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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'
  2. Transcript 'Cisavi.CG.ENS81.R11....'
  3. Transcript 'KH2012:KH.L134.22.v1...'
  4. Transcript 'Moocci.CG.ELv1_2.S27...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S19.g03521.02.t

Possible name(s)

CYP11A1; CYP24A1; CYP27A1

Location

S19 [238,519 / 240,668]

Sequences

Amino acid sequence

Length: 260

>Harore.CG.MTP2014.S19.g03521.02.p
MSLYRSNIHSGRYRQKLQSPLLHTRLRLVIPIFTFMLLWLEVNSYKFMTSTNMRRGVKDT
KIFHTKEETSGSYGPDYPKSRKRRELPSAEETQRAVDKHNEFRGIIGDEGEEPIPSNMMY
MTWDPSLAINALRYAKKCIWEHSQDHERATTHFPGWNGENLWAGHGHFTDDFDPTVGMTS
WYNEYKDYDFYSHNCTPKKLCGHYTQTVTKSVSLRSSGLIRTNLAALGRFAVVSIHLLEK
YGLMQHTQYVITRPGKTTTS

Nucleotide sequence

Length: 783

>Harore.CG.MTP2014.S19.g03521.02.t
ATGTCACTTTATCGATCCAATATTCACTCCGGGAGATATAGACAGAAATTGCAGAGTCCT
TTATTGCATACTCGCCTTCGACTCGTGATTCCAATATTTACCTTTATGTTATTATGGCTC
GAAGTGAATAGCTACAAGTTCATGACCAGCACCAATATGAGGAGAGGCGTGAAAGATACG
AAGATTTTTCACACTAAAGAAGAAACATCTGGAAGTTATGGTCCGGATTACCCAAAATCA
CGGAAAAGAAGAGAATTACCGTCAGCAGAAGAAACACAGCGAGCGGTCGATAAACATAAT
GAATTTCGGGGGATCATAGGAGACGAAGGAGAAGAACCTATTCCATCTAACATGATGTAC
ATGACATGGGATCCTTCTTTGGCTATAAACGCTCTACGGTATGCAAAGAAATGTATCTGG
GAGCATAGTCAAGATCACGAAAGAGCAACTACTCATTTTCCGGGATGGAATGGAGAGAAT
CTTTGGGCTGGACACGGTCATTTTACAGATGATTTCGACCCAACTGTTGGAATGACATCT
TGGTATAATGAATACAAAGATTATGATTTTTATTCGCACAACTGTACTCCCAAAAAACTG
TGCGGTCATTACACTCAGACTGTAACTAAATCTGTATCGCTTAGGTCGTCTGGTTTGATT
CGTACAAACTTGGCTGCGCTTGGACGATTTGCAGTAGTTTCGATACACTTGCTGGAGAAA
TATGGACTGATGCAGCATACACAGTATGTCATTACGCGCCCGGGTAAAACAACAACTTCA
TGA

InterProScan

Gene3D
CAP_sf (IPR035940) - T[79-214] 2.1E-28
SUPERFAMILY
CAP_sf (IPR035940) - T[87-212] 1.09E-29
PANTHER
Allrgn_V5/Tpx1 (IPR001283) - T[88-208] 8.8E-24
SMART
CAP_domain (IPR014044) - T[90-239] 3.6E-14
Pfam
CAP_domain (IPR014044) - T[97-211] 2.3E-12
PRINTS
Allrgn_V5/Tpx1 (IPR001283) - T[121-139] 8.1E-5 - T[177-190] 8.1E-5 - T[201-217] 8.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PI16_HUMAN 35 % 79.3 7.09E-17
GPRL1_HUMAN 36.207 % 75.9 2.49E-16