Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1859.g00079.01.t

Possible name(s)

CSMD1; CSMD2; SVEP1

Location

S1859 [0 / 2,044]

Sequences

Amino acid sequence

Length: 170

>Harore.CG.MTP2014.S1859.g00079.01.p
SRCGPNGTFIPDPTSLNCTETECDDYMMPHADRTMLTGFQTYSVAQYKCHQGYWFDKGMY
THTYRCNQDGRWDPSTSEKNCHRITCGDVNIQNIVFPKGTTVEFGSKIDVHCIDGYALNK
MNKAFMHTLTCQEGGDYKPHVSTLRCEPIPCEQPPSVPNSYVYGLFQFGM

Nucleotide sequence

Length: 836

>Harore.CG.MTP2014.S1859.g00079.01.t
TCGCGCTGTGGTCCGAACGGTACATTCATACCAGATCCTACTTCATTAAATTGTACAGAG
ACCGAGTGTGATGATTACATGATGCCGCATGCTGACAGGACCATGTTGACTGGTTTCCAA
ACATATAGTGTCGCTCAGTACAAATGTCATCAAGGGTATTGGTTCGATAAAGGAATGTAC
ACACATACATACCGTTGCAATCAGGATGGTAGATGGGACCCAAGCACTTCTGAGAAGAAT
TGCCATAGAATTACCTGTGGAGATGTGAACATACAGAACATTGTGTTTCCGAAAGGTACT
ACTGTGGAATTTGGTTCCAAAATTGATGTGCACTGTATAGATGGTTACGCCTTGAACAAA
ATGAACAAGGCCTTTATGCATACGCTAACTTGCCAAGAAGGAGGCGATTACAAGCCTCAT
GTTTCAACTCTAAGATGTGAACCTATACCATGTGAACAGCCACCTTCTGTACCCAATAGC
TATGTGTATGGACTGTTTCAATTTGGTATGTAGGTGGTGTTGCAACTCTTCAATGTTACT
TAGGATTTTTATTAGCAAAAGATCAATACCATATTGAATCTACGTGTGGAAGGGATGGAT
CGTGGTCTGTTGATTTTGAAAAATATAAATGCACTCCTGTATTTTGCTCCTCACCTCCGA
GAATGCAGCACGCAAAAAGGTATGGAAACGGCACCAAATTTGCAACAGTAATTCGATACG
TGTGTAACAAAGGATACTGGCTCGGATCAAACTTGTTTGCAAATCCATATGAAGTCTCGG
TTGAATGTTCAGCATATGGAAACTGGTCACCAATGCAATATATTGCATGCGTAAGG

InterProScan

ProSiteProfiles
Sushi_SCR_CCP_dom (IPR000436) - T[16-83] 8.033 - T[84-148] 6.418
SUPERFAMILY
Sushi/SCR/CCP_sf (IPR035976) - T[23-87] 4.59E-7 - T[91-155] 3.47E-6
Pfam
Sushi_SCR_CCP_dom (IPR000436) - T[28-78] 7.4E-6 - T[91-141] 1.7E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value