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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S185.g08934.01.t

Possible name(s)

LMBRD2

Location

S185 [30,992 / 33,119]

Sequences

Amino acid sequence

Length: 708

>Harore.CG.MTP2014.S185.g08934.01.p
MSVGPLVLELIVVFCLALFLLHRYGNITKHHPVATFATLTAWYFSLIIIFILPLDVSSTF
YRQCVILSKQIDTREVTVPINQTGLVENVMNKTSGGNVSALFQVPENSSVSKNTSADTCE
MPWSYVPRYTLPIMWRIVYWTSQFLTWLLLPFMQSYIWSGHFTALGKIKHALIKNVVYYG
SYLLIFFALLIYVAANPSIKLNFSQLKVICITAANTWGLFLLVLLLGYGLVEVPRSVWRA
SNPMLTMAYVHFKLAKLSTEKQEAIENMEDLLVKVKSLSESIRYNHPFRKNVNIIISKCP
PEFQDEISQQGMVDFEEYDDGRRRDSTTENSLVRLHLQIIQASQMKARTSIQWKMLMDHA
MHLDNVVKNMKQIIRSWVEELPANDRPNSPKLKWYWECIFKLYLLKISAVCLVILSLVVI
WSECTFFNEDPVLSIFAIFINLAKRNYNYFYIELASCFSISYLCVCAYYTIFRIKFFNIY
YIAGHHQTDEPSLMFVGIMLCRLTAPLCLNFLGLIHLDTHITSDASDETSYTQIMGHLDV
IPIISKGFNIYFPILVVVLCFATYFSLGQRCLSAIGFQQFVDGDLEDDFTADLVEEGRQL
VNREKRKQEREIKIKNRSTTGNDISTRQWQGRTMRDAEMSKTSKNVINNDKVDLLSDTEP
IDYSSITDGPSIAGGNSYKSDNWSSGGSRWSSHRSASKRPPQNIFDDI

Nucleotide sequence

Length: 2,127

>Harore.CG.MTP2014.S185.g08934.01.t
ATGAGTGTTGGACCACTCGTTCTAGAACTCATAGTTGTGTTTTGCTTGGCGTTATTCTTG
TTGCATCGTTACGGGAACATTACGAAACATCACCCCGTCGCAACGTTCGCCACCCTAACT
GCATGGTACTTCAGTCTTATTATTATTTTCATACTCCCACTGGACGTTTCGTCGACATTT
TACCGCCAGTGCGTCATATTATCTAAACAAATAGACACCAGAGAGGTCACTGTCCCCATA
AACCAAACAGGTCTGGTCGAAAATGTAATGAATAAAACGTCGGGTGGAAATGTTTCTGCC
CTGTTTCAAGTTCCAGAGAACAGCAGTGTATCTAAAAACACTAGCGCTGATACTTGCGAG
ATGCCATGGAGTTACGTCCCACGCTACACGTTACCAATCATGTGGAGAATAGTGTACTGG
ACATCGCAGTTTCTGACCTGGTTGTTGCTGCCATTTATGCAGTCGTACATATGGTCTGGA
CATTTCACTGCGCTTGGAAAAATTAAACATGCCCTTATCAAGAACGTGGTGTACTATGGA
TCTTATCTTCTTATATTTTTCGCACTCCTCATATATGTTGCTGCCAATCCATCGATAAAA
CTCAACTTTTCCCAACTCAAAGTTATTTGCATTACGGCCGCTAACACTTGGGGTCTCTTT
CTCCTTGTTTTGTTGTTGGGTTACGGTCTTGTGGAGGTGCCCAGAAGTGTGTGGAGAGCA
TCAAACCCTATGTTGACAATGGCATACGTCCACTTCAAACTCGCCAAGCTGAGCACGGAA
AAGCAGGAGGCAATTGAAAATATGGAGGACCTACTAGTGAAAGTCAAATCGCTATCAGAA
TCCATACGATACAATCACCCGTTCAGAAAAAATGTTAATATAATAATTTCAAAATGTCCG
CCCGAGTTTCAAGATGAGATCAGTCAGCAGGGTATGGTCGACTTCGAAGAATACGACGAC
GGGAGAAGGCGGGATTCAACGACAGAAAATTCCCTGGTGCGTTTGCACTTGCAAATCATT
CAAGCCAGTCAAATGAAGGCTAGGACAAGCATACAGTGGAAAATGCTCATGGATCATGCA
ATGCATTTGGACAATGTAGTCAAAAACATGAAGCAAATCATTCGGTCTTGGGTTGAAGAA
TTACCCGCTAATGACAGGCCGAATTCACCAAAACTCAAATGGTACTGGGAATGCATATTC
AAATTATATTTGTTAAAAATTTCTGCAGTCTGTTTGGTTATATTATCTCTCGTGGTCATC
TGGTCAGAATGCACCTTCTTCAACGAAGATCCTGTGCTTTCCATTTTTGCCATTTTCATA
AATCTTGCCAAGCGAAACTACAACTACTTTTACATAGAGTTAGCGAGTTGCTTCAGCATA
TCCTATCTCTGCGTCTGCGCTTATTACACCATATTTCGCATCAAATTCTTCAACATATAT
TACATAGCGGGACATCACCAAACAGACGAGCCAAGTCTCATGTTTGTTGGCATCATGTTA
TGTAGGTTAACGGCTCCGCTATGCTTGAATTTCCTTGGCCTAATTCACCTGGACACACAT
ATCACGAGCGATGCTAGCGACGAAACTTCATATACCCAAATAATGGGTCATCTCGACGTG
ATACCTATCATATCCAAGGGGTTTAACATCTACTTTCCGATACTGGTTGTGGTTTTGTGT
TTCGCGACATATTTCAGTCTCGGCCAGCGCTGTCTTTCTGCGATTGGATTTCAGCAGTTT
GTAGACGGGGATCTGGAAGACGACTTCACGGCGGACCTGGTAGAAGAAGGTCGCCAACTC
GTCAATCGCGAAAAAAGAAAACAAGAGCGGGAAATCAAAATTAAAAATCGATCGACGACA
GGAAACGATATTTCTACAAGACAGTGGCAGGGACGCACAATGCGAGACGCGGAAATGAGC
AAAACAAGCAAAAATGTTATTAATAATGACAAAGTCGATTTACTTAGTGATACGGAGCCT
ATAGACTACAGTTCAATAACAGATGGTCCTTCAATAGCCGGTGGAAATTCGTACAAATCT
GATAACTGGTCGTCTGGTGGTTCACGGTGGTCTTCGCATCGGTCTGCTTCTAAGAGACCA
CCTCAGAATATATTTGATGACATTTGA

InterProScan

Pfam
LMBR1-like_membr_prot (IPR006876) - T[1-568] 2.4E-166

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LMBD2_HUMAN 45.491 % 594 0