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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S186.g05131.01.t

Possible name(s)

AC099850.2; SMG8

Location

S186 [7 / 3,340]

Sequences

Amino acid sequence

Length: 739

>Harore.CG.MTP2014.S186.g05131.01.p
MEDYMDEEEERKEEMKDAGNSIRAFLFQHTSLALDKKGFNDSIGRNPLPSHFELPTLKNW
IKAGLFVLVANGLYHLLLTDGPGLGVDFEGDSLNKKVEGGRPLEDMFEKVVNYRQYLRSK
IDVEMKYSEARCSKILPMAIAVYQNSLPSHYTSKVHNNQLNQALRTYNHHARGPATEKYR
NKLQEECIAFWSSGRQLCEVRSLTDRHCVHRFHILAPLNGPQDPDANPPVLFHSSRSRST
ATSSCGTVQGLRDDPFDLKEANYEFYVQLDKKSTMQPVEVYAFPVYQPGDEARNTQAAYY
TDVSSSFPSQILSGDNQYYHTSSTGAHRNSDSVTTQEEDQGNKAKNRSRHTSEGLLESAA
EDIDHAGSTQGSMENTEKATEQASSQELSQNNICESISSTSPRKLPSPTKEQRVSESDGG
KTGKEVQGTSSIHMNFALSFGGQSDGSGQVQSPTDNASQREEIIMENIDQQLGYQKNGNT
EIESEEEKRFIDGMIHSNCPKGVLPLYPSWSLVKLGSYSYYASVRGLETPGFLPGTNFLV
PWDVPVDKAKDDSAQWPVPGEIQPSKKITIQPSKSVPGRKNRDDRATVRAFIGYEYETLR
GQRFICSGPDKPVKVTSSGMVKDSCHKLLENDMPLYTPSPASGRGGKVLLGQLMRVYIVI
PPEASLEITLNPQIVPGPSPSTPTFSTGVPELTLSTDAVWVLRLPYVYVSELGLHHIPKE
QEILQTCKVVKGMIKLLKK

Nucleotide sequence

Length: 2,220

>Harore.CG.MTP2014.S186.g05131.01.t
ATGGAAGACTACATGGATGAAGAAGAGGAGAGAAAAGAAGAAATGAAAGATGCTGGAAAT
TCAATAAGAGCATTTTTATTTCAACACACTTCACTTGCGTTGGATAAAAAAGGTTTCAAT
GATAGCATCGGGAGGAATCCACTACCTTCACATTTTGAGTTGCCTACATTGAAGAATTGG
ATAAAGGCAGGATTGTTTGTTTTGGTTGCAAATGGACTTTATCACTTGCTACTGACGGAC
GGTCCGGGTCTTGGCGTGGATTTTGAAGGAGATAGTCTGAACAAGAAGGTGGAAGGTGGA
CGACCGTTGGAAGACATGTTTGAAAAAGTTGTCAATTACAGACAATACTTGAGATCAAAA
ATCGATGTAGAAATGAAATATAGTGAAGCGAGGTGCAGCAAAATTCTTCCCATGGCTATT
GCAGTTTATCAGAATAGTTTGCCTTCTCATTACACCAGCAAAGTTCATAATAACCAGCTC
AATCAGGCACTTCGTACTTATAACCATCATGCTCGTGGTCCAGCTACGGAAAAGTATCGA
AATAAACTACAAGAAGAATGCATTGCTTTCTGGAGCAGTGGCAGGCAGCTATGCGAAGTT
CGTTCTCTCACGGATAGACACTGCGTCCATCGTTTCCACATTTTAGCCCCGCTGAACGGA
CCCCAAGATCCTGACGCCAATCCTCCTGTGCTTTTTCATTCATCAAGATCCAGGTCAACA
GCCACTAGCAGTTGTGGCACTGTGCAGGGTCTCCGTGACGACCCATTCGATTTGAAAGAA
GCAAACTACGAATTCTATGTACAACTGGATAAGAAATCCACAATGCAGCCTGTCGAAGTC
TACGCTTTCCCGGTTTATCAACCTGGAGATGAGGCAAGGAACACGCAGGCAGCTTACTAT
ACGGATGTTTCTTCGTCATTTCCCTCCCAAATACTCTCGGGAGACAATCAATATTATCAC
ACAAGTTCGACGGGCGCTCATCGTAATTCCGACAGCGTTACGACGCAAGAAGAGGACCAA
GGAAATAAGGCCAAAAACAGAAGCCGTCATACATCCGAGGGACTTCTCGAAAGCGCTGCA
GAAGATATCGATCATGCTGGTTCTACTCAAGGAAGCATGGAAAATACAGAAAAAGCGACT
GAGCAGGCAAGCAGCCAAGAACTTTCTCAAAACAACATTTGCGAAAGCATATCATCGACT
TCGCCCCGTAAGCTTCCCTCCCCGACAAAAGAACAACGTGTGTCTGAGAGCGACGGTGGA
AAAACTGGTAAGGAAGTGCAAGGGACCTCTTCAATCCATATGAATTTTGCCTTGAGTTTT
GGCGGGCAGTCCGATGGCAGCGGACAGGTACAGAGTCCGACGGACAATGCGAGTCAGAGA
GAAGAGATCATCATGGAAAATATCGATCAGCAGCTGGGATATCAGAAGAACGGAAACACA
GAAATAGAGTCCGAAGAAGAGAAGAGATTTATAGACGGGATGATACATAGTAATTGTCCC
AAAGGGGTTTTACCATTATATCCTTCATGGAGTTTGGTAAAACTCGGATCATATTCATAT
TACGCATCCGTAAGAGGTTTGGAGACTCCTGGATTCTTACCGGGAACAAATTTCCTGGTT
CCGTGGGACGTCCCGGTCGATAAGGCCAAAGATGACAGCGCTCAGTGGCCTGTGCCTGGA
GAAATTCAACCCAGCAAGAAAATAACAATTCAGCCATCGAAGAGCGTCCCCGGCAGAAAA
AACCGTGATGACCGTGCTACAGTCCGTGCTTTCATCGGTTATGAATACGAGACCCTGCGA
GGACAGAGATTCATTTGTTCTGGTCCGGACAAGCCGGTAAAAGTTACCAGTAGCGGAATG
GTCAAGGATTCATGTCACAAGCTACTCGAGAACGATATGCCCCTGTACACCCCTAGCCCC
GCGTCTGGCAGGGGTGGCAAAGTTCTTCTCGGACAACTGATGAGAGTTTACATCGTGATC
CCGCCCGAAGCGAGTCTCGAAATCACCTTGAATCCACAGATAGTGCCAGGACCAAGCCCA
AGTACTCCTACTTTTTCGACCGGCGTTCCGGAACTGACACTGAGTACCGATGCGGTGTGG
GTTTTGCGGTTACCCTACGTGTATGTGAGTGAACTGGGTCTTCACCATATTCCAAAAGAG
CAGGAAATCTTGCAGACTTGTAAAGTGGTCAAAGGGATGATTAAACTTTTGAAAAAATGA

InterProScan

PANTHER
SMG8 (IPR028802) - T[8-738] 2.6E-158
Pfam
Smg8/Smg9 (IPR019354) - T[9-733] 5.2E-158

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMG8_HUMAN 48.134 % 257 1.15E-73