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- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1814.g05082.01.t
Possible name(s)
AL139260.3; GJA10; GJA9
Gene model
Location
S1814 [0 / 1,569]
Amino acid sequence
Length: 181
>Harore.CG.MTP2014.S1814.g05082.01.p
MERMGINYTGRFHAEVKQQQTNLAFDFSLQGKGAKAEMAMEAAQWKNCHSDEDNNKRKKR
SKGGEVVQVPLEQPLSRKMKKKDSAAEPGEEKSPLSQNYAIYSLSVILRTFVEVFFILLQ
YKLFGFYIPELYKCVGSPCPNSVDCFVSRPMEKTIFLWFMFVIAVISLILNVAEIYYLIW
Q
Nucleotide sequence
Length: 543
>Harore.CG.MTP2014.S1814.g05082.01.t
ATGGAAAGAATGGGTATAAATTATACAGGGAGATTTCACGCTGAAGTAAAACAACAACAA
ACAAACCTTGCATTTGATTTTTCTCTTCAGGGAAAAGGAGCCAAAGCGGAAATGGCGATG
GAGGCTGCACAGTGGAAAAATTGTCACAGTGATGAAGACAATAACAAAAGAAAAAAAAGA
AGCAAGGGTGGCGAGGTAGTACAAGTACCGCTTGAACAGCCATTGTCGAGGAAAATGAAA
AAGAAAGATTCGGCAGCGGAACCGGGCGAAGAAAAATCTCCGTTGAGTCAAAATTATGCA
ATATATTCCTTGTCTGTCATTTTGAGGACGTTTGTAGAAGTGTTCTTCATTCTGTTGCAG
TATAAACTCTTCGGATTCTACATACCCGAGCTCTACAAATGCGTTGGAAGTCCTTGCCCC
AATTCAGTGGACTGTTTTGTATCCAGGCCTATGGAAAAAACGATATTTCTTTGGTTTATG
TTCGTGATCGCAGTAATAAGCCTTATCCTCAACGTAGCTGAAATCTACTATTTAATATGG
CAG
| Gene3D |
Connexin_N_sf (IPR038359) - T[37-181] 1.0E-36 |
| Pfam |
Connexin_N (IPR013092) - T[50-180] 5.6E-38 |
| PANTHER |
Connexin (IPR000500) - T[66-181] 3.1E-41 |
| PRINTS |
Connexin (IPR000500) - T[98-124] 7.2E-25 - T[134-154] 7.2E-25 - T[155-178] 7.2E-25 |
| SMART |
Connexin_CCC (IPR019570) - T[112-178] 1.6E-39 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[134-150] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXA10_HUMAN | 57.143 % | 99.8 | 7.72E-25 |
| CXA9_HUMAN | 42.308 % | 101 | 1.73E-25 |
| CXA3_HUMAN | 53.75 % | 98.6 | 1.63E-24 |