- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S18.g02500.01.t
Possible name(s)
CSE1L; IPO7; IPO8
Gene model
Location
S18 [240,158 / 249,059]
Amino acid sequence
Length: 1,056
>Harore.CG.MTP2014.S18.g02500.01.p
MDPAKLVVVLEGTINPTLRKDAESKLEEMHKVAGFSPLLLRIIMSEEIQMAVRQAGAIYM
KNMCVNWWHERTDKDGTPVTDIFHIHENDRQVIRQNIVEAIILAPDIIRNQMTVVVNHII
KYDYPERWPGIVDKISSNLQAENSNALLGALLTLYQLVKNYEYKKPEERVPLLVAMKVFL
PALALLFERLIEDNSAASIIIQKQFLKILYALVQYSLPMELFDQATLDNWMKFVQIIVER
PPPPETLQVDELERQELPWWKIKKWALHILARIFERYGSPGTVSKEYVEFAEFFLKRYAG
GITHVLLKLLDGYRNKEYVSPRVLQQALHFLEQGVSHAFTWKIMKDVYLDLLKDIIFPLM
CFTEEDKEMWSDDPHEYIRMKFDVFEDFLSPTSAAQCLLQAACTKRKQVLQKTMEFCHNV
LMENGANRDARRKDGAMHIIGSLATTLLKRKMYKDQLEPMLMTHVVPEYKSDQGFMRARA
AWVSQHFSEVRFRKDNNLFVVSDGIKSLLVEDRELPVRVEAAIALQTLLCEQEKAEKHCE
QHIRIIMQNLLQLVHETENDDLTSVVQKVICLYCEQVIPYAVEITQNLVMTFLKMLSEDD
DRQEPADEDDETSDDKAVAAMGILNTIETVLDMMEEEREITVQLEGIVTPAIAHVLKTRK
MDYYEDIFSLMYSLTCQAISPQMWAALPLIQEVFQVDGFDYFTEMMPVLHNFCTIDTETF
LSNPKYMEVIYSMCKKILENDAGEDPECHAAKLLEVIILQCRGRIDQVIPLFVEVALARL
TREVKTSELRTMCLQVVIASIYYNCNLLLSTLENMRFPNTTESISDSFFRQWIKDIDCFL
GIHDRRVAALGLCALMDAPNKPSAIMELTPQILPSLIILFQGLTKAYRTRGDGDSSSGSD
SEEEDAEDDYEQQELGSSEDEIDEESAEYLEMLEKKPITNGDGDGDSDEEDDEGETSLEI
YASSLEAENNQIDEYNIFKHVLSSMESRDPTWYAQLVSGLTDDQRKALHEIYMLADQRLA
AAESKKIEKTGGYQFNTTNVPTNFNFSSGPPASLSP
Nucleotide sequence
Length: 4,009
>Harore.CG.MTP2014.S18.g02500.01.t
CGGAAATCGAGCGCATGCGCACATTTCGCGGTTTTCTATTCCAGTTACTCTAGTGTTTTG
TTCAGCAATTTGCCAAGTGAGCTGAGTTCATGTAAAAACACATGTGCTATTCAAGGAAGA
AATATATCGAATCTTCGGTAGTGACATTAGAAGTAGCCTGATAACGTATTTTATCCGTCA
TAATTCACATGGATCCGGCAAAGCTTGTTGTTGTCCTGGAAGGAACGATCAATCCAACTT
TACGTAAAGATGCGGAAAGCAAACTAGAGGAGATGCACAAAGTTGCAGGATTCTCACCCC
TGCTGCTGCGCATCATTATGTCCGAGGAAATTCAGATGGCTGTACGTCAAGCCGGAGCGA
TCTACATGAAAAACATGTGTGTTAATTGGTGGCATGAAAGAACGGACAAGGACGGGACCC
CAGTCACTGACATATTTCACATCCATGAAAACGACAGACAAGTCATTAGACAGAATATCG
TCGAAGCCATAATACTCGCTCCCGATATCATCAGGAATCAGATGACCGTCGTGGTCAATC
ACATTATAAAGTATGATTATCCCGAACGATGGCCAGGCATTGTTGACAAAATATCCTCCA
