Aniseed - Transcript Card

Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S182.g10117.02.t

Possible name(s)

GOLPH3; GOLPH3L

Gene model

Harore.CG.MTP2014.S182.g10117

Location

S182 [111,912 / 113,933]

Sequences

Amino acid sequence

Length: 305

>Harore.CG.MTP2014.S182.g10117.02.p
FDMFCRIYFSLYSYYYLGAVAVIGCLHHGGSIFFKRDSNKYTMSSNSGLVQRKTEATIAA
AISRKREVNQSDEEGGSDDERLSDSGDKDMRLTLMEEVLLLGLKDREGYTSFWNDCISSG
LRGCILIRSKNDAPTGDVLLDEALTHIRSGGTEENVQGWIDLLSGETWNPLKLHFQLRNV
RERLAKNLVEKGVLTTSKQNFVLFDMTTHPVVNDDVKTRLLKRIQDAVLTKWPNDVEKMD
RRTLALLYLAHASDVLENAFQPLSDEDYDTAMRRVRFLLDLDAEEQAMRAGNNELLWAVV
AVYLK

Nucleotide sequence

Length: 988

>Harore.CG.MTP2014.S182.g10117.02.t
TTTGATATGTTTTGCAGAATATATTTCAGTCTATATTCGTATTATTACCTTGGAGCTGTT
GCGGTTATTGGTTGTTTGCATCACGGTGGATCAATTTTCTTTAAGAGAGATTCTAATAAA
TATACAATGTCAAGCAACAGTGGGCTCGTCCAGAGGAAGACAGAGGCCACCATCGCAGCT
GCAATCTCTAGAAAGCGTGAAGTGAATCAGAGCGATGAAGAGGGGGGAAGTGATGATGAA
AGACTATCTGACAGTGGTGACAAGGATATGCGTTTGACTCTCATGGAGGAAGTTCTTTTA
CTTGGACTGAAAGATCGTGAGGGATACACATCTTTCTGGAACGACTGTATATCATCTGGC
CTGAGAGGTTGCATCTTGATCCGCAGCAAAAACGATGCGCCTACTGGCGACGTCTTATTG
GACGAGGCTCTCACCCACATACGCAGCGGTGGAACAGAAGAAAATGTCCAGGGTTGGATA
GACCTTCTCTCTGGAGAAACATGGAATCCGCTGAAATTACATTTTCAACTGCGGAATGTT
CGTGAACGCCTCGCAAAAAACCTTGTGGAAAAGGGGGTTTTGACCACATCGAAACAGAAT
TTTGTACTTTTTGACATGACCACCCATCCGGTCGTTAACGACGATGTCAAGACGCGTTTA
TTGAAGCGAATACAAGATGCCGTTTTAACAAAATGGCCAAACGATGTTGAAAAAATGGAT
CGCCGTACCCTCGCCTTACTATACCTCGCTCACGCAAGCGACGTTCTCGAAAATGCCTTT
CAGCCACTCTCCGATGAGGATTATGATACTGCTATGAGAAGAGTTCGCTTTCTTCTCGAT
TTAGACGCTGAGGAACAGGCGATGCGAGCCGGCAATAATGAGCTGCTGTGGGCGGTTGTT
GCCGTTTATTTAAAGTAGGACTATCTGGGTAATTTCCTCTCCTTTCTACACAAACTCTTC
CGCTTGGAATCCTAGTACGACTGCACAA

InterProScan

PANTHER	GPP34-like (IPR008628) - T[45-128] 2.1E-111 - T[129-305] 2.1E-111
Gene3D	GPP34-like_sf (IPR038261) - T[83-305] 1.1E-88
Pfam	GPP34-like (IPR008628) - T[94-280] 2.1E-44

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GOLP3_HUMAN	60.544 %	341	3.56E-118
GLP3L_HUMAN	55.245 %	303	1.69E-103