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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S200.g00002.01.t

Possible name(s)

CHRNA3

Location

S200 [25,372 / 26,814]

Sequences

Amino acid sequence

Length: 339

>Harore.CG.MTP2014.S200.g00002.01.p
MGRICLFDVTQLNDFVKRQETENVNEKNTKGDTYIHEDTRGKKSNVRVAKSCLCNVMFSC
FKEEEGEREKNNIDEISIIKNKSNSSACRFPHERRIYSSPPTTTFKRTKMSSRQRMRRRR
CSMESSAQSVFHNLVQIQGRDSLRRKLEYYSPCGEKMQMTGHSCCNQRPLYIRKEYVMEN
GTRPSARPLHYLANTSTEKCTHNPEVSFGKSTARSHMKIDGCSRSPSIKSHSFEQKSTPR
ETGSLAEHKLVTLCSKVGEVMEHMKDVVMDMKEKNVEIEMESEWKKIALMMDKLFLRLYT
AMLVISHVTILAIAVMTSSIVEPHSEHKSSVMMPDHHEK

Nucleotide sequence

Length: 1,020

>Harore.CG.MTP2014.S200.g00002.01.t
ATGGGACGGATCTGTCTTTTCGACGTCACTCAACTCAACGATTTTGTAAAGAGACAGGAA
ACGGAAAATGTTAATGAAAAGAATACAAAAGGTGATACATATATCCACGAGGATACTCGA
GGGAAAAAATCCAATGTAAGGGTGGCAAAGAGCTGCCTTTGTAATGTCATGTTCTCCTGC
TTCAAAGAAGAAGAAGGGGAGCGTGAAAAAAACAACATAGATGAAATAAGTATCATCAAG
AATAAGTCGAATTCATCGGCATGTCGATTTCCGCACGAAAGACGAATATATTCTAGCCCT
CCAACAACAACGTTCAAACGAACCAAGATGTCCTCTCGACAGCGGATGCGCCGACGACGG
TGCTCGATGGAATCCTCCGCACAATCCGTGTTTCACAACTTAGTGCAAATTCAAGGCAGA
GATTCTCTGAGAAGAAAGCTGGAGTATTATTCACCGTGCGGTGAAAAAATGCAGATGACA
GGGCACAGTTGCTGCAATCAACGACCTCTTTATATAAGAAAAGAATATGTTATGGAGAAC
GGTACAAGGCCGTCTGCCCGTCCCTTGCACTATCTAGCCAATACCTCTACTGAGAAGTGC
ACCCACAACCCTGAAGTCTCATTTGGGAAAAGTACTGCACGCAGCCACATGAAGATAGAC
GGGTGCTCCCGTTCTCCTTCCATAAAAAGTCATTCGTTTGAGCAGAAAAGTACGCCCCGA
GAGACAGGTTCATTAGCTGAACACAAGCTCGTTACGCTTTGTAGTAAAGTTGGTGAAGTT
ATGGAGCATATGAAAGATGTAGTGATGGATATGAAAGAGAAAAACGTGGAAATAGAAATG
GAATCGGAATGGAAAAAGATCGCTTTAATGATGGATAAACTCTTTTTACGCCTCTACACA
GCAATGCTAGTGATAAGTCACGTTACCATTCTCGCCATAGCCGTGATGACGTCATCGATT
GTCGAACCCCATTCCGAACACAAGAGCAGCGTGATGATGCCGGACCATCATGAAAAATGA

InterProScan

SUPERFAMILY
Neuro-gated_channel_TM_sf (IPR036719) - T[167-175] 5.23E-9 - T[202-314] 5.23E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value