ATCTCCAAGCAGAAAACTCCAATGCATTGTTGGGTGCTTTATTAACGCTCTATCAACTTG
TGAAGAATTATGAATACAAGAAGCCAGAAGAGAGGGTGCCCTTATTGGTTGCCATGAAGG
TCTTCCTGCCTGCTCTTGCCCTGTTATTCGAAAGATTGATCGAGGATAATTCTGCTGCGT
CCATCATAATTCAGAAACAGTTTTTAAAAATCCTCTATGCTCTAGTTCAGTATTCTCTGC
CGATGGAATTGTTTGACCAAGCAACGTTGGACAACTGGATGAAGTTCGTTCAAATCATTG
TCGAACGACCCCCGCCTCCAGAAACTCTTCAGGTTGATGAATTAGAGAGACAAGAACTGC
CATGGTGGAAGATAAAGAAATGGGCACTTCACATACTTGCCCGTATATTTGAAAGATATG
GGAGTCCTGGTACTGTCAGTAAGGAGTATGTTGAATTTGCTGAATTCTTTCTCAAAAGAT
ATGCAGGTGGTATCACACACGTTCTCCTGAAATTGCTGGACGGTTATCGCAACAAGGAAT
ATGTTTCCCCACGCGTTCTCCAGCAGGCATTGCATTTTCTCGAACAAGGTGTCAGTCATG
CCTTCACTTGGAAGATTATGAAGGACGTTTACTTGGATCTCCTTAAGGACATCATCTTCC
CACTGATGTGTTTCACAGAAGAGGATAAAGAGATGTGGAGCGACGATCCCCACGAATACA
TCCGCATGAAATTCGATGTCTTCGAAGACTTCTTATCCCCAACGAGTGCAGCTCAGTGTC
TTCTGCAAGCAGCATGCACAAAAAGAAAGCAAGTGTTGCAGAAAACAATGGAATTTTGTC
ATAATGTACTGATGGAAAACGGCGCAAATCGCGACGCCCGAAGAAAAGATGGAGCCATGC
ACATCATTGGTTCTCTTGCGACAACGCTTCTCAAGAGAAAAATGTACAAAGACCAACTCG
AGCCCATGCTAATGACTCACGTCGTACCAGAGTACAAAAGCGATCAAGGTTTCATGAGGG
CACGGGCTGCCTGGGTTAGTCAGCATTTCAGCGAAGTTCGTTTCCGAAAAGACAACAATC
TCTTTGTTGTGAGCGACGGCATAAAATCACTTCTGGTCGAGGACAGAGAGCTTCCAGTTC
GCGTGGAAGCAGCAATCGCCCTCCAGACTTTGCTCTGCGAGCAGGAGAAAGCCGAAAAGC
ATTGCGAGCAGCATATAAGGATCATTATGCAAAATCTTCTACAATTAGTGCACGAAACAG
AGAATGACGATTTGACTTCAGTGGTACAAAAAGTAATCTGCTTGTATTGCGAACAAGTGA
TACCTTATGCCGTCGAAATCACACAAAATTTGGTTATGACTTTCTTGAAAATGCTGTCAG
AAGATGATGACAGGCAGGAGCCTGCAGACGAGGATGATGAGACAAGCGACGACAAGGCTG
TCGCAGCGATGGGCATACTTAACACCATCGAAACCGTACTGGATATGATGGAAGAAGAAC
GCGAAATCACAGTTCAGTTGGAAGGCATAGTAACACCTGCAATTGCCCATGTACTTAAAA
CTAGAAAGATGGATTATTACGAAGATATATTCTCTCTTATGTATTCTCTAACTTGTCAAG
CAATATCACCTCAAATGTGGGCAGCTCTTCCCCTCATACAAGAAGTATTTCAGGTTGACG
GTTTCGACTACTTTACCGAAATGATGCCTGTTCTGCACAACTTTTGTACTATCGACACCG
AAACTTTCTTGTCAAATCCGAAATATATGGAAGTAATTTACTCGATGTGCAAAAAAATCC
TAGAAAATGATGCTGGAGAAGATCCAGAGTGTCATGCTGCCAAATTGTTAGAAGTTATTA
TTCTGCAATGTCGGGGCCGCATCGATCAGGTGATACCACTGTTTGTTGAGGTGGCTTTAG
CTCGTCTCACCAGGGAAGTTAAAACGAGTGAACTTCGAACTATGTGTCTGCAAGTGGTAA
