- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S185.g05349.01.t
Possible name(s)
CALM1; CALM3; CALML3
Gene model
Location
S185 [96,555 / 100,353]
Amino acid sequence
Length: 496
>Harore.CG.MTP2014.S185.g05349.01.p
MEIRIFYGLLHLSASPVEFYLGMALEKRRQLKRRQRDRMRYLSFVSILSTTSMNADANWK
MRVPTLRANQLPEDLLETYEEAFFLLDPENTGVIGKREVGIVMRAIGQEPTEEEIENLVK
EVDRTGTGRLSFNDFLALLAHICQEEEPEEEWRKVFEQFDHNKDGFIDEGDLRKTMIQLR
LKFTDSDVDEMLNECAPNGKGPRRIDFDDFLTVMTFILSPKRPIVRIIEFLPMRGDFRLQ
FAVNCFYESFICIIYVKRQAKYTTPSSCHQNTICTPETYIALFCTNLYCANRVANIGVRS
PSSESQTFSISSGCRWWPTVHFKKGFLCVGLVLLPAVQCFHHSHWRSLLLNVRLLLLVNL
QLAVIPNYSSGCLTLDNFGIPIILRYNLIICYTNKAQFTSLHNWKREKRHFGVTVRPNWV
RMRILSCLILKQSIIQSLQLNWSKVYSFFYNSVIYNTFVLSIFLRKLSGENSLEAEVQLL
YFHYRYVIQKMYMIYI
Nucleotide sequence
Length: 1,491
>Harore.CG.MTP2014.S185.g05349.01.t
ATGGAGATACGTATTTTCTATGGTTTGTTGCACTTGAGTGCTTCGCCTGTAGAGTTCTAT
CTTGGCATGGCTTTGGAGAAAAGAAGACAACTGAAAAGAAGGCAACGAGATCGGATGCGA
TATTTAAGTTTTGTCAGTATTCTCAGCACAACTAGTATGAACGCGGATGCAAATTGGAAG
ATGAGGGTTCCAACGTTGCGTGCAAATCAACTTCCTGAGGATTTGTTGGAAACATATGAA
GAAGCTTTCTTCCTGCTTGATCCTGAAAATACCGGTGTTATAGGAAAGCGTGAAGTGGGA
ATTGTAATGCGAGCGATAGGACAAGAACCAACTGAAGAGGAAATAGAAAATTTGGTGAAG
GAGGTTGATCGAACTGGAACGGGAAGATTGAGTTTTAACGACTTTTTAGCGCTCCTTGCC
CATATCTGTCAGGAAGAAGAGCCTGAAGAAGAATGGCGAAAGGTGTTCGAACAATTCGAC
CATAACAAAGACGGGTTCATCGATGAAGGCGACTTGCGAAAGACAATGATACAATTACGT
TTGAAATTCACCGATTCGGACGTGGACGAAATGTTGAATGAATGCGCCCCCAATGGAAAA
GGCCCTCGGCGAATTGATTTTGACGACTTTTTAACAGTTATGACGTTTATTCTGTCTCCA
AAACGTCCCATCGTCCGAATTATTGAATTTTTACCGATGAGAGGTGATTTTCGGCTGCAG
TTCGCTGTTAACTGCTTCTATGAATCTTTCATTTGTATTATTTACGTAAAACGTCAAGCA
AAATATACTACACCTAGTAGTTGTCACCAAAATACCATATGTACGCCTGAGACCTATATA
GCTTTATTTTGCACAAACCTCTATTGTGCTAACAGAGTTGCCAACATCGGCGTCCGCTCC
CCTTCCAGCGAAAGTCAAACGTTTTCCATCTCCAGCGGATGCCGATGGTGGCCAACTGTT
CATTTTAAAAAAGGTTTCTTATGCGTAGGACTAGTGTTACTGCCAGCCGTACAGTGCTTC
CACCATTCCCATTGGAGATCACTGTTATTGAATGTTCGCCTGTTACTGCTGGTTAATCTT
CAATTAGCCGTAATTCCGAATTATTCTTCCGGGTGCTTAACATTAGATAATTTCGGAATT
CCGATTATACTTAGATATAATCTAATAATCTGCTACACGAATAAAGCTCAATTTACTTCA
CTCCATAACTGGAAAAGGGAAAAGAGGCATTTTGGTGTAACAGTTAGACCTAATTGGGTT
AGGATGAGAATTTTGAGTTGTCTAATATTGAAACAATCGATCATTCAATCGTTACAGCTT
AACTGGAGCAAAGTATACAGCTTCTTTTACAATTCCGTAATTTATAATACATTCGTCCTT
TCCATATTTTTACGAAAGTTGTCCGGTGAAAACTCTTTAGAAGCTGAGGTACAACTGCTG
TATTTCCACTATAGATATGTGATTCAAAAGATGTATATGATTTATATATGA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[64-217] 2.67E-36 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[74-109] 9.13 - T[110-145] 12.059 - T[147-182] 13.537 - T[183-220] 6.368 |
| SMART |
EF_hand_dom (IPR002048) - T[78-106] 6.8 - T[114-142] 0.84 - T[151-179] 0.011 - T[187-217] 82.0 |
| CDD |
EF_hand_dom (IPR002048) - T[79-140] 6.95685E-12 - T[153-215] 1.28782E-11 |
| Pfam |
EF_hand_dom (IPR002048) - T[80-138] 1.3E-9 - T[150-214] 3.0E-7 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[160-172] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 38.514 % | 125 | 2.49E-34 |
| CALM3_HUMAN | 38.514 % | 125 | 2.49E-34 |
| CALM2_HUMAN | 38.514 % | 125 | 2.49E-34 |