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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S172.g02982.01.t

Possible name(s)

SERPINB12; SERPINC1; SERPINE1

Gene model

Harore.CG.MTP2014.S172.g02982

Location

S172 [170,745 / 175,238]

Sequences

Amino acid sequence

Length: 469

>Harore.CG.MTP2014.S172.g02982.01.p
MMKKTCTTLLFLLIGCCIDGEALNAKKSISNMPWPGYPFRRPPSGYFASNNSTDEEDEFY
EDYDLGVTQEEDNIDDDLKSDKKATPAFKIGVASAMHDFTFDLYREMAKNWTDRNGMFSP
LSIYTAIGMLSIGLGGNSRAQAMQILRAQALADLSTEMNQLNNIIFRKRSDVDVTSANRL
YVDKSIKLLKPFKQRMRDDYGVTAKKVNFQRSPELNRIRINAYVAKHTHKKVKQLAPKGS
ISKYTRLFIINAMYLKASWKTMFYPSIKGEFTLSPGKTIEADMMQTTGGNCYSEFNNELG
ANVVRIEMKGDLSMILIVPSVAGDFTNIEGAQGQQRVRRALEMFYNPEYEKYPQMCRITM
PKFKIQTTAADLIESLKTMGMRDVFDPYRADLTEMTPGPGRLFVSDMRHKATIDVNEKGL
EAAAATSIGISARMMPQFVAVNKPFFFIVRDDTTGANFFTGKLIKPEYK

Nucleotide sequence

Length: 1,615

>Harore.CG.MTP2014.S172.g02982.01.t
AGCTTATAAGCTATTAAAACCTACAAAACACTATTAACGACACAACGACGAGAAAGATGA
TGAAAAAAACATGTACTACATTGCTCTTCCTACTTATCGGGTGTTGTATTGACGGAGAAG
CGCTGAACGCCAAGAAATCTATATCGAACATGCCTTGGCCTGGATACCCTTTTCGCAGAC
CTCCGAGCGGATATTTTGCTTCTAATAATTCTACTGACGAGGAAGACGAATTTTATGAAG
ATTATGATTTGGGCGTGACTCAGGAAGAGGATAACATTGACGACGATCTGAAATCAGACA
AAAAAGCGACGCCAGCTTTCAAAATCGGCGTGGCAAGCGCGATGCACGATTTCACATTCG
ACCTCTACAGGGAAATGGCGAAAAATTGGACCGACAGGAACGGAATGTTTTCACCGCTCT
CCATATACACTGCTATCGGGATGCTTTCAATAGGTCTCGGTGGCAATTCACGCGCCCAGG
CGATGCAAATTTTACGAGCGCAAGCACTCGCGGATTTGAGCACAGAAATGAATCAATTGA
ACAACATCATATTCCGTAAGCGTAGTGACGTCGATGTCACGTCAGCTAACCGGCTATACG
TGGACAAGTCTATTAAACTGCTCAAGCCATTCAAGCAACGAATGAGAGATGACTACGGTG
TCACCGCCAAGAAGGTAAATTTCCAAAGAAGCCCGGAATTAAATCGTATACGTATAAACG
CCTACGTTGCCAAGCACACACACAAAAAGGTCAAGCAATTAGCTCCTAAAGGATCCATCA
GCAAATACACTCGGCTATTCATCATCAACGCTATGTACTTGAAGGCTTCATGGAAAACGA
TGTTCTACCCATCCATCAAGGGTGAGTTTACACTGAGTCCGGGCAAAACGATAGAGGCCG
ATATGATGCAAACCACTGGAGGAAATTGCTACAGCGAATTCAACAACGAACTCGGTGCAA
ATGTTGTCAGAATCGAAATGAAAGGTGACTTAAGCATGATCCTAATTGTGCCGTCAGTAG
CCGGAGATTTTACGAATATCGAAGGAGCACAGGGACAGCAACGAGTCAGACGCGCACTGG
AAATGTTCTACAATCCCGAATACGAAAAATATCCTCAAATGTGCCGTATAACCATGCCCA
AATTCAAAATCCAGACCACAGCTGCGGACCTCATCGAGAGCCTGAAAACTATGGGCATGC
GCGACGTGTTCGATCCTTACCGGGCTGACCTGACGGAAATGACACCGGGACCAGGAAGAC
TGTTCGTGAGCGATATGCGACACAAAGCGACGATAGACGTGAATGAAAAAGGACTCGAAG
CGGCAGCCGCGACATCCATCGGCATCTCAGCACGGATGATGCCACAATTCGTTGCCGTAA
ACAAGCCTTTCTTTTTCATCGTACGAGACGATACAACAGGGGCCAACTTTTTCACTGGAA
AACTTATAAAGCCAGAATACAAGTGAACACACGCATACACATACACTCTCACTCTCGCTA
TGCCCGCAAAGACTTTCGTACAAACGAGAACGCGCTTCTTGGACACGTAGATCGAAGTCG
ACGTAAATCACTTGTACGGACGTATCGCGAAACGCCTTTTTTTCGTTCTATTAAT

InterProScan

SUPERFAMILY
Serpin_sf (IPR036186) - T[82-466] 2.36E-94
PANTHER
Serpin_fam (IPR000215) - T[82-467] 4.4E-94
Pfam
Serpin_dom (IPR023796) - T[96-466] 2.6E-89
SMART
Serpin_dom (IPR023796) - T[101-466] 1.0E-82
ProSitePatterns
Serpin_CS (IPR023795) - T[439-449] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ANT3_HUMAN 28.571 % 157 4.44E-43
PAI1_HUMAN 28.756 % 159 2.98E-44
SPB12_HUMAN 28.922 % 157 3.0E-43