- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g49282.01.t
Possible name(s)
ASPSCR1; NGLY1; UBXN6
Gene model
Location
chrUn [305,204,800 / 305,206,054]
Amino acid sequence
Length: 417
>Boschl.CG.Botznik2013.chrUn.g49282.01.p
MEAKFRNAGEGHRLTDEPTHSRAAHPSRTAMPPTRERPISESQANAAIAAMERFESKNKP
PKKIVKLPEDKRSPQCFKKSSESSVLSSTSQTHDADKVFSVEGVKFVSALNGDIFDEESL
FNHYKEELLLRLGSDEKAHASCLMIHTLTKDRKKVGDAIATLNRYFDNIINNENEMKYRK
IRQGNKVFSEKVSIVDGAEEFLMAVGFAQKLLPNNDGADEIYFVLPNESSIDMLKEAKEL
LSTCEPLSFKLFRDTKVYRASDRITNFHLPDSFYKLSLDEVKREQMRKREDVELNQQLRT
KAMREKPKINRKYRYALLRIKFPNGKILQGTFGVYEKLTALKDFVRECINVDWVPFDLKS
SLGKILDQDEETLLDLSLVPYAVLNLSWSTDVKAQLDQQGVAVDLRPDLLKNIRRLS
Nucleotide sequence
Length: 1,254
>Boschl.CG.Botznik2013.chrUn.g49282.01.t
GATGGAAGCCAAGTTTCGTAACGCAGGCGAAGGACATCGGCTCACAGACGAACCGACTCA
CAGCAGAGCCGCGCATCCATCTCGAACCGCAATGCCACCTACACGTGAAAGGCCTATTTC
CGAATCTCAAGCGAACGCAGCTATTGCTGCAATGGAGCGTTTTGAGAGCAAAAACAAGCC
ACCTAAAAAGATTGTAAAGCTTCCTGAGGATAAACGCAGCCCTCAATGTTTTAAAAAGTC
TTCTGAATCATCTGTGTTATCTTCAACATCACAAACACACGATGCAGACAAGGTATTTTC
GGTAGAAGGGGTCAAATTCGTGTCGGCGTTGAATGGTGATATCTTTGATGAAGAATCTTT
ATTCAATCATTATAAAGAAGAACTACTTTTAAGATTGGGAAGTGACGAGAAGGCGCACGC
GTCATGTCTGATGATTCACACACTGACAAAAGACCGCAAAAAAGTAGGAGATGCCATTGC
AACTTTGAACCGATATTTTGACAATATAATAAATAACGAAAATGAAATGAAATATCGAAA
AATCCGTCAAGGAAACAAAGTTTTCTCGGAAAAAGTATCAATCGTTGATGGCGCGGAAGA
ATTTTTGATGGCTGTCGGATTTGCCCAAAAATTACTCCCAAATAATGACGGAGCGGACGA
AATATATTTTGTACTCCCAAACGAGTCGAGCATCGATATGTTGAAAGAAGCAAAAGAACT
ACTTTCAACTTGTGAGCCTCTCTCGTTCAAACTTTTCAGAGATACAAAAGTATACCGCGC
TTCGGATAGAATCACAAATTTTCATCTACCGGATTCCTTCTATAAATTGTCACTGGACGA
AGTCAAAAGAGAACAAATGCGTAAAAGAGAGGATGTAGAGTTGAATCAACAACTTCGCAC
AAAAGCGATGCGTGAAAAACCGAAAATTAATCGTAAATACAGATACGCTCTTTTACGAAT
CAAATTTCCGAACGGGAAAATATTGCAAGGCACTTTTGGAGTTTATGAAAAGCTAACTGC
TTTGAAAGATTTTGTCAGAGAATGCATCAATGTGGATTGGGTGCCGTTTGACTTGAAGAG
TTCTCTCGGTAAGATATTAGATCAAGACGAAGAAACTTTGTTAGATTTATCGCTTGTGCC
GTATGCGGTGCTCAATCTTTCCTGGTCTACTGACGTGAAAGCTCAATTAGATCAACAGGG
TGTTGCAGTCGATTTGAGACCCGATCTTCTTAAAAACATACGACGACTGAGTTG
| SUPERFAMILY |
PUB-like_dom_sf (IPR036339) - T[138-252] 1.11E-24 |
| Pfam |
PUB_domain (IPR018997) - T[153-237] 1.2E-19 |
| SMART |
PUB_domain (IPR018997) - T[157-226] 2.8E-14 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[284-386] 9.04E-14 |
| SMART |
UBX_dom (IPR001012) - T[308-388] 5.6E-4 |
| Pfam |
UBX_dom (IPR001012) - T[312-385] 1.2E-6 |
| ProSiteProfiles |
UBX_dom (IPR001012) - T[318-386] 10.359 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBXN6_HUMAN | 35.55 % | 221 | 7.78E-68 |
