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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R16....' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S18.g14898.02.t

Possible name(s)

PAF1

Gene model

Harore.CG.MTP2014.S18.g14898

Location

S18 [148,314 / 150,772]

Sequences

Amino acid sequence

Length: 499

>Harore.CG.MTP2014.S18.g14898.02.p
MAPVPTIQNQGKGGEDQRRSRGTVERAGLTTRVKYCNTLPDIPFDPKFIRYPFEANRFVE
YKPTTLEKQHKIDLHTDHDLGVTIDLINPDTYKIDAKQWLDPADEALLEEDLPAPQDSKR
SKQHSINVSWLRRSEYISQEFNRYGANAVNIETRIGAGVKDLFKEEDLYKDRDSQIAAIQ
KTFVDAKVDIKKHYSKPNVYAVDVLPIYPDFKMWQHPSAQVIFDTDPAVKSGSVQQQMEE
MSQAMIRGMVDEEGDQFVAYFLPTIETLQKRKTDVEEVMDYNPEETYDYKLAREYNWNVK
NKASKGYEENYYFVMREDGVFYNELETRVRLSKRRAKGGGGLQSATNAVLAVHHRELNDQ
EVAAQEMRRMQLEPLEADDEEEEDNAEEEDEVADQDEDEQKTAEDSSGEEDNQKTTAGET
SQTNSDSESEEEAKETTEDDRKSNGDGSNDERNSNEESTEEQQNDAASSDSSEEEEEDGK
ENRQAQEIFGSESDSSDSD

Nucleotide sequence

Length: 1,500

>Harore.CG.MTP2014.S18.g14898.02.t
ATGGCACCGGTTCCAACCATTCAGAACCAAGGAAAAGGAGGTGAAGACCAACGAAGATCT
CGTGGAACAGTAGAAAGAGCAGGTTTGACAACGCGTGTCAAATATTGCAATACTCTACCG
GATATTCCGTTCGATCCCAAATTCATTCGTTATCCATTCGAAGCAAACAGATTCGTCGAG
TACAAGCCTACGACTCTAGAAAAACAACACAAAATTGACCTGCATACAGATCACGATCTT
GGTGTTACGATTGATTTAATAAATCCAGACACTTACAAAATAGATGCAAAACAATGGTTA
GACCCGGCAGATGAGGCACTATTGGAAGAGGATTTACCCGCCCCTCAAGATTCTAAAAGA
TCAAAACAACACAGCATCAATGTATCATGGTTGAGAAGAAGCGAATACATTTCCCAAGAA
TTCAATAGATACGGAGCAAACGCCGTTAATATAGAAACTCGAATTGGTGCCGGTGTCAAA
GATTTATTCAAGGAAGAAGACTTATACAAAGACAGAGACAGTCAAATAGCAGCCATACAA
AAAACATTTGTAGACGCCAAGGTCGACATCAAGAAGCACTACAGCAAACCTAATGTATAT
GCAGTCGATGTTTTACCAATTTATCCAGATTTCAAGATGTGGCAACATCCAAGTGCCCAG
GTCATCTTTGACACCGATCCAGCAGTAAAGAGCGGGTCTGTACAGCAGCAGATGGAAGAA
ATGTCTCAGGCAATGATTAGGGGTATGGTTGATGAAGAGGGAGACCAATTCGTTGCCTAC
TTCCTTCCTACCATCGAAACACTGCAGAAAAGAAAAACAGATGTAGAAGAAGTGATGGAT
TACAATCCTGAGGAGACGTATGATTATAAGCTTGCGAGAGAATACAACTGGAACGTGAAG
AACAAGGCTTCAAAGGGCTACGAAGAGAACTATTACTTTGTTATGCGAGAGGACGGTGTT
TTCTATAATGAATTAGAAACGAGGGTGCGGCTGAGCAAACGCAGAGCTAAAGGTGGAGGA
GGTTTACAATCAGCTACGAATGCTGTGCTGGCCGTTCACCACAGGGAACTTAATGATCAG
GAGGTCGCTGCGCAGGAAATGAGAAGGATGCAGTTGGAGCCTTTGGAGGCAGACGATGAA
GAGGAAGAAGATAATGCAGAGGAGGAAGATGAAGTAGCAGATCAGGATGAAGATGAACAG
AAGACAGCTGAGGATTCTTCTGGAGAAGAGGATAATCAGAAAACCACAGCAGGGGAAACT
TCACAGACTAATTCAGATTCTGAAAGTGAAGAGGAAGCCAAAGAAACGACTGAAGATGAT
AGAAAATCAAATGGGGACGGTAGTAACGATGAGAGGAACAGCAATGAAGAATCCACAGAA
GAGCAGCAGAATGATGCCGCATCTTCAGATTCCTCCGAGGAAGAAGAAGAAGACGGCAAA
GAGAATCGTCAAGCACAAGAGATCTTTGGTAGTGAAAGCGATTCTTCTGATTCTGATTGA

InterProScan

PANTHER
RNA_pol_II-assoc_Paf1 (IPR007133) - T[15-412] 4.7E-142 - T[421-476] 4.7E-142
Pfam
RNA_pol_II-assoc_Paf1 (IPR007133) - T[31-433] 1.7E-144

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PAF1_HUMAN 56.212 % 513 3.24E-179