- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S184.g10971.01.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
S184 [55,981 / 59,322]
Amino acid sequence
Length: 453
>Harore.CG.MTP2014.S184.g10971.01.p
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGHMPAEKLSGTGGDDSFNTFFSETGAG
KHVPRAVFVDLEPTVVDEVRTGVYRQLYHPEQLITGKEDAANNYARGHYTIGKEIADPVL
DRIRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPAPQVST
AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPSYTNLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVGEITNACFEPS
NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP
PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFT
EAREDLAALEKDYEEVGVDSAEQEAGEDEEDEY
Nucleotide sequence
Length: 2,818
>Harore.CG.MTP2014.S184.g10971.01.t
GAAGTTGATTTCAGTTGAAAATGCGTGAATGCATCTCAATCCACGTTGGCCAGGCCGGTG
TCCAGATTGGTAATGCTTGCTGGGAGCTCTATTGTTTGGAGCATGGCATTCAGCCTGATG
GCCACATGCCAGCGGAAAAATTATCTGGTACAGGTGGTGACGATTCGTTCAACACCTTCT
TTAGCGAAACTGGTGCTGGAAAGCATGTCCCTCGAGCTGTTTTTGTGGATTTAGAACCCA
CTGTTGTGGACGAGGTACGCACGGGCGTATATCGCCAGCTCTACCATCCTGAACAACTAA
TTACTGGTAAAGAGGACGCCGCGAACAATTACGCAAGGGGACATTATACAATTGGAAAGG
AGATTGCTGATCCGGTTCTGGACCGAATTCGGAAACTTTCGGATCAGTGTACCGGCCTGC
AAGGATTTCTAATATTTCATTCGTTCGGCGGCGGAACTGGTTCGGGATTTGCTTCTCTCC
TTATGGAGAGGTTGTCTGTCGATTACGGAAAGAAATCGAAGCTGGAGTTCGCAGTATACC
CTGCCCCACAAGTATCTACTGCTGTGGTTGAACCATACAATTCTATACTCACCACGCACA
CAACTCTAGAGCATTCTGACTGCGCTTTCATGGTGGATAACGAGGCGATTTACGATATCT
GTCGTCGTAATCTTGACATAGATCGGCCGAGCTACACAAACTTGAATCGGTTGATCGGTC
AAATCGTTTCGTCCATTACCGCCTCCTTGCGATTCGACGGCGCACTGAACGTCGACCTTA
CGGAGTTCCAAACCAATCTGGTACCGTATCCACGCATTCATTTCCCATTGGTTACTTATG
CTCCGGTTATTTCTGCGGAAAAAGCCTATCATGAGCAGTTATCCGTCGGTGAAATCACGA
ATGCGTGCTTTGAACCATCAAATCAGATGGTTAAATGCGACCCGAGGCATGGCAAATATA
TGGCGTGTTGTATGCTGTACAGAGGGGACGTTGTACCCAAAGACGTTAATGCTGCCATTG
CTACTATAAAGACTAAACGTACAATACAGTTTGTGGATTGGTGTCCCACTGGATTCAAGG
TAGGCATTAATTATCAGCCGCCTACAGTTGTCCCAGGCGGAGATCTTGCCAAAGTACAGA
GGGCGGTTTGCATGTTGAGCAATACAACAGCAATTGCCGAAGCATGGGCGCGACTCGATC
ACAAATTCGATTTGATGTATGCCAAACGGGCGTTTGTTCACTGGTACGTGGGTGAAGGAA
TGGAGGAAGGCGAATTCACAGAGGCACGTGAAGATCTCGCAGCTTTAGAAAAGGATTATG
AGGAAGTTGGAGTAGATTCCGCGGAGCAAGAAGCCGGGGAGGACGAAGAAGATGAATATT
AGAGCTTTACATAATCGTTCGTTGTTCAGTTCTATGTTTTCGAGACTTATCTGTTGTTGA
ATAAAATTCGGTTCGAGCAAACGGTAGTAGCCTATTGGTATGATTTTTTAGTTGTGTCGC
GTGTTACCACGACTCGCCTTAATTTCTTAGAATTAATGTCTCGTCTTTTTTTCCTGAAAG
ACCCATGTCACAGACATTTTGTAAATCCTGATGCGAGTATCAAGCGAATTCATCTGTCCA
GTGTGCGACAAGGTTTTACCATTTTATACTCCTACAACCTCTTGCCTTGATTCATTCGAA
TAGGACGGGGATCCCCAAACTTCTTGCACCAATGATATTTGGGGTGAAAATTTGGTTCCA
