- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S17.g08213.01.t
Possible name(s)
DLK2; DLL1; NOTCH3
Gene model
Location
S17 [456,178 / 461,814]
Amino acid sequence
Length: 666
>Harore.CG.MTP2014.S17.g08213.01.p
MQKFLIKFVTDRDDCASYPCENGGECVDALNRYSCACINQFTGEICEIEPDPCESNPCQN
GGLCVNRIPDYVCSCPRTFMGDSCEKEVPTPAPPTTIPVVPSKEEEITPQPSDDEETPSE
NGTPSENETPPSGGNGGVIAAVVIILLLALLIAAAVVWYWFKYHRKQEDENDGGKQVTLI
NMKTRSDIGKQGKPTSKTTSINFLNSKGNKSPDSFMNKLKKMSEDIIMEEVTGEEETHKP
RKNARKNRQKQRPSGYQPYQPPIKRLSIPISPSEISTIMQPDSGLQGRPPWPCNDYPPQL
GHPNGPLKISPEDAVKVLNYIKSDNGRNCDMQTALSMVKNNPPVAPYFYPNYPNPLIPTV
FEPKPLPRAPPLMSSPHTLPNMPANDRQGENLELTPDEAAEVVKQLLEKSPTEHPVGPEE
AMNIMRNLRDRKYQQNNPPPIREKTIILNKEEVANIYNRFNNRQKKPEGKQDTVQNSKPK
EPRDFRACTPIREESSDVCDEKSPRNDRNGKNKMENDMSVMDYDDDDGKNSVTALRTIRQ
TRIKVPNTDRTLLPLTVLKLLRFLSRYNCNFVVCVCIYATLLFQHNTLKNRCSVRLINSY
SRLLIKYSSISAELVSHDSFAYRGVVKLFCEVSNEFYHVFFVYIRRVYSFCVFLFSLYEN
HILSQY
Nucleotide sequence
Length: 2,001
>Harore.CG.MTP2014.S17.g08213.01.t
ATGCAGAAATTCCTAATCAAATTTGTCACAGACCGAGACGATTGTGCTTCGTATCCATGT
GAAAACGGCGGCGAATGCGTAGACGCCTTGAACAGATATTCCTGTGCATGCATAAACCAA
TTCACTGGGGAGATATGCGAAATTGAACCCGATCCGTGTGAATCTAATCCTTGTCAGAAT
GGCGGTTTATGCGTAAACCGAATACCAGATTACGTGTGTTCATGTCCGAGAACGTTTATG
GGAGACAGTTGTGAAAAAGAAGTTCCAACTCCTGCTCCACCTACGACAATACCTGTAGTG
CCATCTAAAGAAGAAGAAATAACTCCGCAACCCTCCGACGATGAAGAAACGCCATCCGAG
AATGGGACGCCATCCGAGAATGAAACGCCACCATCTGGTGGTAACGGAGGCGTTATTGCA
GCTGTTGTCATAATCCTCCTGCTTGCGTTACTTATTGCCGCTGCTGTAGTGTGGTACTGG
TTCAAATACCACAGAAAACAAGAGGATGAAAACGACGGAGGTAAACAAGTGACACTTATC
AACATGAAAACAAGATCCGATATTGGAAAACAAGGAAAACCTACATCAAAGACGACTTCA
ATTAACTTTCTGAATTCAAAAGGAAACAAATCACCGGATAGCTTCATGAACAAACTGAAA
AAGATGTCTGAAGATATAATCATGGAAGAAGTGACCGGAGAAGAGGAAACTCATAAACCA
CGAAAAAACGCTCGAAAAAATAGACAGAAACAACGACCAAGTGGATACCAGCCCTATCAA
CCGCCGATCAAGAGACTATCTATCCCCATTTCACCAAGTGAAATATCTACAATAATGCAA
CCCGATTCTGGCCTACAAGGAAGACCACCATGGCCTTGCAACGACTATCCGCCACAGCTC
GGCCATCCTAATGGACCACTAAAAATATCACCTGAGGACGCTGTAAAAGTCTTAAATTAC
ATAAAGTCCGACAACGGGAGGAACTGTGATATGCAAACTGCATTATCGATGGTAAAGAAT
AATCCACCCGTTGCACCCTATTTCTATCCGAACTACCCAAATCCTCTCATTCCTACCGTA
TTCGAACCAAAGCCCCTGCCTCGAGCCCCTCCTCTAATGTCTTCGCCGCATACGCTTCCT
AACATGCCGGCAAACGACAGGCAAGGGGAGAATCTTGAACTGACCCCAGATGAAGCCGCG
GAAGTCGTAAAGCAACTACTGGAAAAATCGCCAACAGAACACCCGGTTGGACCGGAAGAA
GCCATGAATATAATGAGAAATCTACGCGACAGAAAATACCAACAAAACAATCCGCCGCCC
ATCCGAGAAAAAACAATAATACTGAACAAAGAGGAAGTGGCTAATATCTACAATCGGTTT
AACAACAGGCAAAAGAAGCCAGAGGGAAAACAAGATACGGTGCAAAACTCCAAACCGAAA
GAACCACGAGATTTCAGAGCGTGTACTCCCATACGAGAAGAAAGTTCAGACGTATGCGAT
GAAAAAAGTCCTCGAAACGACAGAAATGGTAAAAATAAGATGGAGAATGATATGTCAGTC
ATGGACTATGACGATGACGACGGTAAAAATTCCGTAACGGCGTTGCGAACTATAAGACAA
ACGAGAATAAAGGTTCCAAACACAGACAGAACACTTCTTCCGTTAACCGTTTTAAAATTG
CTAAGATTTCTCTCGAGATATAACTGTAACTTTGTTGTGTGTGTGTGTATTTATGCAACA
CTTTTATTTCAACATAACACTCTAAAAAATCGTTGTTCAGTACGGCTGATAAATAGCTAT
TCGCGATTGCTGATCAAATATTCAAGTATCTCGGCCGAACTTGTTAGCCATGATTCGTTT
GCATATCGGGGTGTAGTGAAACTATTTTGTGAAGTTTCTAATGAATTCTATCACGTGTTC
TTTGTATATATTAGACGGGTGTATTCCTTTTGTGTATTCTTATTTTCGTTATATGAAAAT
CATATTCTTTCCCAATACTGA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[11-47] 18.482 - T[49-85] 20.82 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[11-47] 5.1E-6 - T[49-85] 1.6E-4 |
| SMART |
EGF-like_dom (IPR000742) - T[14-47] 7.9E-4 - T[52-85] 1.7E-6 |
| Pfam |
EGF-like_dom (IPR000742) - T[15-43] 3.8E-5 - T[53-76] 4.9E-5 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[26-37] . - T[64-75] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[35-46] . - T[73-84] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOTC3_HUMAN | 41.772 % | 85.9 | 4.45E-17 |
| DLK2_HUMAN | 44 % | 90.5 | 1.83E-19 |
| DLL1_HUMAN | 28.521 % | 84.7 | 5.71E-17 |