Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S3...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S11...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1.g09882.01.t

Possible name(s)

AVL9; KIAA1147

Gene model

Harore.CG.MTP2014.S1.g09882

Location

S1 [409,027 / 414,084]

Sequences

Amino acid sequence

Length: 460

>Harore.CG.MTP2014.S1.g09882.01.p
MSDEDTKPLLSEEESQTSRSTRSRRMSPTSQVRHLLKLQRKPRYITNGNGYGDDELSGDQ
INISASNSTNELGEDPPDDIVSVFIVEFDIKTGNMMEWYLPEDCDMQGVEFKAMPSGAHT
VTSDFLYFKKGNLYGVSCYEKMKLDSQEERGVRMKSVGILATSYTMLHKHLPFLEQQVGH
QLQTPGTYQQLAAFYEDKKGLLPLSVTNDNESAQTKAIVSNPGSDENDFPDMTITHPVGC
FLHFIRFFGEQVMILWKLTLLQKRILFFSPPPIGVVCYRVYCTSCLARHSFKKQARKNSK
PYFYVNIADIEYLETEMSYIACTTEKIFEEKPHLYDVYVDNRVIKSSNPDFKDVLTINRS
DTEKYQQLMNHRQEHLYLDKIGEAEHRNEEQMFISFFSEQNNRLFSTLFDISSSDNRTLT
SEHMQAMGLDPVGDRQFILMVLALYDIDVLMVIDTPCCPI

Nucleotide sequence

Length: 2,457

>Harore.CG.MTP2014.S1.g09882.01.t
CTTCACTGCAGTATACGAATCCTATTCGATACGAGTACGCTTCATAGGAATAAACAAGCA
TGAGCGATGAAGACACAAAACCTCTGTTATCAGAGGAGGAAAGCCAAACTTCGCGCAGTA
CGAGATCTCGGCGAATGAGTCCCACGTCACAAGTTCGGCATTTGCTCAAGTTACAACGCA
AGCCTCGTTACATTACTAACGGCAATGGCTACGGCGATGATGAACTTTCCGGCGACCAAA
TCAATATTTCTGCGAGTAATTCAACCAACGAATTAGGCGAGGACCCTCCTGACGACATAG
TCTCCGTTTTCATCGTCGAGTTTGACATAAAGACAGGTAACATGATGGAATGGTATTTGC
CAGAGGACTGCGACATGCAGGGTGTTGAGTTCAAGGCGATGCCGAGCGGCGCTCACACAG
TCACCTCAGATTTTTTGTATTTTAAAAAAGGAAACCTTTATGGTGTGAGCTGCTATGAGA
AGATGAAGCTCGACTCCCAAGAAGAAAGGGGAGTCAGAATGAAATCTGTCGGGATATTGG
CAACGTCCTACACGATGCTTCACAAACACTTACCATTCCTGGAACAACAAGTTGGGCATC
AACTCCAGACTCCAGGAACCTACCAACAATTGGCGGCTTTTTATGAGGATAAGAAAGGAC
TCTTGCCATTGTCCGTGACGAACGACAACGAATCTGCGCAGACCAAGGCGATTGTTTCTA
ATCCCGGCTCCGACGAAAATGATTTTCCAGACATGACGATCACTCACCCTGTGGGTTGTT
TTCTGCATTTCATACGATTTTTTGGTGAACAAGTCATGATATTGTGGAAACTGACGCTCC
TACAGAAGCGAATATTGTTTTTTTCTCCTCCTCCAATTGGTGTCGTATGTTACAGAGTCT
ATTGCACGTCGTGCCTGGCAAGGCACAGCTTCAAAAAACAAGCGAGAAAAAACAGCAAAC
CTTACTTTTATGTGAACATAGCCGACATAGAATACCTTGAAACTGAAATGTCTTACATTG
CATGTACGACTGAAAAAATTTTTGAAGAAAAACCGCATTTGTACGACGTCTACGTCGATA
ACAGAGTCATAAAATCTTCTAACCCAGATTTTAAAGATGTTTTGACAATAAATCGATCTG
ACACAGAAAAATATCAACAGTTAATGAATCACAGACAAGAACATTTATATCTTGATAAAA
TCGGCGAGGCGGAGCATAGAAATGAAGAGCAGATGTTTATTTCTTTTTTCTCAGAACAAA
ACAACAGACTATTTTCAACACTGTTCGACATATCTTCTTCTGACAACCGGACCCTCACAT
CAGAGCACATGCAAGCAATGGGTCTCGATCCCGTTGGAGACAGACAGTTTATCTTAATGG
TTCTCGCGCTGTACGATATCGACGTCCTAATGGTTATCGATACGCCGTGTTGCCCGATAT
AGCATGTCGATCCGAGATCATATTGCAGTAGTAGGAATTGGTATTATTAGGAAATTGTCA
CGGCTAGTCTTCAATAATTCATTCAGATCTCGTTTTTTATGCTCGACCTACGCAAGCCTA
CGGAACTTTAACAGGTATGTTTATTACATTATAAGAAAGTTAGAATCTGATCAGAAGTGT
TTCTAGATCAGTGGTTACTGATATATAGTAAATAAAGTGAGTGTTTGATTAGGAAAAGGT
TGGAACAACTGACCTAGAATGTAATGAAATTAAATGCTGATCTCTTTGCTTAACTTTATG
CACAAATCATGCAATTTATCAAGTTACTATTGGATTCTCTACTTATTGCTAATCGAAATA
AATATCACAACAATTTTGTCAAATATTCTAAATAGCTAATATCAGATATATATTGTATAG
ATTGAATACTCCTAATTTATTTTTATTGTAATATCTCATCAAAGTGGTAGGTAATTGCAT
TTTTTTCTTGTCATTGTAGTTATGATTGCCATAGACATCTTTTTTCTTCAGCTATCCGCA
CTCTTTTTATATATCCAGATCAGGGTGGTCTAAACACTGTCACCGCATGCGGCCCGCGGA
CACATTCTGTGCGGCATGCAGAGCACTTTTGGTATACTGTACATGAAACCATTTCCTAGA
ATCTAGCTTTACTAGTTGTAATTGCAGGCAATGAACCATTGTGTCATTACATTGCTGTAG
TGAAGCAATAAAGAACATGAACTTGTTGCTGCAGTAAGCTGTGCGTTGCTTATCTAACCT
TGGCTCAGTATCAGATACTCGTAAAATTTTACTTGAATGCTAATTTAAACATACAAATTA
TTTGGAAGGAAGTGGTGTTGCCTTATTTTAAGGGTTTACTTATCCGCGAATCGTCTTATG
TATAGTCATACCTCGTACTACGTTATTAACTGGTTCCAAAAGTCGGGGAGTTTCCCGTAT
GTGGCCCGCAAGGTTTTCCTCAAACCTTTTGTGGCCCTTCATGCTTGGACCACCCTG

InterProScan

ProSiteProfiles
Tripartite_DENN (IPR037516) - T[81-460] 26.782
Pfam
DUF2347 (IPR018626) - T[83-343] 3.9E-74

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LCHN_HUMAN 53.964 % 422 2.38E-145