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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.582.v1...'
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1.g12182.02.t

Possible name(s)

CHI3L1; CHIT1; CTBS

Location

S1 [414,731 / 417,510]

Sequences

Amino acid sequence

Length: 405

>Harore.CG.MTP2014.S1.g12182.02.p
MLKSVAFCTVFFTAITCSYSFHTNTFGSECKCSNVSLCNRIDVGQRQENVIYAVNLTNFM
HFDWTKISTIVVYEGALTKVGMDVVCQAHLHHARVLIAVSISEEDIKNSTSRKTILNHYL
NVADQFYLDGGNIDFEKETKEPALREALTAFAQETKAAFKSAYPSSIVILDVFWVYNIYH
NEKALANAVDFLFIMAYDEQVDMLLPCVARANSPFAQTQFGVSSFLALGIPGHKLVLGQP
WYGYFYKCNELNEENLCFIDKLNGSCTQTVGSQGEYSEIMNILPHSMGGRQWSKVYKSPF
LNYKTGSGDIVQVWYDDSESLKPKYNLANVWQLRGVGVWDASALNYSLPIRQETKVISLI
HFIEAFGALFLLTPHLYAILWYSNFIVIIIFLNYTRNTSSCFMLD

Nucleotide sequence

Length: 1,703

>Harore.CG.MTP2014.S1.g12182.02.t
AGCCACAGAGCAACTTAGGCAAAAAATCGACGAAGAATGCTGAAATCCGTGGCGTTCTGT
ACGGTTTTCTTCACAGCAATTACATGCTCTTACTCCTTCCACACGAATACATTTGGGAGT
GAATGCAAGTGTTCTAATGTCAGTTTATGCAATCGAATAGACGTGGGACAAAGACAAGAG
AATGTTATATATGCTGTCAATTTGACAAATTTCATGCACTTTGACTGGACAAAAATTTCT
ACAATTGTAGTATATGAAGGGGCACTGACTAAGGTAGGAATGGATGTGGTATGCCAAGCA
CATCTTCATCATGCTCGAGTGCTCATTGCTGTGTCAATATCAGAGGAGGATATCAAAAAC
TCCACTTCGAGAAAAACCATCCTCAACCACTATCTCAATGTGGCAGACCAATTTTATCTG
GATGGGGGAAACATTGATTTCGAAAAGGAGACGAAAGAACCAGCTTTGAGAGAGGCTCTC
ACTGCATTTGCCCAGGAAACGAAAGCCGCTTTCAAATCTGCTTATCCATCTTCAATTGTG
ATTCTAGATGTCTTTTGGGTGTATAATATATACCATAATGAAAAGGCTCTGGCGAATGCC
GTGGATTTTTTATTTATCATGGCTTATGATGAACAGGTCGATATGCTACTGCCATGCGTT
GCCAGAGCCAATTCGCCGTTTGCTCAAACTCAGTTCGGCGTCTCGTCATTCCTTGCTCTC
GGCATACCAGGCCACAAACTTGTCCTTGGTCAACCTTGGTATGGTTATTTCTACAAATGT
AACGAGTTGAACGAGGAAAACTTATGCTTCATTGACAAATTGAATGGCAGCTGCACACAG
ACAGTCGGAAGTCAAGGGGAATACAGCGAAATTATGAACATACTACCGCATTCGATGGGA
GGAAGACAATGGAGTAAAGTTTATAAATCTCCTTTTCTTAACTACAAAACGGGAAGTGGG
GACATAGTGCAAGTTTGGTACGATGATTCCGAGAGCTTAAAACCCAAATACAATCTTGCT
AATGTTTGGCAGCTACGAGGCGTTGGGGTCTGGGATGCTAGTGCGCTCAATTACTCCCTG
CCGATCCGTCAAGAAACAAAAGTAATTTCGCTTATTCATTTCATTGAAGCCTTCGGAGCC
CTATTTCTCCTGACACCTCATCTCTATGCAATCTTATGGTACAGCAATTTCATTGTAATC
ATCATATTTTTAAATTATACGAGAAATACTTCATCATGTTTTATGCTCGATTAGTAGTGT
GCAAGTAAATAAAATATCATCACTATAATTATTCTTGGTTATGGCTTCAAGACAGGTAAA
TAAAAAACAAGTGGATGTATGATGGCTGTAAAGGATTCCAGTATATACAAGTAGGGCCCT
TGTAAGGAATTTATTTCAAATGTAAATTTGGAGGCACAAAGTTTTGAGAACACTCAGCTC
AGAAATAGTTCTCATGATAAACTGCTAGTGCATGATCTGGATCAGGGTGGTCCAAGATTA
CCAGCATGAAGGGCCACAAAAGGTTTGAGGAAAACCTTGCGGGCCACATACTGGGAAACT
CCCCGACTTTTGGAACCAGTTAATAACGTAGTACGAGGTATGAAGACTATACATAAGACG
ATTCGCGGATAAGTAAACCCTTAAAATAAGGCAACACCACTTCCTTCCAAATAATTTGTA
TGTTTAAATTAGCATTCAAGTAA

InterProScan

SMART
Chitinase_II (IPR011583) - T[47-344] 5.2E-5
SUPERFAMILY
Glycoside_hydrolase_SF (IPR017853) - T[68-242] 2.11E-27 - T[316-343] 2.11E-27
Pfam
Glyco_hydro18_cat (IPR001223) - T[105-342] 1.6E-22
Gene3D
Chitinase_insertion_sf (IPR029070) - T[243-316] 6.9E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DIAC_HUMAN 34.848 % 209 7.37E-64