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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S183.g11460.02.t

Possible name(s)

Harore.CG.MTP2014.S183.g11460

Location

S183 [60,403 / 64,509]

Sequences

Amino acid sequence

Length: 546

>Harore.CG.MTP2014.S183.g11460.02.p
MPITDPLLKSMKYLIEEFHSIGAPVTDSSPYLASFCQTVEHALTQGIKLGPWESLKEDGQ
SIKRKKFWTMLEHFQTSGPIPLILSSTINLTQQNIRLKFGDGKLRFVIRSSLMRKSIHVL
VEFLMSRRQDLEETWYHGKQELQMMSQASRKEIQTKGLPIVTEEPLAEQFRSLMLTVSTS
LTFELSMENSYFLDQTWNIPDMRTVEFVPTEELGLSLIYIDGYGIVAKTKAGSAAADTTE
IGLGDLLVSMNGKPLFPAKCSGENDVMNAWKKCKRKGRPCQLTVIKPRCPGTGGVFNPMR
SILSQYQDYMESYYDKKQKRLEKEMQDAEEKGAQSMAPSTLARGRAPVADGREGCGCYQV
RYVGEIVVGEHGGMGQVEGVIKTAIQRRSAFTIMNVVVEITEISVITRNCNERRTKKNCR
QCRDGKKCEQCKKEETELREIQFLTKRNKNSGVTCNNTGISSDDDLSPSAVSPGDSDIIF
RHKFADISSCGKIITDENHFCYIAGDTFCTISKQFKGYVFEARSISQARLILNNIYQGFK
RTTWFM

