- Transcript 'Haaura.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L116.19.v1...' >
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- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1.g14364.02.t
Possible name(s)
CRHR1; CRHR2
Gene model
Location
S1 [652,060 / 660,747]
Amino acid sequence
Length: 705
>Harore.CG.MTP2014.S1.g14364.02.p
MRRDGIYVILVLVVLKISVDSTTATSILSQNVTELPSNPLILDEQSHKVRNLASSRHPVT
RRHNIKSADEEKLENLCELTRNELTNYTNEQRIDFALKRVRTIEVACNWMYTCELLFPQE
GFCPVLVDGLGTCFFPTGLGETAASRCPPFVAGIPYDSLKNVSRTCQRDGTWVTKSNYSE
CKPILDNGIVCDGLKDYFGTGENKLPDDKVDPPCKSHLHNLALIAYVGRGLSLCTLAVAF
VLFWMLRSIRCWRNIIHWNLTASLILRNMFWIFLHSFIHHESRMKNTISCRILVTIFNYT
QATNYFWMFVEGLYLHMMVVLAYTHDRIKLRVYLAIGWGASIPLTLIWIVLKMHFEDHTC
WMHDSTKSKMADYFIQIPIIIMLFANAIILANIVRILVTKLRTGYTTRETKRETVKFKKA
VKAALFLFPLLGVNYVVFFVSPSPDPPGQIIFLYFNTCMQSFQGFFVCTIYCFANSEIQR
AFRKKMNVIYENSCLCCFCKKRPNLNRRRSSVSLSRTTITFLSLKTRDSSVSRQHFCTKS
PVISPRIRSPLVVNRSGGGGIMTSAITTGRRATDRYLQELPVRVCNHQAPGWSAKFTNDE
EVSKEKEESIPLVSVEINREFQVPENIISDHVGLTSKPTDVDVTSRDKIGCTDENTDEWK
DENSSTDNLDQCSEMFTTKECKERPMWPVEINDKYLVDVEIVEEL
Nucleotide sequence
Length: 2,118
>Harore.CG.MTP2014.S1.g14364.02.t
ATGAGGAGAGATGGAATATATGTTATTTTGGTGCTTGTAGTGCTAAAGATTTCTGTGGAT
TCCACAACTGCAACATCTATACTTAGCCAAAACGTTACTGAACTTCCGAGTAATCCATTG
ATATTGGATGAACAGAGCCACAAAGTCAGAAACCTAGCTTCTTCCCGACATCCTGTTACC
CGTCGACATAATATCAAATCGGCTGATGAAGAAAAATTGGAAAATCTATGCGAATTAACA
AGAAATGAACTGACGAACTATACGAACGAACAAAGGATCGATTTCGCATTGAAACGTGTA
AGAACGATTGAAGTTGCTTGTAATTGGATGTACACTTGTGAGCTACTGTTTCCTCAAGAA
GGTTTTTGTCCGGTTCTTGTTGACGGTCTGGGTACCTGTTTTTTTCCGACTGGCCTTGGT
GAAACGGCGGCTAGCAGATGTCCGCCATTTGTCGCAGGAATCCCGTATGACTCTTTAAAA
AACGTGTCACGAACTTGCCAGCGAGATGGAACTTGGGTTACCAAATCCAATTACAGCGAA
TGTAAACCAATTCTTGATAATGGTATTGTTTGCGATGGGCTGAAAGACTACTTTGGAACC
GGTGAAAATAAGCTCCCTGACGACAAAGTGGATCCACCTTGCAAGTCTCATCTCCACAAC
CTGGCTCTTATTGCATATGTGGGAAGAGGTCTATCTCTCTGTACTTTGGCGGTGGCATTT
GTGTTATTCTGGATGCTAAGGAGCATCCGTTGCTGGAGAAATATTATACACTGGAATTTG
ACCGCATCTCTGATTCTGAGAAACATGTTTTGGATCTTTTTGCATTCATTCATACACCAT
GAATCCAGGATGAAAAATACGATTTCATGCCGCATTTTGGTCACAATATTTAATTATACG
CAAGCTACCAATTATTTTTGGATGTTCGTCGAAGGATTATATCTTCACATGATGGTGGTG
CTTGCTTATACTCACGACAGAATCAAACTGCGCGTTTACTTGGCAATAGGATGGGGTGCG
