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TRANSCRIPT CARD

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  1. Clone 'mae24b17' > 
  2. Transcript 'Moocci.CG.ELv1_2.S51...' > 
  3. Transcript 'Moocci.CG.ELv1_2.S51...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S196.g02375.01.t

Possible name(s)

ATAD5; CHTF18; RFC1

Gene model

Harore.CG.MTP2014.S196.g02375

Location

S196 [58,897 / 72,329]

Sequences

Amino acid sequence

Length: 922

>Harore.CG.MTP2014.S196.g02375.01.p
MDFDTYLGYNEEEAYEDQYAEEMKMLNDLEGLPKPNTDTSSSSQTHNHSSNESSKKKLFD
DAGPSHCSENHLLNNGFENDLIIDEELFETSPKRKRLKMDIGFEKKHNLPTTLDEDREAF
EMRQKQRNTSNMPDSPAMIERILRYRENKIKDIDNKEFLNKDIHNSTQTSRLQLTKVLVR
PPVYCDFISSTSSDGDRFYMRIHPEEELYKRENKILSESHRLTEQIRRQNVGIINEGDLS
NDVTNSSSARNDSMSQDAQRMTEAVMDTDEGEDENTRHALWLNKYAPTQYTHLLSDESVN
RALLKWLKMWDHVVFGRELPQKKVNKNPEEIKKQAYGFKKTFQHNNFEDKFDDYNRPHWK
IVLLYGPPGLGKTTLAHIIAKHAGYHVVEMNASDDRSAEAFRNKLEETTQMRSVLGYDQR
PNCLIIDEIDGAPVAAINVLLAAVNMVKKGKQAGTRKKRAQNNILLRPVICICNDLYAPA
LRQLRQHSLLLQFPPTQTARLASRLTQLCRLQQLQCDLTSLLTLCEKAENDIRSCINTLQ
FLKSCGTTKLDIHAIKNMNVGQKDQHKSIFNVWQEIFQLPKTKRKMEKNAEAVQLDSQLS
QQKLTVLATRFYTIYHVVLSNGEYDKTLQGVYENFLKMKFKDHDLACLNKAQEWLQFQDV
QSTFITRHQDWTVMKFSPFIFVLFHMLFACVSVPRITFPTQKFENTKRVQNCANLLESMY
SDMFPIARCFMHTRAAILDSIPYILEIMVPSIRPVNTQLFSPAEKKLVKDLVNTMLAYNL
TYRQERNEDGQYKYVLEPNVAEICFFSGTHEHRKLSYATMQMISKEVETERIRRSEHIME
VSVRHVEPKSMHEKPKPVDKPIEVSKPQPEKDSTPNHLQRLDKNISNASHSKEKPVFDFF
SKFKKVRKVVLIGENGESSSLY

