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TRANSCRIPT CARD

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  1. Clone 'cien42731'
  2. EST 'AHC0AAA225YO05_RM1'
  3. EST 'AHC0AAA220YH02_RM1'
  4. Transcript 'KH2012:KH.C3.86.v2.A...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S185.g13022.01.t

Possible name(s)

ARHGAP1; ARHGAP8; PRR5-ARHGAP8

Location

S185 [3,306 / 9,498]

Sequences

Amino acid sequence

Length: 461

>Harore.CG.MTP2014.S185.g13022.01.p
MDECLVDLSPDGGTDVLVDEPDSKLEFLPSEEPNFGSADGNDEEQTTEELELEAEKELAK
LPAPQSIAGGDNLSRPTTAWSDVSAEFADIAQYGIVEVSGVDLSGRPVIIFSSCMLPSNK
VLDHDKLLRYLKHTLDKYVESDYSFVYLHHGLNSENKPSFSWLLKAYKEFDRKYKKNVKA
MYVVHPTGVIRLLMNLMKPALSIKFGRKLRYVNYINEMSENIPVSQLNIPPQVLRHDQEM
VSKSRTQQLLLRNQDVADSGKSVEPVRTKQFGVSLKFLQENNPGYSIPKVMQECIEYLSA
NGLNTEGLFRRSPSALALKDVQNQYNNGQQVTFTDPHLAAAILKAFLRQLPEPLLTYQLY
EFILNIAYVEEDTRIRVITTLLQKLPTENLTALKSLVQFLAKVASQSHVNRMDESNLAVV
FGPNLVWSTEVASLVAMGPINMFTNLLIVHHHELFSDDSDC

Nucleotide sequence

Length: 1,386

>Harore.CG.MTP2014.S185.g13022.01.t
ATGGATGAATGTTTAGTTGACCTTTCACCTGACGGAGGAACTGATGTACTGGTTGATGAG
CCTGATTCCAAACTCGAGTTTTTACCAAGTGAAGAACCGAATTTCGGCTCTGCCGATGGC
AATGATGAGGAGCAAACTACTGAAGAACTGGAGCTTGAAGCTGAAAAAGAACTTGCCAAA
CTTCCTGCACCACAAAGCATTGCGGGTGGAGATAACCTATCCCGTCCAACAACAGCTTGG
TCAGATGTCAGTGCCGAATTCGCAGACATTGCACAGTATGGAATCGTAGAGGTTTCAGGA
GTGGACTTGTCAGGGCGCCCAGTCATCATATTCAGTTCTTGCATGCTACCATCAAATAAG
GTGTTGGACCATGACAAATTGCTAAGATATTTGAAGCACACGCTGGATAAATATGTAGAG
TCGGACTACAGTTTTGTGTATTTACACCATGGTCTTAACAGTGAAAACAAGCCGTCATTT
TCATGGTTACTGAAGGCATACAAGGAATTTGACAGAAAGTATAAAAAGAATGTGAAAGCC
ATGTATGTCGTGCACCCGACAGGCGTCATCCGTTTATTAATGAATTTAATGAAGCCCGCT
CTGAGCATTAAATTCGGCAGAAAACTCAGATACGTCAACTACATAAATGAGATGTCAGAA
AATATCCCGGTTTCTCAACTTAATATTCCTCCACAAGTGTTAAGACATGACCAGGAGATG
GTGAGTAAATCTCGAACGCAACAATTACTTCTAAGAAATCAAGATGTAGCGGACAGCGGA
AAATCGGTTGAACCCGTACGAACGAAGCAGTTTGGTGTGTCTCTTAAATTCCTTCAAGAA
AATAACCCTGGGTACAGCATCCCAAAGGTAATGCAAGAATGTATAGAATATCTCTCTGCA
AATGGTTTAAATACCGAAGGGTTGTTTCGTCGATCACCATCAGCACTTGCTCTTAAAGAT
GTTCAAAATCAGTATAACAACGGTCAACAAGTCACATTTACGGATCCGCATTTGGCTGCT
GCGATCCTGAAAGCATTTTTACGGCAACTACCAGAACCATTGCTTACATACCAGTTGTAT
GAGTTCATCCTTAACATAGCATATGTGGAAGAAGATACTAGAATTCGTGTTATTACAACG
CTACTGCAAAAGCTACCAACTGAAAACTTAACAGCTTTGAAATCATTAGTGCAATTTCTT
GCCAAGGTGGCGAGTCAAAGTCACGTTAATCGAATGGACGAGAGTAATCTCGCTGTTGTA
TTTGGTCCAAACCTGGTCTGGTCAACTGAGGTTGCATCCCTAGTAGCAATGGGACCTATC
AACATGTTCACCAATCTGTTAATTGTTCATCATCACGAACTGTTCAGCGATGATAGCGAT
TGTTAG

InterProScan

ProSiteProfiles
CRAL-TRIO_dom (IPR001251) - T[86-241] 12.646
SUPERFAMILY
CRAL-TRIO_dom_sf (IPR036865) - T[86-227] 6.67E-22
SMART
CRAL-TRIO_dom (IPR001251) - T[86-238] 2.7E-18
Gene3D
CRAL-TRIO_dom_sf (IPR036865) - T[89-242] 2.5E-43
CDD
CRAL-TRIO_dom (IPR001251) - T[93-227] 7.71647E-24
Pfam
CRAL-TRIO_dom (IPR001251) - T[105-239] 1.6E-39
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[264-455] 7.0E-58
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[267-455] 7.46E-51
ProSiteProfiles
RhoGAP_dom (IPR000198) - T[273-455] 40.817
SMART
RhoGAP_dom (IPR000198) - T[285-452] 1.1E-53
Pfam
RhoGAP_dom (IPR000198) - T[288-429] 6.4E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BGIN_HUMAN 37.576 % 114 4.58E-27
RHG01_HUMAN 48.819 % 364 1.28E-122
RHG08_HUMAN 44.988 % 344 1.11E-114