TCCATCCCACTAACTCTAATCTGGATTGTGTTAAAGATGCATTTCGAAGACCACACTTGT
TGGATGCACGATTCGACCAAATCTAAAATGGCTGACTATTTCATTCAGATTCCCATTATC
ATAATGCTATTCGCCAACGCCATAATACTAGCAAACATCGTCCGAATATTAGTAACGAAG
CTGAGAACCGGATACACAACACGCGAGACAAAGAGAGAAACTGTCAAATTCAAAAAAGCA
GTCAAAGCGGCACTCTTTCTCTTCCCTTTACTTGGAGTGAATTACGTGGTATTCTTCGTG
AGTCCTAGTCCGGATCCTCCCGGCCAAATAATCTTCCTGTACTTCAACACATGCATGCAG
TCCTTTCAGGGATTCTTCGTTTGTACGATTTACTGCTTTGCAAACAGTGAGATACAGAGA
GCTTTCCGGAAGAAAATGAACGTGATATATGAGAACAGTTGCCTGTGTTGTTTTTGCAAG
AAGAGACCAAATCTAAACCGCCGTCGCTCAAGTGTGTCACTGAGCCGCACAACCATCACA
TTCCTATCGTTGAAGACTCGTGATAGCAGTGTTTCGCGACAACATTTCTGCACTAAGTCG
CCCGTTATATCACCAAGAATCCGTTCACCGTTGGTCGTGAATCGTTCCGGAGGTGGAGGG
ATCATGACATCCGCTATAACGACCGGCAGGAGAGCTACAGATCGCTACCTGCAAGAACTG
CCGGTTAGAGTGTGCAACCATCAGGCACCCGGATGGTCTGCCAAGTTTACAAATGACGAG
GAGGTTAGCAAAGAGAAAGAAGAGAGCATACCTTTAGTTTCGGTAGAAATCAACAGAGAA
TTCCAAGTTCCAGAAAACATTATTTCGGACCATGTGGGTCTAACGTCTAAACCAACAGAT
GTCGATGTCACATCTCGCGATAAAATCGGATGCACCGATGAAAATACTGATGAATGGAAA
GACGAGAATTCATCTACTGATAACTTAGACCAATGCTCGGAAATGTTCACAACGAAAGAA
TGCAAAGAAAGACCGATGTGGCCAGTGGAAATTAACGACAAGTATCTGGTAGATGTTGAA
ATTGTCGAGGAACTTTAG
| Gene3D |
GPCR_2_extracell_dom_sf (IPR036445) - T[81-191] 4.5E-18 |
| SUPERFAMILY |
GPCR_2_extracell_dom_sf (IPR036445) - T[104-187] 2.09E-17 |
| ProSiteProfiles |
GPCR_2_extracellular_dom (IPR001879) - T[106-185] 12.654 |
| SMART |
GPCR_2_extracellular_dom (IPR001879) - T[119-190] 2.0E-9 |
| Pfam |
GPCR_2_extracellular_dom (IPR001879) - T[122-182] 1.5E-11 |
| ProSitePatterns |
GPCR_2_secretin-like_CS (IPR017983) - T[123-148] . - T[463-478] . |
| PRINTS |
GPCR_2_CRF_rcpt (IPR003051) - T[148-165] 4.2E-14 - T[169-185] 4.2E-14 - T[317-329] 4.2E-14 - T[438-459] 4.2E-14 |
| Pfam |
GPCR_2_secretin-like (IPR000832) - T[219-467] 2.7E-64 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[221-475] 38.622 |
| PRINTS |
GPCR_2_secretin-like (IPR000832) - T[223-247] 2.2E-53 - T[255-279] 2.2E-53 - T[292-315] 2.2E-53 - T[330-355] 2.2E-53 - T[373-398] 2.2E-53 - T[420-440] 2.2E-53 - T[453-474] 2.2E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTH1R_HUMAN | 29.87 % | 176 | 3.28E-47 |
| CRFR1_HUMAN | 37.563 % | 280 | 6.02E-87 |
| CRFR2_HUMAN | 40.541 % | 304 | 8.56E-97 |