- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S185.g13022.01.t
Possible name(s)
ARHGAP1; ARHGAP8; PRR5-ARHGAP8
Gene model
Location
S185 [3,306 / 9,498]
Amino acid sequence
Length: 461
>Harore.CG.MTP2014.S185.g13022.01.p
MDECLVDLSPDGGTDVLVDEPDSKLEFLPSEEPNFGSADGNDEEQTTEELELEAEKELAK
LPAPQSIAGGDNLSRPTTAWSDVSAEFADIAQYGIVEVSGVDLSGRPVIIFSSCMLPSNK
VLDHDKLLRYLKHTLDKYVESDYSFVYLHHGLNSENKPSFSWLLKAYKEFDRKYKKNVKA
MYVVHPTGVIRLLMNLMKPALSIKFGRKLRYVNYINEMSENIPVSQLNIPPQVLRHDQEM
VSKSRTQQLLLRNQDVADSGKSVEPVRTKQFGVSLKFLQENNPGYSIPKVMQECIEYLSA
NGLNTEGLFRRSPSALALKDVQNQYNNGQQVTFTDPHLAAAILKAFLRQLPEPLLTYQLY
EFILNIAYVEEDTRIRVITTLLQKLPTENLTALKSLVQFLAKVASQSHVNRMDESNLAVV
FGPNLVWSTEVASLVAMGPINMFTNLLIVHHHELFSDDSDC
Nucleotide sequence
Length: 1,386
>Harore.CG.MTP2014.S185.g13022.01.t
ATGGATGAATGTTTAGTTGACCTTTCACCTGACGGAGGAACTGATGTACTGGTTGATGAG
CCTGATTCCAAACTCGAGTTTTTACCAAGTGAAGAACCGAATTTCGGCTCTGCCGATGGC
AATGATGAGGAGCAAACTACTGAAGAACTGGAGCTTGAAGCTGAAAAAGAACTTGCCAAA
CTTCCTGCACCACAAAGCATTGCGGGTGGAGATAACCTATCCCGTCCAACAACAGCTTGG
TCAGATGTCAGTGCCGAATTCGCAGACATTGCACAGTATGGAATCGTAGAGGTTTCAGGA
GTGGACTTGTCAGGGCGCCCAGTCATCATATTCAGTTCTTGCATGCTACCATCAAATAAG
GTGTTGGACCATGACAAATTGCTAAGATATTTGAAGCACACGCTGGATAAATATGTAGAG
TCGGACTACAGTTTTGTGTATTTACACCATGGTCTTAACAGTGAAAACAAGCCGTCATTT
TCATGGTTACTGAAGGCATACAAGGAATTTGACAGAAAGTATAAAAAGAATGTGAAAGCC
ATGTATGTCGTGCACCCGACAGGCGTCATCCGTTTATTAATGAATTTAATGAAGCCCGCT
CTGAGCATTAAATTCGGCAGAAAACTCAGATACGTCAACTACATAAATGAGATGTCAGAA
AATATCCCGGTTTCTCAACTTAATATTCCTCCACAAGTGTTAAGACATGACCAGGAGATG
GTGAGTAAATCTCGAACGCAACAATTACTTCTAAGAAATCAAGATGTAGCGGACAGCGGA
AAATCGGTTGAACCCGTACGAACGAAGCAGTTTGGTGTGTCTCTTAAATTCCTTCAAGAA
AATAACCCTGGGTACAGCATCCCAAAGGTAATGCAAGAATGTATAGAATATCTCTCTGCA
AATGGTTTAAATACCGAAGGGTTGTTTCGTCGATCACCATCAGCACTTGCTCTTAAAGAT
GTTCAAAATCAGTATAACAACGGTCAACAAGTCACATTTACGGATCCGCATTTGGCTGCT
GCGATCCTGAAAGCATTTTTACGGCAACTACCAGAACCATTGCTTACATACCAGTTGTAT
GAGTTCATCCTTAACATAGCATATGTGGAAGAAGATACTAGAATTCGTGTTATTACAACG
CTACTGCAAAAGCTACCAACTGAAAACTTAACAGCTTTGAAATCATTAGTGCAATTTCTT
GCCAAGGTGGCGAGTCAAAGTCACGTTAATCGAATGGACGAGAGTAATCTCGCTGTTGTA
TTTGGTCCAAACCTGGTCTGGTCAACTGAGGTTGCATCCCTAGTAGCAATGGGACCTATC
AACATGTTCACCAATCTGTTAATTGTTCATCATCACGAACTGTTCAGCGATGATAGCGAT
TGTTAG
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[86-241] 12.646 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[86-227] 6.67E-22 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[86-238] 2.7E-18 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[89-242] 2.5E-43 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[93-227] 7.71647E-24 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[105-239] 1.6E-39 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[264-455] 7.0E-58 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[267-455] 7.46E-51 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[273-455] 40.817 |
| SMART |
RhoGAP_dom (IPR000198) - T[285-452] 1.1E-53 |
| Pfam |
RhoGAP_dom (IPR000198) - T[288-429] 6.4E-41 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BGIN_HUMAN | 37.576 % | 114 | 4.58E-27 |
| RHG01_HUMAN | 48.819 % | 364 | 1.28E-122 |
| RHG08_HUMAN | 44.988 % | 344 | 1.11E-114 |