Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S16.g13521.01.t

Possible name(s)

ZMAT1; ZMAT4; ZNF346

Gene model

Harore.CG.MTP2014.S16.g13521

Location

S16 [475,434 / 476,280]

Sequences

Amino acid sequence

Length: 281

>Harore.CG.MTP2014.S16.g13521.01.p
MAYLKPLDPEETDQDFTTDYFMLDYGPFGVSGFCMDGKEIGDYCYLCNSQCIGKSQSKKH
FEGKRHVAKVKICRKIRTEFVVEPSTGGDLDDPDNLFLPDKCKVCDADLSNPDQQEAHYM
SEKHQKKVRHYFLVKVGVKEDRKTDFTCDDTNSAMEYCSLCKIVLSAPVVARAHYAGRKH
AKKEREQQEGDMSSQHDKTIWRRCDICDIKVNSDSQFHLHLASLKHIKNAKNQGIDYQEK
ARKLAAKRKEEIKTQLHVDTAKRVRLAKELEELIKLEKLQC

Nucleotide sequence

Length: 846

>Harore.CG.MTP2014.S16.g13521.01.t
ATGGCATATTTAAAGCCGCTAGATCCGGAGGAAACAGACCAGGATTTCACCACAGACTAC
TTCATGTTGGACTACGGCCCTTTCGGAGTCTCTGGTTTTTGCATGGACGGTAAAGAGATA
GGTGACTATTGCTATCTTTGTAACAGTCAATGCATTGGAAAGTCCCAGTCAAAGAAACAT
TTCGAAGGGAAACGACACGTTGCCAAAGTGAAAATATGCCGGAAAATCCGTACAGAATTT
GTAGTAGAACCTTCAACAGGGGGTGATTTGGATGACCCGGACAATCTTTTTCTGCCTGAT
AAATGTAAGGTTTGCGATGCTGATTTGAGCAACCCCGACCAACAAGAGGCACATTACATG
AGCGAAAAACACCAGAAAAAAGTTCGACATTACTTCTTGGTCAAAGTTGGAGTCAAAGAG
GATCGTAAGACAGATTTCACCTGTGATGACACTAATTCCGCAATGGAATATTGCTCTCTT
TGTAAAATAGTTCTGAGTGCTCCTGTCGTAGCACGGGCTCACTACGCCGGCAGAAAACAT
GCGAAAAAAGAAAGAGAACAGCAGGAAGGAGACATGTCGTCTCAACATGATAAAACAATC
TGGAGGCGCTGTGATATTTGTGACATTAAAGTCAATTCCGATTCTCAATTCCATCTGCAT
CTTGCGAGTCTAAAGCATATTAAGAATGCAAAGAACCAGGGGATAGATTATCAAGAGAAA
GCGCGTAAGCTAGCAGCCAAACGGAAGGAAGAAATAAAAACTCAACTTCATGTAGATACA
GCAAAACGAGTTAGGCTCGCAAAAGAACTTGAAGAGTTGATAAAGCTCGAAAAATTACAA
TGCTAG

InterProScan

SMART
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[39-73] 2.9 - T[97-131] 0.0076 - T[153-187] 3.8E-5 - T[199-233] 0.35
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[40-72] 6.97E-6 - T[84-133] 1.11E-8 - T[138-187] 1.57E-8 - T[191-232] 9.76E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZMAT4_HUMAN 27.111 % 78.2 3.25E-17