- Transcript 'KH2012:KH.C14.52.v1....' >
- Transcript 'Cisavi.CG.ENS81.R143...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Mooccu.CG.ELv1_2.S71...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1.g06718.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S1 [957,287 / 958,661]
Amino acid sequence
Length: 378
>Harore.CG.MTP2014.S1.g06718.01.p
MSDGEEDQTAIVCDNGSGLVKSGFAGDDAPRAVFPSTVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
SKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Harore.CG.MTP2014.S1.g06718.01.t
ATGTCTGACGGTGAAGAAGATCAAACCGCCATCGTCTGCGACAACGGATCAGGATTGGTC
AAATCTGGTTTCGCCGGTGATGACGCTCCCAGAGCTGTTTTTCCATCCACCGTCGGACGA
CCAAGACATCAAGGTGTCATGGTTGGTATGGGACAGAAAGACAGTTATGTCGGTGATGAA
GCACAAAGTAAAAGAGGAATTCTCACTCTCAAATATCCAATTGAACATGGAATCATTACA
AACTGGGACGATATGGAAAAGATTTGGCATCATACTTTCTACAATGAACTTCGTGTTGCT
CCTGAAGAACATCCCACTCTTCTTACGGAAGCTCCACTCAATCCTAAAGCCAACAGAGAG
AAGATGACTCAGATTATGTTTGAAACTTTCAACGTTCCGGCAATGTACGTCGCTATTCAA
GCTGTTCTTTCGCTTTATGCATCAGGAAGAACTACAGGAATCGTTTTGGATTCTGGAGAC
GGTGTTTCACATAACGTGCCAATTTATGAAGGATACGCTCTTCCACATGCAATTGCAAGA
CTCGATCTTGCCGGACGTGATCTCACTGATTATCTTATGAAGATTCTCACAGAGAGAGGA
TATTCATTCGTTACAACTGCTGAACGAGAAATTGTCCGAGATATCAAAGAAAAGCTCTGT
TATGTTGCTCTGGACTTTGAACAAGAAATGGCAACTGCCGCCTCGTCTACTTCTCTTGAA
AAAAGTTACGAATTACCAGATGGTCAAGTGATTACAATTGGTAATGAAAGATTCCGATGC
CCTGAAACTCTTTTCCAACCATCCTTCATTGGAATGGAATCTGCTGGCATCCATGAAACG
ACATACAATTCAATTATGAAATGTGACATCGATATTCGCAAAGATCTTTACGCCAACAAC
GTTTTATCAGGAGGAACCACTATGTATCCTGGTATTGCTGATCGTATGCAAAAAGAAATC
ACAGCCCTGGCTCCAAGTACAATGAAGATTAAAATCATTGCTCCTCCAGAAAGAAAGTAT
TCGGTATGGATCGGAGGTTCCATTTTGGCATCTCTTTCGACCTTCCAACAAATGTGGATC
AGCAAACAAGAATATGACGAAGCTGGTCCATCAATCGTTCATAGGAAATGTTTCTAA
| PANTHER |
Actin (IPR004000) - T[5-377] 1.5E-265 |
| Pfam |
Actin (IPR004000) - T[7-378] 6.1E-148 |
| SMART |
Actin (IPR004000) - T[8-378] 1.8E-233 |
| PRINTS |
Actin (IPR004000) - T[29-38] 4.8E-57 - T[52-63] 4.8E-57 - T[64-86] 4.8E-57 - T[118-131] 4.8E-57 - T[143-162] 4.8E-57 - T[239-255] 4.8E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.326 % | 766 | 0 |
| ACTS_HUMAN | 96.791 % | 763 | 0 |
| ACTC_HUMAN | 97.326 % | 766 | 0 |