- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S18.g10655.02.t
Possible name(s)
ATP5F1B; ATP6V1B1; ATP6V1B2
Gene model
Location
S18 [216,941 / 220,644]
Amino acid sequence
Length: 518
>Harore.CG.MTP2014.S18.g10655.02.p
MLNSVRNCFRALHYGKSITTNGARATTAISQRNYTPEAAAAKKKDTGLVGEIVAVIGPVV
DVQFTGGRPPILNALEVVGRETKLVLEVAQHLGQNTVRTIAMDSTQRLVRGQKCVDTGDS
IMVPVGPATLGRIINVIGEPIDERGPVESKSYASIHASPPDLIETGGAQEILETGIKVVD
VLAPYARGGKIGLFGGAGVGKTVFIMELMNNIAKAHGGYSVFAGVGERTREGNDLYHEMI
DSGVISLKDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRF
TQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPS
PATTFSHLDATTVLSRQISELGFYPAVDPLESSSRIMDPNIVGREHYDTASRVKKILQDL
KSLQDIIAILGMGELSQEEKLTVTRARKIQRFLTQPFQVAETFTGTPGKLVSLKDAIKGF
NMILDGELDHIPEVAFYMVGDIDEVQVKAEALAQELAA
Nucleotide sequence
Length: 1,973
>Harore.CG.MTP2014.S18.g10655.02.t
GTAATTATAATGTGATTTCGGTTCCTGATTTGTCACGAAGAAACGTCACCCGTTCCGCCC
CAGTGCGTAATACCGGCATTGGGCACGCTGAACCTATTTATCAGGGGCAAGGTCGCAGTG
ATACATCAGCAACCGATAAGAACAGGTGAATCAGTTGTGGTTTGCCATAGTTTTCTTGAT
TTTGCTGTGATAAACAACATTATCCTCGAGTAGTTTTATTAAGTTAATTGAATACTTCGT
TCACCATGTTGAATTCGGTTCGGAACTGTTTTCGTGCGTTGCATTATGGCAAATCTATCA
CGACCAATGGTGCTCGCGCGACTACTGCTATAAGTCAACGCAATTACACCCCTGAAGCTG
CGGCTGCTAAGAAAAAAGATACAGGTTTGGTTGGAGAGATTGTGGCTGTAATTGGACCAG
TTGTTGATGTCCAGTTCACTGGAGGAAGACCACCCATCCTGAATGCCCTGGAAGTTGTGG
GCAGAGAAACAAAATTGGTGTTGGAGGTTGCTCAGCATCTTGGTCAGAACACTGTTCGTA
CAATTGCTATGGATTCTACCCAGCGTTTGGTCCGTGGACAAAAGTGTGTTGACACAGGCG
ACTCCATCATGGTCCCTGTTGGCCCAGCAACTCTTGGACGAATCATCAATGTCATCGGTG
AGCCCATCGATGAACGTGGTCCGGTTGAATCCAAAAGCTACGCTTCTATTCATGCATCTC
CACCCGATTTGATTGAAACCGGAGGTGCACAAGAAATTCTCGAGACTGGTATCAAGGTTG
TGGACGTGCTTGCCCCTTATGCTAGGGGAGGAAAAATTGGTCTTTTCGGAGGAGCAGGTG
TCGGCAAGACGGTGTTCATCATGGAACTGATGAACAACATTGCTAAGGCTCACGGAGGTT
ATTCAGTTTTTGCTGGAGTCGGTGAAAGAACTAGAGAGGGCAACGACTTGTACCACGAGA
TGATTGATTCTGGAGTCATTTCACTTAAAGATAAATCGTCAAAGGTCGCCCTTGTGTACG
GACAAATGAATGAACCGCCCGGTGCCAGAGCTCGTGTTGCCTTGACCGGTCTGACCGTTG
CCGAATACTTCCGAGATGAAGAAGGGCAGGACGTGTTGCTTTTTATTGACAACATTTTCA
GATTTACACAAGCTGGTTCAGAGGTTTCTGCCTTGCTTGGTCGTATTCCATCTGCTGTCG
GTTACCAGCCAACTTTAGCCACTGATATGGGTACCATGCAGGAAAGAATTACAACTACCA
AAAAGGGATCCATCACATCTGTGCAGGCTATCTATGTACCTGCTGACGATTTGACAGATC
CCAGTCCAGCAACGACCTTCTCTCACTTGGACGCTACCACTGTATTGTCGCGTCAGATTT
CAGAGTTGGGTTTCTACCCCGCTGTAGACCCTCTGGAATCGTCCTCTCGTATCATGGACC
CCAACATTGTTGGAAGAGAGCATTATGACACCGCTAGTAGAGTAAAAAAGATCTTGCAGG
ATTTGAAGTCGCTTCAAGATATTATTGCTATCTTGGGTATGGGTGAACTGTCACAAGAAG
AAAAACTAACCGTCACCCGGGCACGTAAAATCCAAAGGTTTTTAACACAACCATTCCAGG
TAGCGGAGACTTTCACAGGAACTCCAGGTAAACTCGTATCATTGAAAGATGCCATTAAAG
GTTTTAATATGATTCTCGATGGCGAGTTGGATCACATACCAGAAGTCGCATTTTACATGG
TCGGTGACATCGACGAGGTGCAAGTAAAAGCTGAAGCACTCGCGCAGGAGTTGGCGGCAT
AGAAATTTATTTAAAATTTTGTTTATCGGTAGTGATCTTTCTTTCCATTTTCAGCAATTA
CCAATATCCAATTTGATTTCCTGCAAGAAATTTGTTCCAGAAATGTATTGAAAAAGTTCA
CTTTCAAACTAAGATTCGTGCTGTTCATTTTTCAAATATAAGAAAATATACCA
| Hamap |
ATP_synth_F1_bsu (IPR005722) - T[47-512] 55.026 |
| SUPERFAMILY |
ATPase_F1/V1/A1_a/bsu_N_sf (IPR036121) - T[47-119] 1.12E-23 |
| TIGRFAM |
ATP_synth_F1_bsu (IPR005722) - T[49-512] 2.5E-238 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_N (IPR004100) - T[52-118] 5.1E-21 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[123-399] 4.72E-88 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_nucl-bd (IPR000194) - T[175-394] 3.8E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[187-379] 5.4E-6 |
| ProSitePatterns |
ATPase_a/bsu_AS (IPR020003) - T[385-394] . |
| Gene3D |
ATPase_F1/V1_b/a_C (IPR024034) - T[397-517] 1.8E-55 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VATB2_HUMAN | 25.91 % | 115 | 1.28E-27 |
| VATB1_HUMAN | 25.143 % | 117 | 4.74E-28 |
| ATPB_HUMAN | 79.424 % | 778 | 0 |