TTGCTTCTATATACTACAACTGTAATCTACTGTTGTCAACTCTGGAGAACATGAGGTTTC
CCAACACTACCGAGTCAATCTCAGATTCATTTTTTAGGCAGTGGATCAAGGACATCGACT
GTTTCTTGGGAATACATGACAGGCGTGTGGCCGCTCTGGGGCTTTGTGCCCTAATGGATG
CTCCGAACAAGCCCAGTGCCATTATGGAACTCACGCCGCAGATACTACCATCTCTAATCA
TATTATTCCAAGGTCTAACAAAAGCATATAGGACTAGGGGAGATGGAGACAGCAGCAGTG
GGTCCGACTCGGAAGAGGAAGACGCAGAGGATGATTACGAACAGCAAGAGCTTGGTTCGA
GCGAAGATGAAATCGATGAAGAATCTGCTGAATATTTAGAGATGTTAGAGAAAAAGCCCA
TAACAAATGGAGATGGAGATGGTGACAGCGACGAGGAAGATGACGAGGGTGAAACTTCGT
TGGAAATATATGCTTCTTCTTTGGAAGCAGAAAACAATCAAATCGATGAATATAACATAT
TTAAACATGTTTTGAGCAGTATGGAATCCAGAGACCCAACCTGGTATGCGCAACTGGTTT
CGGGCTTAACCGATGATCAAAGAAAAGCCCTACATGAAATATACATGCTGGCAGATCAGA
GGCTTGCAGCTGCGGAATCCAAAAAGATTGAAAAAACTGGAGGATATCAATTTAACACAA
CAAACGTTCCAACAAATTTCAACTTCTCTTCTGGGCCCCCTGCAAGTCTATCACCGTGAT
TACCCATTACCTTAATGGTTGGATAGTTTGCGTACAGTAGGGACAAGTTAGTAGTTATAA
GTATGTTAGTGATTCATCTACTCTCCGAGCAACTCAAATGTTAGGCCTGCGAAGGTGCTT
GTCTTCTCCCAGTTCTGTATAATTCAATGCTGTACTGAATAGTTTTGTTGAGTTAAATTT
GTTTGAATTGTAAAGACAATAAAATTTCCAAGCAGATTGTTTCTCAATTTTCCTATTTAT
CATCGATCTTTATAAAATTATATTCCTAGTTAACTTAGTTGGCACTTTACATTTAAATTA
AAGTTTGTTCATGGTTGCTGATTCGGTTGTAATTTATTTCACCTTGGTCAGACATCAATT
TTTTGTTTGTATGATACTTGGATGAGGCATCTATATTAAACATGACCTGCCTGTAGTGGG
TAGACGGCTTTGTCGTGTGAAAAGGTGTTATCCGTGGTTTCAAATCATACGTTTGTAGTA
CTGGCTTTTATATAGAAATGATTGTATCTAGGAAATGTTTTGTATTGTTGAAGTATTGGA
GATACTTTTTCCGAAGGCTTGAACTCATTTCTTGAGTTATGTAGCTACGCAATAGAATTA
TGGAAGAGGCTAGATATTTGGTCGTCATTATAACTGAATTTTATGAGCA
| Gene3D |
ARM-like (IPR011989) - T[2-1013] 1.8E-205 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[4-908] 5.76E-130 - T[945-1012] 5.76E-130 |
| SMART |
Importin-beta_N (IPR001494) - T[22-103] 2.1E-8 |
| Pfam |
Importin-beta_N (IPR001494) - T[22-101] 1.1E-14 |
| ProSiteProfiles |
Importin-beta_N (IPR001494) - T[22-103] 17.333 |
| Pfam |
Cse1 (IPR013713) - T[322-445] 1.9E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IPO7_HUMAN | 56.682 % | 1187 | 0 |
| IPO8_HUMAN | 50.236 % | 1063 | 0 |