Nucleotide sequence

Length: 2,769

>Harore.CG.MTP2014.S196.g02375.01.t
ATGGATTTTGATACATATTTAGGTTATAATGAGGAGGAAGCCTATGAAGATCAGTATGCT
GAAGAAATGAAGATGCTCAACGATCTGGAAGGATTGCCAAAGCCAAATACTGATACATCT
TCAAGTTCTCAAACACACAACCACAGTAGCAATGAATCGAGCAAAAAAAAACTGTTTGAT
GACGCTGGACCATCACATTGTTCAGAAAATCATCTGTTAAATAATGGATTTGAAAATGAC
TTGATTATTGATGAAGAGTTGTTTGAGACATCTCCAAAACGAAAAAGACTAAAAATGGAT
ATAGGCTTTGAAAAGAAGCACAACCTGCCCACAACACTTGATGAAGATCGCGAAGCGTTT
GAAATGAGGCAAAAGCAAAGAAATACTAGCAACATGCCTGATTCTCCAGCAATGATAGAA
AGAATATTAAGATACAGGGAGAATAAAATCAAAGATATCGATAATAAAGAATTTTTGAAC
AAAGACATTCACAACTCAACACAGACAAGTAGGTTGCAGTTAACAAAGGTTTTGGTTAGA
CCTCCGGTATACTGCGACTTCATTTCTTCAACTTCCTCTGATGGGGATAGGTTTTACATG
AGAATCCATCCAGAGGAGGAATTATATAAGCGGGAAAACAAAATTTTATCCGAATCTCAT
CGCTTAACTGAACAGATACGAAGACAAAATGTCGGTATCATCAATGAAGGTGACTTGTCA
AACGATGTCACAAATTCCAGCTCTGCTCGGAATGATAGCATGTCGCAAGATGCTCAAAGG
ATGACTGAGGCTGTGATGGATACTGATGAAGGTGAAGATGAAAATACAAGACATGCCTTA
TGGTTGAACAAATATGCACCGACGCAATACACGCATTTATTGAGTGACGAGAGTGTAAAC
AGGGCACTTCTCAAATGGCTTAAAATGTGGGATCATGTGGTGTTTGGCCGTGAATTGCCA
CAGAAGAAGGTCAACAAAAATCCAGAGGAAATAAAAAAACAAGCCTACGGATTCAAAAAG
ACTTTCCAACATAATAATTTCGAGGATAAATTCGATGACTACAATAGACCTCATTGGAAG
ATTGTCCTATTATACGGACCTCCTGGATTGGGAAAGACAACTCTAGCTCATATTATTGCA
AAGCATGCTGGATATCATGTGGTGGAAATGAATGCTAGTGATGATCGCAGTGCCGAAGCT
TTCAGGAATAAATTAGAAGAAACAACACAAATGCGGTCAGTTCTTGGCTATGACCAGCGT
CCAAATTGTCTCATCATAGATGAAATTGATGGAGCTCCTGTGGCTGCCATTAACGTTTTA
CTCGCTGCAGTGAACATGGTTAAGAAAGGAAAACAAGCCGGGACAAGAAAAAAAAGAGCC
CAAAATAATATTCTGCTTCGTCCAGTTATCTGCATATGTAATGATTTGTATGCACCTGCT
CTCCGTCAACTCCGTCAGCATAGCTTGCTATTGCAGTTTCCACCAACACAGACCGCTCGA
CTTGCTAGCAGACTCACACAATTATGTCGTCTTCAACAATTGCAATGCGATCTGACATCT
TTATTAACTCTTTGTGAGAAGGCGGAAAACGATATTCGATCATGTATCAACACTCTGCAG
TTCTTGAAGTCTTGTGGAACCACTAAACTCGACATACATGCCATTAAGAACATGAACGTT
GGACAGAAGGATCAGCATAAAAGCATATTTAATGTATGGCAGGAAATATTCCAACTTCCT
AAAACGAAAAGGAAAATGGAGAAAAATGCAGAAGCGGTGCAGCTCGATTCCCAATTATCA
CAACAGAAACTGACAGTTCTAGCCACACGATTTTATACCATTTATCATGTTGTTTTGTCA
AACGGCGAGTATGATAAAACTTTACAGGGTGTGTATGAAAATTTCCTCAAAATGAAATTC
AAAGACCACGATTTGGCTTGCCTGAACAAAGCTCAAGAGTGGTTGCAATTTCAGGATGTT
CAATCTACCTTCATCACTCGTCATCAGGACTGGACAGTGATGAAATTCTCTCCTTTCATA
TTTGTTCTGTTCCATATGTTATTTGCATGTGTGAGCGTACCCCGCATCACTTTCCCGACT
CAGAAGTTTGAGAACACGAAGCGTGTACAGAATTGTGCCAATTTGTTAGAATCTATGTAT
AGCGATATGTTTCCAATCGCTAGATGCTTCATGCATACACGTGCCGCAATATTGGATTCC
ATACCATACATTCTAGAGATCATGGTGCCATCGATACGACCGGTAAACACACAGTTGTTC
AGCCCTGCTGAAAAAAAACTCGTCAAAGACTTGGTCAATACCATGCTTGCCTACAATCTG
ACATACAGACAAGAGAGAAATGAAGATGGACAGTATAAATATGTGCTTGAACCGAATGTT
GCAGAAATTTGCTTTTTCTCTGGAACTCATGAGCATCGTAAGCTCTCCTATGCCACCATG
CAAATGATCTCGAAGGAGGTTGAAACAGAACGTATTCGAAGGAGTGAACACATCATGGAG
GTGTCTGTCAGGCATGTTGAACCAAAATCCATGCATGAAAAACCAAAACCGGTGGATAAA
CCGATAGAGGTATCAAAACCACAGCCGGAGAAAGATTCTACTCCGAATCATTTGCAGAGA
CTGGACAAGAACATATCTAACGCTTCACATTCTAAAGAGAAGCCTGTCTTCGATTTCTTC
AGCAAATTCAAAAAAGTGAGAAAAGTTGTTCTGATTGGAGAAAATGGAGAAAGTTCTTCC
CTCTACTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[280-316] 3.52E-31 - T[347-549] 3.52E-31
SMART
AAA+_ATPase (IPR003593) - T[358-494] 8.2E-11
Pfam
ATPase_AAA_core (IPR003959) - T[362-461] 6.6E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CTF18_HUMAN 40.051 % 535 7.56E-176
RFC1_HUMAN 25.298 % 105 3.89E-23