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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S185.g13022.02.t

Possible name(s)

ARHGAP1; ARHGAP8; PRR5-ARHGAP8

Location

S185 [3,306 / 7,111]

Sequences

Amino acid sequence

Length: 448

>Harore.CG.MTP2014.S185.g13022.02.p
MGICCSKCTARVDPTSSQAGRYSSSRNYVQPPGFKISVLYFSELAKLPAPQSIAGGDNLS
RPTTAWSDVSAEFADIAQYGIVEVSGVDLSGRPVIIFSSCMLPSNKVLDHDKLLRYLKHT
LDKYVESDYSFVYLHHGLNSENKPSFSWLLKAYKEFDRKYKKNVKAMYVVHPTGVIRLLM
NLMKPALSIKFGRKLRYVNYINEMSENIPVSQLNIPPQVLRHDQEMVSKSRTQQLLLRNQ
DVADSGKSVEPVRTKQFGVSLKFLQENNPGYSIPKVMQECIEYLSANAGLNTEGLFRRSP
SALALKDVQNQYNNGQQVTFTDPHLAAAILKAFLRQLPEPLLTYQLYEFILNIAYVEEDT
RIRVITTLLQKLPTENLTALKSLVQFLAKVASQSHVNRMDESNLAVVFGPNLVWSTEVAS
LVAMGPINMFTNLLIVHHHELFSDDSDC

Nucleotide sequence

Length: 1,347

>Harore.CG.MTP2014.S185.g13022.02.t
ATGGGAATATGTTGCAGCAAGTGTACAGCCAGAGTCGATCCCACGTCCTCCCAAGCGGGT
AGGTATTCCAGTTCCCGGAATTATGTGCAACCTCCAGGGTTCAAAATTTCTGTTCTCTAT
TTTTCAGAACTTGCCAAACTTCCTGCACCACAAAGCATTGCGGGTGGAGATAACCTATCC
CGTCCAACAACAGCTTGGTCAGATGTCAGTGCCGAATTCGCAGACATTGCACAGTATGGA
ATCGTAGAGGTTTCAGGAGTGGACTTGTCAGGGCGCCCAGTCATCATATTCAGTTCTTGC
ATGCTACCATCAAATAAGGTGTTGGACCATGACAAATTGCTAAGATATTTGAAGCACACG
CTGGATAAATATGTAGAGTCGGACTACAGTTTTGTGTATTTACACCATGGTCTTAACAGT
GAAAACAAGCCGTCATTTTCATGGTTACTGAAGGCATACAAGGAATTTGACAGAAAGTAT
AAAAAGAATGTGAAAGCCATGTATGTCGTGCACCCGACAGGCGTCATCCGTTTATTAATG
AATTTAATGAAGCCCGCTCTGAGCATTAAATTCGGCAGAAAACTCAGATACGTCAACTAC
ATAAATGAGATGTCAGAAAATATCCCGGTTTCTCAACTTAATATTCCTCCACAAGTGTTA
AGACATGACCAGGAGATGGTGAGTAAATCTCGAACGCAACAATTACTTCTAAGAAATCAA
GATGTAGCGGACAGCGGAAAATCGGTTGAACCCGTACGAACGAAGCAGTTTGGTGTGTCT
CTTAAATTCCTTCAAGAAAATAACCCTGGGTACAGCATCCCAAAGGTAATGCAAGAATGT
ATAGAATATCTCTCTGCAAATGCAGGTTTAAATACCGAAGGGTTGTTTCGTCGATCACCA
TCAGCACTTGCTCTTAAAGATGTTCAAAATCAGTATAACAACGGTCAACAAGTCACATTT
ACGGATCCGCATTTGGCTGCTGCGATCCTGAAAGCATTTTTACGGCAACTACCAGAACCA
TTGCTTACATACCAGTTGTATGAGTTCATCCTTAACATAGCATATGTGGAAGAAGATACT
AGAATTCGTGTTATTACAACGCTACTGCAAAAGCTACCAACTGAAAACTTAACAGCTTTG
AAATCATTAGTGCAATTTCTTGCCAAGGTGGCGAGTCAAAGTCACGTTAATCGAATGGAC
GAGAGTAATCTCGCTGTTGTATTTGGTCCAAACCTGGTCTGGTCAACTGAGGTTGCATCC
CTAGTAGCAATGGGACCTATCAACATGTTCACCAATCTGTTAATTGTTCATCATCACGAA
CTGTTCAGCGATGATAGCGATTGTTAG

InterProScan

ProSiteProfiles
CRAL-TRIO_dom (IPR001251) - T[72-227] 12.646
SUPERFAMILY
CRAL-TRIO_dom_sf (IPR036865) - T[72-213] 6.28E-22
SMART
CRAL-TRIO_dom (IPR001251) - T[72-224] 2.7E-18
Gene3D
CRAL-TRIO_dom_sf (IPR036865) - T[75-228] 2.3E-43
CDD
CRAL-TRIO_dom (IPR001251) - T[79-213] 6.94224E-24
Pfam
CRAL-TRIO_dom (IPR001251) - T[91-225] 1.5E-39
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[250-442] 1.8E-56
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[253-442] 2.94E-49
ProSiteProfiles
RhoGAP_dom (IPR000198) - T[259-442] 40.623
SMART
RhoGAP_dom (IPR000198) - T[271-439] 2.4E-52
Pfam
RhoGAP_dom (IPR000198) - T[274-416] 1.3E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BGIN_HUMAN 37.349 % 109 1.32E-25
RHG01_HUMAN 48.953 % 361 1.34E-121
RHG08_HUMAN 44.878 % 338 1.41E-112