- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S185.g13022.02.t
Possible name(s)
ARHGAP1; ARHGAP8; PRR5-ARHGAP8
Gene model
Location
S185 [3,306 / 7,111]
Amino acid sequence
Length: 448
>Harore.CG.MTP2014.S185.g13022.02.p
MGICCSKCTARVDPTSSQAGRYSSSRNYVQPPGFKISVLYFSELAKLPAPQSIAGGDNLS
RPTTAWSDVSAEFADIAQYGIVEVSGVDLSGRPVIIFSSCMLPSNKVLDHDKLLRYLKHT
LDKYVESDYSFVYLHHGLNSENKPSFSWLLKAYKEFDRKYKKNVKAMYVVHPTGVIRLLM
NLMKPALSIKFGRKLRYVNYINEMSENIPVSQLNIPPQVLRHDQEMVSKSRTQQLLLRNQ
DVADSGKSVEPVRTKQFGVSLKFLQENNPGYSIPKVMQECIEYLSANAGLNTEGLFRRSP
SALALKDVQNQYNNGQQVTFTDPHLAAAILKAFLRQLPEPLLTYQLYEFILNIAYVEEDT
RIRVITTLLQKLPTENLTALKSLVQFLAKVASQSHVNRMDESNLAVVFGPNLVWSTEVAS
LVAMGPINMFTNLLIVHHHELFSDDSDC
Nucleotide sequence
Length: 1,347
>Harore.CG.MTP2014.S185.g13022.02.t
ATGGGAATATGTTGCAGCAAGTGTACAGCCAGAGTCGATCCCACGTCCTCCCAAGCGGGT
AGGTATTCCAGTTCCCGGAATTATGTGCAACCTCCAGGGTTCAAAATTTCTGTTCTCTAT
TTTTCAGAACTTGCCAAACTTCCTGCACCACAAAGCATTGCGGGTGGAGATAACCTATCC
CGTCCAACAACAGCTTGGTCAGATGTCAGTGCCGAATTCGCAGACATTGCACAGTATGGA
ATCGTAGAGGTTTCAGGAGTGGACTTGTCAGGGCGCCCAGTCATCATATTCAGTTCTTGC
ATGCTACCATCAAATAAGGTGTTGGACCATGACAAATTGCTAAGATATTTGAAGCACACG
CTGGATAAATATGTAGAGTCGGACTACAGTTTTGTGTATTTACACCATGGTCTTAACAGT
GAAAACAAGCCGTCATTTTCATGGTTACTGAAGGCATACAAGGAATTTGACAGAAAGTAT
AAAAAGAATGTGAAAGCCATGTATGTCGTGCACCCGACAGGCGTCATCCGTTTATTAATG
AATTTAATGAAGCCCGCTCTGAGCATTAAATTCGGCAGAAAACTCAGATACGTCAACTAC
ATAAATGAGATGTCAGAAAATATCCCGGTTTCTCAACTTAATATTCCTCCACAAGTGTTA
AGACATGACCAGGAGATGGTGAGTAAATCTCGAACGCAACAATTACTTCTAAGAAATCAA
GATGTAGCGGACAGCGGAAAATCGGTTGAACCCGTACGAACGAAGCAGTTTGGTGTGTCT
CTTAAATTCCTTCAAGAAAATAACCCTGGGTACAGCATCCCAAAGGTAATGCAAGAATGT
ATAGAATATCTCTCTGCAAATGCAGGTTTAAATACCGAAGGGTTGTTTCGTCGATCACCA
TCAGCACTTGCTCTTAAAGATGTTCAAAATCAGTATAACAACGGTCAACAAGTCACATTT
ACGGATCCGCATTTGGCTGCTGCGATCCTGAAAGCATTTTTACGGCAACTACCAGAACCA
TTGCTTACATACCAGTTGTATGAGTTCATCCTTAACATAGCATATGTGGAAGAAGATACT
AGAATTCGTGTTATTACAACGCTACTGCAAAAGCTACCAACTGAAAACTTAACAGCTTTG
AAATCATTAGTGCAATTTCTTGCCAAGGTGGCGAGTCAAAGTCACGTTAATCGAATGGAC
GAGAGTAATCTCGCTGTTGTATTTGGTCCAAACCTGGTCTGGTCAACTGAGGTTGCATCC
CTAGTAGCAATGGGACCTATCAACATGTTCACCAATCTGTTAATTGTTCATCATCACGAA
CTGTTCAGCGATGATAGCGATTGTTAG
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[72-227] 12.646 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[72-213] 6.28E-22 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[72-224] 2.7E-18 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[75-228] 2.3E-43 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[79-213] 6.94224E-24 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[91-225] 1.5E-39 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[250-442] 1.8E-56 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[253-442] 2.94E-49 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[259-442] 40.623 |
| SMART |
RhoGAP_dom (IPR000198) - T[271-439] 2.4E-52 |
| Pfam |
RhoGAP_dom (IPR000198) - T[274-416] 1.3E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BGIN_HUMAN | 37.349 % | 109 | 1.32E-25 |
| RHG01_HUMAN | 48.953 % | 361 | 1.34E-121 |
| RHG08_HUMAN | 44.878 % | 338 | 1.41E-112 |