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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S17.g12825.01.t

Possible name(s)

COX11

Location

S17 [312,445 / 314,273]

Sequences

Amino acid sequence

Length: 312

>Harore.CG.MTP2014.S17.g12825.01.p
MSYAGNFELIMAVMLLKIQRLEIRPILCKVFKHEPPRINLGPVFSFYSIACSNKSLFHGL
RWSGTTGLKLNSSFHRRFSHLCSRRTLRHALQQRTLCISQICFQKYPPYRSRAQRSNTDP
VLYICSLVIFMIGVSYASVPLYRLFCQATGIGGDPKLGHKTEAVTTMMPVRDRPVTVIFN
ADRHAAMQWNFKPAQDRVTVVPGETALAFYTAKNPTKEPIVGIATYNVLPFRAGLYFNKI
QCFCFEEQWLNPDEEVDMPVFFYIDPEFDNDPQLAVVDEVVLSYTFFKAEEGQTLPMPGF
MTSKFTNLKTAQ

Nucleotide sequence

Length: 1,230

>Harore.CG.MTP2014.S17.g12825.01.t
CTCCATGGTAATGAACCGTTATGCATTGATCCGGAACATTATTATCACATCAATATATGA
TTTACCCTTTGACCTCTAACCATAAATGAGTTATGCTGGGAACTTTGAATTGATAATGGC
AGTGATGCTTCTTAAAATTCAGCGCTTGGAAATACGTCCTATTCTCTGTAAAGTATTCAA
ACACGAACCTCCAAGAATAAACCTTGGACCAGTATTTTCATTTTATTCGATTGCGTGCTC
GAATAAGTCATTATTTCATGGACTACGATGGTCCGGAACGACCGGATTAAAATTAAATTC
ATCATTTCACCGAAGGTTTTCACACTTATGTTCTCGCCGAACGTTAAGACATGCTCTTCA
ACAGCGAACACTATGCATTTCACAAATATGCTTTCAGAAGTATCCACCATACAGGAGTCG
AGCTCAGAGGTCGAATACTGATCCAGTTCTCTACATTTGTTCACTTGTCATTTTTATGAT
TGGTGTCTCGTATGCATCGGTTCCTTTATATAGGTTATTTTGTCAGGCAACAGGAATCGG
AGGAGACCCTAAATTGGGGCACAAAACGGAGGCCGTTACGACTATGATGCCTGTGCGAGA
CCGCCCAGTAACTGTTATATTTAATGCAGACCGCCATGCTGCGATGCAGTGGAATTTTAA
GCCTGCACAAGATAGAGTAACGGTTGTACCAGGTGAAACAGCTCTTGCATTTTATACTGC
AAAGAATCCAACGAAAGAACCCATTGTGGGAATCGCTACATATAACGTTTTGCCTTTTAG
AGCAGGACTATATTTCAACAAGATTCAGTGTTTCTGCTTTGAGGAGCAATGGCTTAATCC
TGACGAAGAGGTGGATATGCCAGTATTTTTCTACATAGACCCGGAATTTGACAATGATCC
ACAGCTGGCGGTGGTTGATGAGGTGGTTTTGAGCTATACCTTTTTTAAAGCGGAAGAGGG
ACAAACATTGCCAATGCCTGGTTTCATGACAAGCAAATTCACCAATCTGAAAACTGCTCA
GTAATGAAATGATAAGCATATGGCTGTGTTGTTCGACTAGCCACAAGAAAATTATATCAG
AAATATGTTGTTTGTTTTCAACATTAACGGTCTTTTGTACTTTGTCTTTAAAATGCAATA
AAATAAATGATCTAAATGTGAATTGTAATTTAGGGACAGTTGCATGAACCATGCCATGTT
TGAAACCATGTTTCCAATGAGCAATCTAGG

InterProScan

Hamap
Cyt_c_oxidase_assmbl_CtaG (IPR007533) - T[103-298] 33.661
Pfam
Cyt_c_oxidase_assmbl_CtaG (IPR007533) - T[138-288] 1.0E-60
Gene3D
CtaG/Cox11_dom_sf (IPR023471) - T[165-299] 7.6E-58
SUPERFAMILY
CtaG/Cox11_dom_sf (IPR023471) - T[166-291] 3.92E-51

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COX11_HUMAN 53.138 % 266 8.32E-89