- Transcript 'Boleac.CG.SB_v3.S232...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S172.g12278.01.t
Possible name(s)
GJA3; GJC1; GJC2
Gene model
Location
S172 [35,769 / 41,114]
Amino acid sequence
Length: 266
>Harore.CG.MTP2014.S172.g12278.01.p
MSWHFVERWLQKVNQHSTLIGKFWITFLIVFRIVVVSSVGDRVYSDEQSEFKCNTQQVGC
PNVCFNMFSPISHIRFWSFQIIMVTTPSIVFMVYSAHKIKKKAVKDKANGTSLLSPYGLR
KSRKERHRRKLKAALANEMRDITIHDAELVDGDIVTQRHAPPDYHRGLGICAGDDFDNND
MLGEIGFVRDAPGMAMSVSLDDAMIVEHLKNENQHQQQKLITTAASSRLHDVVSSTTSFD
QPYANLKPNAKNTRNGKKANDYYDYV
Nucleotide sequence
Length: 801
>Harore.CG.MTP2014.S172.g12278.01.t
ATGTCTTGGCATTTCGTTGAACGCTGGCTGCAGAAAGTCAATCAACACTCAACTTTGATA
GGGAAGTTTTGGATCACCTTCCTAATCGTTTTCAGGATAGTCGTCGTCTCAAGCGTGGGA
GATAGAGTTTACTCAGATGAACAGAGCGAATTTAAGTGTAACACGCAACAGGTCGGATGT
CCGAACGTATGTTTCAACATGTTTTCTCCGATATCACACATACGATTCTGGAGTTTTCAA
ATCATCATGGTGACGACTCCATCTATCGTCTTTATGGTTTACTCAGCTCACAAAATCAAA
AAGAAAGCGGTGAAAGATAAGGCGAACGGCACATCTCTGTTATCACCGTACGGACTACGG
AAATCTAGAAAAGAGAGACACAGGAGGAAACTGAAAGCGGCGCTTGCGAATGAGATGCGC
GACATTACGATCCATGACGCTGAGCTGGTGGACGGTGATATCGTAACACAGCGACATGCG
CCGCCCGATTATCACAGAGGCCTTGGAATATGTGCCGGCGATGACTTTGACAACAACGAT
ATGTTAGGGGAAATTGGTTTCGTTCGCGACGCACCCGGAATGGCTATGAGCGTCAGTCTG
GACGACGCCATGATCGTCGAACACTTGAAAAACGAAAACCAACATCAGCAACAAAAGTTG
ATCACGACAGCGGCGTCATCTCGCTTGCATGACGTGGTCAGTTCGACGACGTCATTCGAT
CAACCTTACGCAAATTTGAAGCCTAATGCAAAAAACACAAGGAATGGCAAAAAGGCAAAT
GACTACTACGACTACGTTTAA
| Gene3D |
Connexin_N_sf (IPR038359) - T[1-145] 2.0E-46 |
| PANTHER |
Connexin (IPR000500) - T[1-128] 5.3E-62 - T[206-225] 5.3E-62 |
| Pfam |
Connexin_N (IPR013092) - T[2-127] 8.5E-51 |
| PRINTS |
Connexin (IPR000500) - T[20-44] 2.3E-21 - T[51-73] 2.3E-21 - T[76-96] 2.3E-21 |
| SMART |
Connexin_N (IPR013092) - T[42-75] 1.1E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 49.167 % | 144 | 1.32E-40 |
| CXG2_HUMAN | 47.17 % | 140 | 8.89E-39 |
| CXA3_HUMAN | 48.98 % | 124 | 6.49E-33 |