TCGCATCGAATTTATCTGAATCCGGTATAGAAGACAACTGATCGCAAAATACTTGTAATA
ACCAGAAACTACACTTAAGTGATCTTATATAGTTTCCACAATCATCTTGACTTGTCAATG
TGATTAAACCCCATAGTTCACCATCTACGATTTTCCGGATCCTCATCCGACAAATTAAAT
AATTCTTGACCTCTTTAACCTCGTGGAAACCAAGTATAAAAATCGACTGAGGAAGTATGT
TCTATCCATCGTATGTGTAGCTATTTTATCGTGGCAGCTGTCACGTCATTAGTACACAAG
ACAATTTTCCAAAGTGTTTGTAATTTATTCGCTGTCATTTGACTACTCGTTACACGTTAT
TAATACTCCCGACTATTTGGGCAAAGTCGCCTATAGGAGTTGTTAACGGTACTTGTAACA
ATATTGGGTCGAAGTAACTGAAGAGGACTGCAATTTCGCTTTCCTTTTCCTATTCGATAT
AAATTCTCGTTACACAATAAACACATCAATAATGTTATAACGTGAGGAGAACCTGTTGGC
TACATTTGACTCTTGGACCGCACACTGTGTAATGTCATTAACTGGATCATCTAAGTTGCT
GTTTGCGTTCTATTTATTGATATACATTACAATAAGTTTTATGTTACTGTCAATCTAATT
TCTAGGCTTGTCGTACGACGCTTCTTATAAATACTGCATCATTGCTAAATATACTCTGCA
CATGTGGCAACACGTGTGCATGCACATGCGTTAGTTTATTGTCGATTTCAGAATATGATG
TAATTATCGTTGTACACTTCAATACCCTAGAGTCTTTTCTCATAACAGTTCTAAAGATAA
TTGCTGTCAACCTGATGTTTCCACCATTCTTGATCTACATGGTGTTCTGACTATGTAAGG
ATCTGAAGTAGAATATTCGATAAAAATAACAAATTATTGCATTCGCAAAAAAAAAAATTT
TCCAAGTAAAATATTCTCCCTACTTGATATGAACGATATAGAAATAAAACTCCGTTGCAG
CTTTTCCATTGTAGAGTTCAGCCTCGGTTAGTATGTTCCTTTAGAATGAATGATGTCG
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-245] 8.9E-99 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-269] 1.7E-128 |
| PANTHER |
Tubulin (IPR000217) - T[2-446] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-214] 3.2E-67 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 1.1E-89 - T[54-73] 1.1E-89 - T[96-107] 1.1E-89 - T[109-133] 1.1E-89 - T[135-153] 1.1E-89 - T[154-175] 1.1E-89 - T[179-192] 1.1E-89 - T[193-213] 1.1E-89 - T[381-409] 1.1E-89 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 2.2E-119 - T[46-59] 2.2E-119 - T[89-102] 2.2E-119 - T[121-129] 2.2E-119 - T[149-161] 2.2E-119 - T[162-173] 2.2E-119 - T[215-227] 2.2E-119 - T[275-290] 2.2E-119 - T[322-343] 2.2E-119 - T[348-361] 2.2E-119 - T[361-380] 2.2E-119 - T[386-402] 2.2E-119 - T[423-439] 2.2E-119 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[50-247] 5.1E-82 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[143-149] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[247-437] 5.49E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[249-394] 2.9E-59 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[264-392] 3.2E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[270-384] 2.0E-67 |
| Gene3D |
Tubulin_C (IPR023123) - T[385-438] 4.3E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 95.682 % | 861 | 0 |
| TBA3D_HUMAN | 95.682 % | 861 | 0 |
| TBA1C_HUMAN | 92.494 % | 859 | 0 |