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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C3.301.v1....' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S18.g08229.01.t

Possible name(s)

ATL1; ATL2; ATL3

Gene model

Harore.CG.MTP2014.S18.g08229

Location

S18 [571,590 / 576,017]

Sequences

Amino acid sequence

Length: 695

>Harore.CG.MTP2014.S18.g08229.01.p
MDIAEALYEEERNKDHSDERKLISILKTKSEGGRCKIEVDEEALKTIFEKPEVANLPIMI
LSVTGAFRKGKSFLLNFFLRYLRKKGHQTANNWLGNEDMNDGFEWKGGKQPLTQGIIVFN
EVFIISMDGQECFTEYARVVQMRKSSDKQPPFQKFMFVVRDWQELGDHDYGPDCAVADNE
KCSYLTGVLSSRSHNKELTMIRQHLRSSFVDLDCFLMPHPGMKVAVSSSKRPFHGALKDI
GKEFLDNAQLLADCLLNPKNCVPKKIHGKTIMASSLVNYAIECGKTFASGRIPEPQTMLK
TAATVMNLEALKVCTERYNEIMKTMCAEYLPDGKLNAVDQQAKRECNSLFEENTAFGDKD
ISEAFRLKFSETLQNHQLIYKKMNKAKAREIERKVREHANDEVKIFALKLEKVAKDGAIT
DKVFGEYYRKFQMEAIDLFVTQNSGKLGFKDSISILETDLRFAGDVLKRQNAEKYELEKT
RKQRVELDLLQVVQKQIEGYKSAMNKFHSTFVDWGQLAKAHNNARHTATKAYALSVTALP
GPKVQTYMDKLNSLIDKEYEDIATRNETNKKMLEMTLDQLIFMSIPKYMSIMYEGITESY
VLPEVLSSCHKETSDRFVEKLTHENDVTELCWQPEQNQIISKYCSHLRAQLNEQFEQIKS
MNEKNRGIFPKTKSAVVSFFSQVVGSKRKSNDTYF

Nucleotide sequence

Length: 2,088

>Harore.CG.MTP2014.S18.g08229.01.t
ATGGATATCGCTGAGGCTTTATATGAAGAGGAACGCAATAAAGATCACTCAGATGAGAGA
AAGTTAATTTCCATTCTGAAAACCAAGTCTGAGGGAGGAAGATGTAAAATCGAAGTCGAT
GAGGAAGCTTTGAAGACTATTTTCGAAAAACCTGAGGTAGCCAACCTCCCCATAATGATA
CTGTCTGTTACCGGGGCGTTTAGAAAGGGAAAATCCTTTCTGCTTAACTTCTTCCTTCGT
TATTTGAGAAAGAAAGGACATCAAACTGCCAACAACTGGCTTGGGAACGAAGATATGAAT
GATGGATTTGAATGGAAAGGAGGAAAACAACCTCTGACTCAAGGAATAATTGTATTCAAC
GAAGTCTTCATAATATCGATGGATGGGCAAGAGTGTTTTACTGAATACGCAAGAGTTGTA
CAAATGCGGAAATCGTCAGATAAACAACCTCCGTTTCAGAAATTCATGTTCGTTGTAAGA
GACTGGCAAGAGTTGGGTGATCACGATTACGGCCCAGATTGTGCAGTGGCCGATAATGAG
AAATGCAGTTACTTAACTGGGGTTCTGTCTAGTCGTTCACATAACAAGGAATTGACCATG
ATACGACAACATCTTCGCTCAAGTTTTGTAGATCTAGATTGCTTCCTGATGCCGCATCCG
GGCATGAAAGTTGCGGTCTCATCAAGTAAAAGACCATTTCACGGAGCACTGAAAGATATA
GGAAAAGAATTCCTAGATAACGCCCAGCTCTTGGCCGATTGTCTCCTGAACCCAAAAAAC
TGCGTTCCGAAGAAGATCCACGGTAAGACGATAATGGCAAGTTCGTTAGTCAATTACGCA
ATTGAGTGCGGCAAAACTTTTGCGAGCGGTCGTATTCCGGAACCCCAAACCATGCTCAAG
ACGGCTGCTACAGTCATGAATTTGGAAGCGCTCAAAGTATGTACTGAAAGATACAATGAA
ATCATGAAAACGATGTGCGCAGAATACTTGCCAGATGGAAAGTTAAACGCAGTTGATCAG
CAAGCCAAGCGCGAATGCAATTCGTTATTCGAAGAAAACACTGCATTTGGCGACAAAGAT
ATAAGCGAAGCATTTCGTTTGAAATTCAGCGAAACTCTCCAAAATCATCAATTAATATAT
AAGAAAATGAACAAGGCAAAGGCACGGGAAATCGAGCGAAAAGTCAGAGAGCACGCCAAC
GATGAAGTAAAAATATTTGCTCTGAAATTGGAAAAGGTGGCCAAAGATGGTGCCATAACG
GACAAAGTCTTCGGCGAATATTATAGAAAATTTCAAATGGAAGCGATCGACCTTTTCGTC
ACGCAAAACAGTGGAAAATTAGGATTCAAGGATTCGATCAGCATACTGGAAACGGATTTG
CGGTTCGCAGGCGACGTTCTGAAAAGGCAAAACGCGGAGAAATATGAACTGGAAAAAACT
AGAAAACAACGCGTGGAGTTAGACTTGCTACAAGTCGTACAGAAGCAAATTGAAGGCTAC
AAGTCGGCTATGAACAAATTCCATTCTACATTCGTGGATTGGGGCCAACTTGCAAAAGCG
CACAACAACGCCAGACATACTGCAACCAAAGCGTACGCTCTTAGCGTAACTGCGCTTCCA
GGACCAAAGGTTCAGACCTACATGGACAAGCTGAATTCGTTGATAGACAAGGAATACGAG
GACATAGCTACGAGAAATGAGACCAATAAGAAAATGCTTGAAATGACTTTGGACCAGCTG
ATCTTCATGAGCATTCCGAAGTACATGAGTATCATGTATGAGGGCATCACAGAGAGTTAC
GTTCTCCCAGAAGTGCTGAGCTCATGCCACAAGGAGACAAGCGATCGATTCGTTGAAAAA
TTAACCCATGAGAACGACGTGACCGAATTGTGCTGGCAGCCAGAGCAGAATCAAATAATT
TCAAAATATTGCAGCCACCTGAGGGCACAGTTGAATGAGCAATTTGAACAAATCAAATCA
ATGAACGAAAAAAATCGTGGCATTTTCCCGAAAACGAAATCTGCAGTTGTAAGTTTTTTC
AGCCAAGTTGTAGGTAGTAAAAGGAAATCCAATGATACTTATTTTTGA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[35-239] 9.56E-7
Pfam
Guanylate-bd_N (IPR015894) - T[36-122] 1.4E-13 - T[132-260] 2.9E-12
ProSiteProfiles
G_GB1_RHD3_dom (IPR030386) - T[55-116] 9.513
SUPERFAMILY
Guanylate-bd_C_sf (IPR036543) - T[268-402] 3.01E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATLA2_HUMAN 33.43 % 176 2.46E-47
ATLA1_HUMAN 30.445 % 177 6.56E-48
ATLA3_HUMAN 30.318 % 171 5.87E-46