAATGGTG
GTTTTTCATTATGGAGCGTGTATGGAGCATGTCTTCTGTGCACTTTGAACACAGATCATG
CGTTTACAGCAGAGGGTTGTCGTAAAGAACAATCATTGTTTTATTCTATGTGTTGGGGTG
CAGAAGGTTACCAGTTATGGATTCTCCAGAAACATCACACAGAATTGCATAAAAGCTCTT
CGACAAAAGACTTTTCGTTAGTGTATTGTGATAAATGTGATATGGTGACAAGAAATCACT
CTGTCTGTAAATCTGGATACGACTTGCTTGGTAGCACATCCTCCCTAAGTGACGATGGCT
TTATTGAACCAGTGGAATTGTCAGAGAAAACTGAAAGTGACAATGAACAAAGCAATGCAT
CCTCTTCACACAGCGATGTTTTCTGTCCTGTCTCAAATGAACTAGTACAGATGCAATTTG
CCAAAACTGCTTTGACGATGAATCCATGTAGGGGAAATCATTCTCACATCATACTTCAGG
CTGAGGACAGAATAATCTCAAGTTTTGGTGACAAAAATAATGCAATGCCTAGTTCAATAA
AACCAACAAATTTGGATTTCAATCTGTTGTCGTCATCTCAGCAATCAACCTTAAAAACAC
CAGACAGAACTTTTGAAAACGTAGTTGGAAATAAGCAGTGGAATGTGATGCAAATGCCTC
TGAACTATCTAAATGGGAATTGGCCTATACGATTTACATCAATTGACAAAGCTGGCCAGT
TGTTAGCTATAGCGGGTAATTTTGGTCTCGCGCATTACTCTCTAGTGACGAAGAAATGGA
AGCTTTTTGGAAATGTAATGCAAGAAAAGGATATGGTTGTTACAGGTGGCCTTACTTGGT
GGAGAGGTTTGATCATAGTGGCATGCTTCAACTTGGTTTCTACTCAGGATGAACTAAGGA
TATATCCGAACAACACAAATTTGGACAATGTTTTTTCTTATACAAAGAAAGTTCATTCCC
AGGTTCTGTTGATAAATGTGTACATGGACACACTTATCACTTTTGATGCAGCATGCTATA
TCCGACTATATAGAATTGAACCGGATGATAAAATACAGTATCAAAGTGCCAGACTATCAG
TCATACGTGAGATATCTATGGCTCGCTTTGTGTCTTTCCCATCTCTTGTTATATCTGTTA
CAATGGCTTCGCTGCATATGGACAGTGGGGGTAGAAAACATTCTTCTCTTGAGCAGGAAA
CTGAAGTGTTGATCATTAATGTTGCAGGAAGACTACTTTTACTTCAGCCCAGCCTAGGGG
AATATGGTAATCAAGGTGAAAATGCTTCCGTCAATTTATCATTTTCAAAGGATATGAATT
TTCATCCACCTATTGTCTTGGCATCTTCTGTTGAAAATGTTTGGACAACTGAGTTAAAAA
ACAGCCAAAAGGTTCACTTGACTGATGCTCTTTGGCTGGGTTGTGGCTCTGCTGGATTGC
GTGTATGGCTACCTCTCTTTCCGCCGTCTCGGCGTGCACAGACTGGTGGGATAGGAGAAC
ATGATATACAAGTGTTACTCTCCAAACGTATTACTGTTACTCTAGAAGTTGATACATGTT
ACCCCTTGACAGTATTGTTTGAAAACGCTGTTGTTCTTGGAGCTAAAACAGAATCATTCC
ATTACCAAAAAACTCTTGCCAATGGTAACAGCTCATTTTTAAGTGTTGAAAGATCTTGTG
AAATTTACCTGCATCAGATTTTGAGACAACTTTTGCGGCGTAATCTAGGATACCATGCAC
TTCAAGTTGCCGCTTCTTGCAAATCACATTCGTACTTTCCTCATGTTCTCGAACTCATGC
TGCATAAGGTTCTAGAGGAGGAAGCAACAGCATCTGAACCAATCCCTGATCCTTTTTTGC
CAACCATTGTTAAGTTCATTGCGGAATTTCCTGAGTACCTCGAAACTATAGTGCATTGTG
CAAGAAAAACAGAGATTGCTCTGTGGCAGTATTTATTCAGCTATGTTGGCAATCCAAAAG
AACTGTTCGAGGAATGTTTGGAGGCTGGACAACTTCAAACTGCTGCTTCTTACCTCATCA
TTTTACAAAATTTGGAAAAACTTGCTGTTGCCCGACAAGATGCAACTCGCCTTTTGAACA
AGGCCCTCAATGCATTCATGTGGTTACTGGCGGCTGATATTATACGATTTCTGAGAGCTA
TAGGTGATGGTGATGCTACTACCTCTCCACGTCATCCTGTTTTACTGAACAGAAATATCT
