- Transcript 'KH2012:KH.C3.87.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S18.g10655.01.t
Possible name(s)
ATP5F1B; ATP6V1B1; ATP6V1B2
Gene model
Location
S18 [216,948 / 220,477]
Amino acid sequence
Length: 426
>Harore.CG.MTP2014.S18.g10655.01.p
MLNSVRNCFRALHYGKSITTNGARATTAISQRNYTPEAAAAKKKDTGQNTVRTIAMDSTQ
RLVRGQKCVDTGDSIMVPVGPATLGRIINVIGEPIDERGPVESKSYASIHASPPDLIETG
GAQEILETGIKVVDVLAPYARGGKIGLFGGAGVGKTVFIMELMNNIAKAHGGYSVFAGVG
ERTREGNDLYHEMIDSGVISLKDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEE
GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSV
QAIYVPADDLTDPSPATTFSHLDATTVLSRQISELGFYPAVDPLESSSRIMDPNIVGREH
YDTASRVAETFTGTPGKLVSLKDAIKGFNMILDGELDHIPEVAFYMVGDIDEVQVKAEAL
AQELAA
Nucleotide sequence
Length: 1,523
>Harore.CG.MTP2014.S18.g10655.01.t
TAGTTTTCTTGATTTTGCTGTGATAAACAACATTATCCTCGAGTAGTTTTATTAAGTTAA
TTGAATACTTCGTTCACCATGTTGAATTCGGTTCGGAACTGTTTTCGTGCGTTGCATTAT
GGCAAATCTATCACGACCAATGGTGCTCGCGCGACTACTGCTATAAGTCAACGCAATTAC
ACCCCTGAAGCTGCGGCTGCTAAGAAAAAAGATACAGGTCAGAACACTGTTCGTACAATT
GCTATGGATTCTACCCAGCGTTTGGTCCGTGGACAAAAGTGTGTTGACACAGGCGACTCC
ATCATGGTCCCTGTTGGCCCAGCAACTCTTGGACGAATCATCAATGTCATCGGTGAGCCC
ATCGATGAACGTGGTCCGGTTGAATCCAAAAGCTACGCTTCTATTCATGCATCTCCACCC
GATTTGATTGAAACCGGAGGTGCACAAGAAATTCTCGAGACTGGTATCAAGGTTGTGGAC
GTGCTTGCCCCTTATGCTAGGGGAGGAAAAATTGGTCTTTTCGGAGGAGCAGGTGTCGGC
AAGACGGTGTTCATCATGGAACTGATGAACAACATTGCTAAGGCTCACGGAGGTTATTCA
GTTTTTGCTGGAGTCGGTGAAAGAACTAGAGAGGGCAACGACTTGTACCACGAGATGATT
GATTCTGGAGTCATTTCACTTAAAGATAAATCGTCAAAGGTCGCCCTTGTGTACGGACAA
ATGAATGAACCGCCCGGTGCCAGAGCTCGTGTTGCCTTGACCGGTCTGACCGTTGCCGAA
TACTTCCGAGATGAAGAAGGGCAGGACGTGTTGCTTTTTATTGACAACATTTTCAGATTT
ACACAAGCTGGTTCAGAGGTTTCTGCCTTGCTTGGTCGTATTCCATCTGCTGTCGGTTAC
CAGCCAACTTTAGCCACTGATATGGGTACCATGCAGGAAAGAATTACAACTACCAAAAAG
GGATCCATCACATCTGTGCAGGCTATCTATGTACCTGCTGACGATTTGACAGATCCCAGT
CCAGCAACGACCTTCTCTCACTTGGACGCTACCACTGTATTGTCGCGTCAGATTTCAGAG
TTGGGTTTCTACCCCGCTGTAGACCCTCTGGAATCGTCCTCTCGTATCATGGACCCCAAC
ATTGTTGGAAGAGAGCATTATGACACCGCTAGTAGAGTAGCGGAGACTTTCACAGGAACT
CCAGGTAAACTCGTATCATTGAAAGATGCCATTAAAGGTTTTAATATGATTCTCGATGGC
GAGTTGGATCACATACCAGAAGTCGCATTTTACATGGTCGGTGACATCGACGAGGTGCAA
GTAAAAGCTGAAGCACTCGCGCAGGAGTTGGCGGCATAGAAATTTATTTAAAATTTTGTT
TATCGGTAGTGATCTTTCTTTCCATTTTCAGCAATTACCAATATCCAATTTGATTTCCTG
CAAGAAATTTGTTCCAGAAATGTATTGAAAAAGTTCACTTTCAAACTAAGATTCGTGCTG
TTCATTTTTCAAATATAAGAAAA
| TIGRFAM |
ATP_synth_F1_bsu (IPR005722) - T[43-369] 1.3E-175 |
| SUPERFAMILY |
ATPase_F1/V1/A1_a/bsu_N_sf (IPR036121) - T[45-73] 2.17E-6 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_N (IPR004100) - T[47-72] 4.9E-5 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[77-353] 2.82E-88 |
| Pfam |
ATPase_F1/V1/A1_a/bsu_nucl-bd (IPR000194) - T[129-348] 2.4E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[141-333] 5.4E-6 |
| ProSitePatterns |
ATPase_a/bsu_AS (IPR020003) - T[339-348] . |
| Gene3D |
ATPase_F1/V1_b/a_C (IPR024034) - T[365-425] 4.4E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VATB2_HUMAN | 27.301 % | 104 | 3.32E-24 |
| VATB1_HUMAN | 26.686 % | 106 | 8.16E-25 |
| ATPB_HUMAN | 72.34 % | 610 | 0 |