Nucleotide sequence

Length: 3,666

>Harore.CG.MTP2014.S183.g11460.02.t
CGGCAATCACATGATACACTACAGGAAAAAAAACAACATTAGATTCAAATAGAATTACAG
GTGTTCAAATGCTTCTAATATTAATGTGGACTTGTGCAGGAGATTTGATGTGTGGGGAAA
CTATTAAATCATCAACACAGGTTATGATTTTAAAATAAGTACCATAGTACAAAGTGCGAG
CGATGATCATGTTCCAATCAGTCTTTAGACCAAAATTAGGACAGGATGTTTGATGAACAT
TGATGTTTTGATTCCTGCAACCAATGCACATATCCTTTTTTCTGTATACTCATAATATGA
AGACATAAAGCATGGTATCTGTTCAATTTAGATATATACACCTAGTAATACACTGCATGT
TTTCTTAGCCAATATTCTACAAAGATGCACTACGTGACAACTTTACTTTCTTTTACTGAA
GTACATTTAGTGTTATTGCAAACAGCAGTCTTTAATTTTTTTCCGCTCAATTTCTCGAGA
CAAAAGCGATGATGTTACTCAGAGAAAATATGCGGGAGCTTCTTCAGCAAAATTTTATAT
TGTTAGCATACCGCAGACCAGTTGACAGCAAATTAATAAATCGACTTCCTGATAGGAAAC
GAGGCGGTTGTTGTGCGCAGCATTATGAAGAGATGCTATGACACTGCGTACAATAAAGAA
GCATATGGTAGCTTCTAGCACTAGTGTGTGCATGTGTTCACAAGGTTTGAAGGCACAATT
GAATGCAGTTGATTTTAAAGCAACAAGAGAAAAGGAAGTGGGCACAAAAGGAACCTAATA
TTAAGGAAGGATATCCATGGTTCAAATTAATGACTACTAAATATCAGCTTAGATCAGGAG
ATAGGAGAATTATAATTTCACAAAAATTCAGCTCTGGTTAGACAGTTACAGGAAAGAGAA
GGCAATTCTTAATATTGATACCATACGAAGATAATAGAACTAAATAATGGCAAATTGCGA
AGCAGAAAATTGGCCCTCAAGGGAACCCGCTATGCCTTGTGTTCGAACCCAATTATCAGC
TCATTCCATAAATTTATTACTGTGATATTGCGGTAGAATAAAGTTTGGAACAGCAGATAA
AATAACCAATGAAGCATCCAAGCAAGGTTTTGTTTCATGTAATATAAATGTTGTACAACC
TTCTGCACCTCATTGCGTGATTAGGAATGTTCAACCAATACTTTCCTCTAAAAACTAGGT
GATATAAACTAGAAGAAGTTTGACAGCGGATAATGGATCAAGACTTGAATTGAACCGGGT
ATCGGTCTGAACTTACACAACTAAATACTGAAACCAAGTGGGAATAATTGGTGGTTAGAA
TTTAACTGCAAACTGGCCAGCACCGGGTGAACGATGCCGATAACAGACCCTTTGCTGAAA
AGCATGAAATATCTCATTGAGGAATTTCATTCTATTGGAGCGCCAGTGACGGATTCTAGC
CCGTACCTGGCATCGTTTTGTCAAACAGTTGAACATGCGTTGACGCAGGGAATCAAATTG
GGACCATGGGAATCCTTAAAAGAGGATGGACAGAGCATAAAAAGGAAGAAATTCTGGACC
ATGCTGGAACACTTCCAAACAAGCGGACCGATCCCACTGATTCTGTCATCCACAATCAAT
CTGACCCAGCAAAACATCAGATTAAAGTTTGGAGATGGGAAATTAAGATTCGTAATAAGA
AGCAGCCTGATGCGGAAATCAATTCACGTCCTCGTCGAGTTTCTGATGTCGAGGCGACAA
GATTTGGAGGAAACCTGGTACCACGGTAAACAGGAGTTGCAAATGATGTCACAAGCGTCG
AGAAAAGAAATTCAGACCAAAGGATTGCCGATAGTAACCGAGGAACCTCTTGCCGAACAA
TTCAGATCGTTGATGTTGACTGTTTCAACCTCTTTGACCTTTGAACTGAGTATGGAAAAT
TCCTATTTTTTGGACCAAACATGGAACATACCAGACATGAGAACGGTCGAATTCGTACCG
ACCGAAGAACTGGGCCTTTCTCTAATATATATTGATGGATACGGAATAGTGGCAAAAACC
AAAGCAGGAAGTGCCGCCGCAGACACGACTGAAATTGGTCTCGGTGATTTGCTGGTGTCG
ATGAACGGTAAGCCTCTCTTTCCGGCCAAATGCAGTGGAGAGAATGACGTCATGAACGCT
TGGAAAAAGTGCAAACGTAAAGGAAGACCTTGTCAATTGACGGTGATCAAGCCGAGATGT
CCTGGTACAGGAGGAGTGTTCAATCCGATGCGATCCATACTGTCTCAGTATCAAGATTAT
ATGGAGAGTTATTACGATAAAAAGCAGAAGAGATTGGAAAAAGAAATGCAGGACGCTGAA
GAAAAGGGTGCACAGTCGATGGCACCATCGACGCTCGCCAGAGGCAGGGCTCCGGTCGCA
GACGGCAGGGAGGGATGCGGATGTTACCAAGTACGGTACGTCGGAGAGATCGTCGTGGGT
GAGCACGGCGGGATGGGGCAGGTAGAAGGGGTCATTAAAACCGCGATACAACGTAGATCG
GCTTTCACGATAATGAACGTTGTTGTTGAAATTACCGAAATTTCTGTAATCACGAGAAAT
TGCAACGAAAGAAGAACGAAAAAGAATTGCCGGCAGTGTCGCGATGGTAAAAAGTGTGAG
CAATGCAAGAAGGAAGAAACAGAGCTGAGAGAAATTCAATTCCTGACCAAGAGAAATAAG
AACAGTGGGGTGACTTGTAATAATACCGGAATATCCAGCGACGATGATCTATCACCCAGC
GCTGTATCTCCCGGCGACAGCGATATAATTTTCAGGCATAAATTTGCGGACATTTCGAGT
TGCGGTAAAATTATAACGGACGAAAATCACTTTTGCTACATAGCCGGTGACACTTTCTGC
ACTATATCGAAACAGTTCAAGGGTTACGTGTTCGAAGCGAGATCGATAAGCCAGGCCAGG
CTGATCCTCAATAATATATACCAGGGATTTAAGAGGACCACTTGGTTTATGTGACCAGGT
TATAACAAGTTTTGTAATTTCAATTTGAAATAACATTATGAACTTATGATTATGATTTGA
TTTTCTTTTTTCTCTTTAATACTGCAATGTTACTTATGAACTATGGAACATGGATTCAAC
TAAATTTATAGATATAATTCCTTTCGCTCAGGGTTTCTTAGACCATCGAGTAGTTCGGTG
AGTCCGTGAAGGTCAGAGGAAAATTGAAATCAAGAGCCCTTCACAATTTTATCTTCTTAT
TCAAGACAAACAACGCCAACCATTCATATTGAAATGAACTTTTGGACACAATTACAGTTT
CCTTTATATAATTTAATAAAGTTTATTCATTGTATGCAAAATGTTTTGTTTATGTGCCCA
TATGTATATTCCTAGGGTTCATAGCTTCCCAAAATTTTCACAAAGTTGAGAACCATTCCT
ACTAAATTAGTAAACTCATTTCAATTGTGTTTGAAATGAAACTGACAGTGTTGTGGTTGG
GATGTGGTTTCATTCAGTGACAGTGATGTGGTTGCAGGGTACAACCTTCCATATGGCAGT
GTAACATACAGAGGGATTTATAATAATTGGATTATATTTGAGGATCAATTTTTAACATTA
AAATAATTTCTCTGTGTCTGTACCAACAAATTAAAATTTCAACGACTAGTAATACATTTC
TAACTA

InterProScan

SUPERFAMILY
Run_dom_sf (IPR037213) - T[3-133] 1.96E-12
ProSiteProfiles
Run_dom (IPR004012) - T[26-190] 12.788
SUPERFAMILY
PDZ_sf (IPR036034) - T[189-286] 4.29E-6
ProSiteProfiles
PDZ (IPR001478) - T[202-255] 8.587

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value