Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'KH2012:KH.L24.2.v1.B...'
  3. Transcript 'KH2012:KH.L24.2.v1.B...'
  4. Transcript 'KH2012:KH.C1.58.v2.A...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1795.g00388.01.t

Possible name(s)

PAPD4; ZCCHC11; ZCCHC6

Location

S1795 [0 / 3,047]

Sequences

Amino acid sequence

Length: 362

>Harore.CG.MTP2014.S1795.g00388.01.p
TLLVLYYLQQRNPPVLPVLQELYEGEKCPEVIVDEWNSWFFHDLDKLGQVWDGYKKNKET
LGVLWLGMLRFYTEDFNFKKHVISIRQKKILTAFEKEWTSKCICIEDPFDLNHNLGAGVS
RKMTNFIMKVFVKAREHFGTEPNANLNGFKNYQDYFFNAKVLMDGQEVPNDRCCRICGKI
GHFVKDCPKKRNGRKKNGDTTKMKEVECFGCGRQGHFKKDCPEYNKGQQFIGSPTKSPGN
PGMFGSPLNYPLHVGNLPSHNPFLHLGASPLMHNRGHGAPNIVYAKRNNQHNPSLFEQSN
NRQDANNSSNGKKGGKQTKQKNNGNQRQQQTTSRSNDHNPSPYPSSGENTRNRKSSDSSK
VG

Nucleotide sequence

Length: 1,088

>Harore.CG.MTP2014.S1795.g00388.01.t
ACTCTTCTAGTTTTATATTACCTACAACAGAGAAACCCTCCTGTACTTCCAGTTTTACAA
GAGCTCTACGAAGGCGAAAAGTGTCCGGAAGTTATCGTGGACGAGTGGAATTCCTGGTTC
TTTCATGATTTAGATAAATTGGGCCAAGTCTGGGATGGATATAAAAAGAACAAAGAAACT
CTTGGTGTACTCTGGCTCGGTATGCTACGATTTTACACTGAAGATTTCAACTTCAAAAAA
CATGTTATCAGTATAAGGCAGAAAAAGATATTAACTGCTTTTGAGAAGGAATGGACGTCA
AAATGCATTTGTATCGAAGATCCGTTCGATCTGAACCACAATCTCGGTGCGGGGGTTTCA
CGAAAAATGACAAATTTTATTATGAAGGTTTTCGTCAAAGCAAGAGAGCACTTCGGGACG
GAGCCGAATGCAAATCTCAATGGGTTCAAAAATTATCAGGATTATTTCTTCAACGCCAAA
GTTCTGATGGATGGCCAGGAAGTACCGAACGATCGTTGTTGCAGAATCTGCGGAAAAATC
GGACACTTTGTCAAAGACTGTCCGAAAAAACGAAACGGTAGAAAAAAGAATGGAGATACC
ACAAAAATGAAAGAAGTGGAATGCTTCGGTTGCGGACGACAAGGTCATTTTAAAAAGGAT
TGCCCTGAATATAATAAAGGCCAACAATTCATCGGTTCACCCACAAAGAGTCCAGGGAAT
CCCGGAATGTTTGGGTCTCCGTTGAATTACCCTCTACATGTCGGTAATCTACCGTCCCAC
AACCCTTTTCTTCACCTGGGTGCATCTCCGCTCATGCACAACAGAGGTCATGGTGCACCA
AACATAGTGTATGCTAAAAGAAACAATCAGCATAACCCGTCACTGTTTGAGCAGTCAAAT
AACCGACAAGACGCAAACAACTCATCGAACGGAAAAAAGGGCGGTAAACAAACGAAACAG
AAGAATAACGGAAATCAGAGACAGCAACAGACGACGTCACGCTCAAACGATCATAACCCT
TCACCTTATCCATCGTCCGGAGAAAATACTAGAAATCGAAAAAGTTCAGATTCCTCTAAA
GTGGGAAG

InterProScan

Pfam
PAP_assoc (IPR002058) - T[60-113] 2.3E-16
SUPERFAMILY
Znf_CCHC_sf (IPR036875) - T[168-225] 1.05E-8
Pfam
Znf_CCHC (IPR001878) - T[173-189] 9.8E-5 - T[207-223] 3.3E-4
SMART
Znf_CCHC (IPR001878) - T[173-189] 0.0031 - T[207-223] 0.004
ProSiteProfiles
Znf_CCHC (IPR001878) - T[174-189] 9.785 - T[208-223] 10.839

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TUT4_HUMAN 50.775 % 276 1.26E-83
TUT7_HUMAN 63.298 % 266 4.22E-80