Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S16.g09564.01.t

Possible name(s)

SNX10; SNX11; SNX3

Gene model

Harore.CG.MTP2014.S16.g09564

Location

S16 [499,284 / 500,639]

Sequences

Amino acid sequence

Length: 289

>Harore.CG.MTP2014.S16.g09564.01.p
MLKHNEAQCHLRHECISELFKYFYRSSGFRKIFAMDEANKGTYEKNKKTVFKEFMKAKVS
DPLILHPEHESAYAVYNVQIMTNSLSFTISHSLVRRRYSDFAWLRKRLCNIPCMCDPPSL
PMKSHWWNFDSEFLQRRSKQLETFVVRVLKETLFLSCSALHLFLQSELTTKEMMECIKEG
GVNEAVLASRCAVSSRHDRILSFCGNDFVKEHFTNVVWRVEYESLKRIENIHSSDGEDEI
THEEDSQVKTIEDPYSLDRPDKLSSDNYSPWFEFWKILNEATEVPNSRN

Nucleotide sequence

Length: 870

>Harore.CG.MTP2014.S16.g09564.01.t
ATGCTAAAACATAACGAAGCTCAATGTCACTTACGTCACGAGTGCATTAGCGAATTATTC
AAGTATTTTTACAGGAGCTCAGGGTTCAGGAAGATCTTTGCGATGGATGAAGCAAATAAA
GGTACTTATGAGAAGAATAAGAAAACTGTATTCAAGGAATTCATGAAGGCTAAAGTTAGC
GATCCATTAATCCTGCATCCAGAACATGAATCTGCCTACGCGGTTTACAACGTGCAAATT
ATGACGAACAGTCTTTCTTTTACCATCTCGCATTCGCTTGTCAGACGTCGATATTCTGAT
TTTGCATGGCTGAGGAAGCGATTATGTAATATCCCTTGCATGTGTGATCCGCCCTCCTTA
CCAATGAAATCGCATTGGTGGAATTTCGATTCTGAATTTCTTCAGCGTAGAAGTAAACAA
CTTGAAACATTTGTCGTAAGGGTTTTAAAAGAGACGCTATTTCTTTCGTGTAGTGCATTA
CATTTGTTTCTGCAGTCTGAGTTGACCACCAAAGAAATGATGGAATGCATTAAAGAGGGA
GGCGTGAACGAAGCTGTACTCGCTTCGAGGTGCGCCGTTTCTTCACGACACGACAGAATT
CTTAGCTTCTGCGGGAACGATTTCGTTAAAGAACATTTTACTAACGTGGTGTGGAGGGTT
GAGTACGAAAGCTTGAAAAGGATCGAGAACATACATAGCAGCGACGGGGAAGACGAGATT
ACACACGAGGAGGATTCACAAGTTAAGACTATAGAGGATCCGTATTCTCTTGATCGCCCT
GACAAATTGTCGTCAGATAACTATTCACCTTGGTTTGAATTCTGGAAAATTTTAAACGAA
GCAACGGAAGTTCCAAATTCCAGGAATTAG

InterProScan

Gene3D	PX_dom_sf (IPR036871) - T[46-194] 3.6E-29
PANTHER	SNX11 (IPR028655) - T[52-187] 2.1E-30
SUPERFAMILY	PX_dom_sf (IPR036871) - T[54-167] 6.93E-25
ProSiteProfiles	Phox (IPR001683) - T[54-170] 13.401
SMART	Phox (IPR001683) - T[57-167] 1.9E-10
Pfam	Phox (IPR001683) - T[67-166] 7.0E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SNX11_HUMAN	37.795 %	94.7	7.64E-23