ATCCAGCCCCTGCATCCCATCTGTCATTAGAGGAATCCACAAAATTCAGTGAAAACATTG
CTCCAAGGGACAGAAGTGCAACATCTTCGGTGTCAAGCGCTTTACAGAGTAGAAATATTG
GAGGCAGATCACGCAGGAATTATTTTGAACGGCCTACTGTGCTCAATACAACTCAGAACG
CCGAATATTCTGCATCATTCCATCCTTACGTATCACAGTACCCTGTGAAAAAATCTTATC
CTCATCACAGAATATTGCAAGCATCACTAAGTTACCCACCAGCACATGAAGTTTCACAGG
CTAATGAAAAAAGCAACAACGAAAATGCCAAAATGTTGATACTTCCTGAAGAAAGCCTGA
ATGCAGAATGTGCAGAACATTTTTTTATTGATGTTATTTTATCCCGTCAGGCAAGAAAGC
TATTGAGTCAAAGAAAAATGAAAGAGTTGGCTACATTTGCTGCTCACATGGATTTTGCCT
TGGTGCCGTGGTTACAAAAAGAAAAGAATCGTGCTGCAAGGGTGTCCGATCCAGTCAAAT
GCCTTTGCATGCTGCACAGCAATTTTAATATTCCTTATCCAGAAGCGAAAAAGGAAACAA
GTGATAAGCATTTTGTGCAAAGGAATAGTAACAGTACTCACCATGATGAAAGTTGTGATT
CAGTTGCTGAAGAAATATCTATCCGCTATAAGGCCGATAAAGGCAGAGAGTTCAGTCGAA
CTAAGGAACAGCTAATGTACCTATTTCGGATATTGCTGGAATCTTCTTGCCTGGAATTGG
CTATGTTGGTTTGTATTGTTCTGAGAAAACTGAGCTTATTATCAGAATTCATCACATATG
TATGTAGTGGTGAAGGAATCCAGTTGACTCTACTACAACGTACAAGAGAATGTGTGGTGC
AGATAAAAAAATGGGCAGTTACAGATGGTAAGTGCTATGACCCTGTGTTATCAAGCATGA
AGAATCATTTTCTTAAATTCAATGAAATAGTAAATTCACACGAAGTTGACTTTGCTGAAA
AACAAGCAGTGTTTGCCCAGCAGAAGGCTGCCATGGATAATTCATTTAAAAGTGTTTCCA
GTGACGTCGAGGAAAGTAGCTTGGCAAGACTGAAAATATCGGACTATGCTGAAGATGACT
GCCCAGCTTTTACAGAAGAATCGGAGAACAATATAAGTGATGACTTGTCACACAAGTCTT
CAGTTTTAATTGAACCATCTAATAATAATTCATCTGCCAATGAAACAAATGAAAGTTTCA
ATAGTGAACGTGTAGAGGAGGGTAGTGACGCTTGTAGAATAGTATAGTTGTACAACTTGG
GAGTTCATATATTGTAGTAATTCTATTTTGTATTTAATAAAATATTCTATATCATAATTC
CTAGTTTTTGAATTCTTATTTCCTCCTGTTTATCCAAAAAAGCACTTTACCAATGGCTAG
TCAATGCTGTTCCATCAGTATCTAATGCAAGATTACGGTAAAAACTAGTATTGTGCTTAA
AGTTTCATTCTTCGAACTCTTAAACATCTGTAATTTTTACATTATGTCATACAACCTAAA
AGTACTTTATTTCCAACTGTTTGTATGTAGTATATATAAGCTTCCAGTCGAGACAGGATC
TTCAAGTAGTAGTTTTGAGACTGGAAATTCATAGCCATAATAATGACCATATTTAGTATC
CTAAAAATGTGGAGTTTATAAGTCAATTAACCTGATGAAAGTTTCTCTATTATATAGTTC
TCTCTAATATAAAAATTTTGCATTTTGTGAAAATTACGACTATTCAGATGTATTTCAGAA
AAAACAATCAGAGTAAGCAATATGACCTCACTCGTCGTCCAGTATTTGCTCCTATTGCTT
GCTTTGTGGCTTACTCATTACACTAATTCCCTCGATCAATTATTTCCTGAATTTGCTACA
TGCCAGGGTACGCAAGAACACAAAT

InterProScan

SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[30-94] 2.87E-13 - T[132-370] 2.87E-13
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[73-338] 2.2E-6
Pfam
Ribosome_control_1 (IPR009771) - T[794-1052] 8.4E-80

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIC1_HUMAN 46.774 % 563 2.0E-175