- Transcript 'Phmamm.CG.MTP2014.S1...' >
- EST 'mae8g23' >
- Transcript 'KH2012:KH.C4.547.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S16.g08562.02.t
Possible name(s)
ARFGEF1; ARFGEF2; GBF1
Gene model
Location
S16 [226,881 / 237,450]
Amino acid sequence
Length: 1,464
>Harore.CG.MTP2014.S16.g08562.02.p
MFSKASLYIAESPRYFDVFVSYFSGDSDLKSCVGNGFSEHHEKVVNGVVEPETAESMVRG
ILDDMVDKIVISHRNGGRKESNTSQDTSASSNVSRQHQLEQQLYHSQSFSHILQKDAFLV
FRSLCKLSMKPLSEGPPDPKSHELRSKILSLQLLLSILQSSGTVFRTNEMFINAIKQYLC
VALSKNGVSSVPEVFELSLAIFLKLLENFKTHLKMQIQVFFKEIFLNIIETSSSSFEHKW
MVLQTLGKICEDAQSVVDIYVNYDCDINAANIFEQLINVLSKIAQQNHPESNYTVVQEHS
MRTKSLHCLVSILRCMVEWSKDLYVNPHLMSNLGKEHNPDGAAASVPLSSTSSSNSIHGS
SQSVHSDSSSEHAGIANSSFGSVQNDANTSSDNPETIEGIKQQKSILEQGIHMFNVKPKK
GISFLQDQGMLGTSAKDIAEFLSSEGRLSPAQVGDFLGENESLNKEVMYAYVDLLNFSEV
DFVPALRMFLEGFRLPGEAQKIDRLMEKFASRYCDCNPKDSVFASADTAYVLAYSIIMLT
TDLHSAQVKRKISKEDYIKMNRGINDSKDLPPEYLEDIYEQIKRQEITLKPTRAQSVKGN
KALSAVQKKQEMNNIAVTAKALMEAVSHVQSSFISTKRYEHVRPMFQLSWRSMVVAFSMG
LQDSDDEKIVHRCLDGMRCAIRIACIFQLPLERDTFVQALSRFSLLQANAGIREMKAKNI
ESIKTLINVAYTDGNYLEESWHEILQCVSQLELLQLIGSKVRDHTTAVIKSVRSSSVIDT
TPILNKTFGMEQKKLASIQESMGETSSQSVVVAVDRIFTGSTRLDGDGIVDFVRWLSKVS
LDELSNQINPRMFCLQKIVEITYYNMGRIRIQWSRIWAILGDYFNAVGCNDEESIAFFAV
DSLRQLSMKFLEKGELPGFSFQKDFLRPFEHIMKHHTSPVIQDMVVRCIAQMVSSQANNI
KSGWKNIFAVFSMAAAHPDENIVELAFHTTSTVITDIFNMYFQSIIYCFQDAISALREFS
CCAFPDTSMEAIRLIRQCADYVAQRPDLFEKHFSEEATGRQLDGDNVWVRGWFPILFELS
IIISRCKLDVRTRGLTVMFEIMKTHGSAFQTSWWTDLFQIIFRIFDQMKVPELQLEKSDW
FATTCNHALFAVCDVFTQYYETLAPTLLPDVYGQLLWCVEKENEQLARSGVNCLENLILS
NGTKFNKSMWKLTCETIQQVFKMVAADKLMSWKPGIDDVAELQNLQLNCILTAEMIECID
RMLFYPTSTRRDDEYNVTLALSHSMQINAEVRHKDEMFSQMSENHLFVMVRCLLVAHDFA
KRFNGDNEQRTILWKAGFKGKSKPNLIRQECSSLACTLRILFRMKEQKETAERVDALLYS
VCLNALSYFASLSSESHRDAWTSVLLLLLVRILRLPEDSFFTLTRKLHTPICDLLLFELK
QEVRFLLRRYFLKCNDFPETSNDA
Nucleotide sequence
Length: 4,395
>Harore.CG.MTP2014.S16.g08562.02.t
ATGTTTTCGAAAGCTTCACTGTACATCGCAGAGTCTCCTCGTTATTTTGATGTATTTGTT
AGTTACTTTAGCGGAGATAGCGATTTGAAATCCTGTGTAGGGAATGGTTTTTCAGAGCAT
CACGAAAAGGTAGTCAACGGAGTGGTTGAGCCAGAAACTGCAGAATCCATGGTACGGGGC
ATCCTCGATGACATGGTTGACAAGATAGTTATCTCCCATCGAAATGGAGGAAGAAAAGAA
TCAAACACATCACAAGACACATCGGCAAGTTCCAATGTTTCACGACAGCATCAGTTAGAG
CAACAGTTGTATCACAGTCAGTCATTCTCGCACATCTTGCAAAAAGATGCATTCTTAGTT
TTCAGGAGCTTATGCAAGTTAAGTATGAAACCTTTATCTGAAGGGCCACCAGACCCTAAG
TCACATGAACTTCGTTCTAAAATTTTGTCTCTCCAACTCCTGCTCTCTATTCTTCAATCT
TCCGGCACAGTTTTCAGAACAAATGAAATGTTCATAAATGCGATAAAACAGTATCTCTGC
GTTGCTCTTAGCAAAAACGGCGTCTCCAGCGTACCAGAGGTGTTTGAACTTTCGCTCGCA
ATATTCCTGAAACTTCTAGAAAATTTCAAGACGCATCTCAAAATGCAAATCCAGGTTTTT
TTCAAGGAAATTTTCCTCAACATCATTGAAACTTCAAGCTCATCTTTTGAGCATAAATGG
ATGGTACTGCAGACCCTGGGGAAAATTTGTGAAGATGCCCAGAGCGTAGTAGATATATAT
GTGAATTACGACTGTGACATCAATGCTGCCAACATTTTTGAACAACTGATAAACGTCCTG
TCAAAAATTGCTCAACAGAATCATCCGGAATCTAATTATACAGTTGTACAGGAGCATTCT
ATGCGAACAAAAAGCCTACATTGTTTGGTGTCCATATTGAGGTGTATGGTGGAATGGAGT
AAAGATTTGTACGTGAATCCACACCTGATGTCAAATCTAGGAAAAGAGCATAATCCTGAT
GGTGCCGCGGCGAGTGTTCCTTTGTCTTCAACCTCATCGTCGAATAGCATTCATGGAAGT
TCTCAATCCGTCCACTCAGATTCGTCTTCAGAACACGCAGGCATTGCGAATTCCAGTTTC
GGGAGTGTTCAAAACGATGCCAACACGTCCTCGGATAACCCGGAAACAATAGAGGGAATC
AAGCAGCAGAAAAGTATTTTGGAGCAAGGAATTCATATGTTCAATGTGAAACCTAAAAAA
GGAATCAGTTTTCTACAGGACCAAGGAATGTTGGGCACATCTGCCAAGGACATTGCAGAG
TTCCTCTCCTCAGAGGGAAGACTCAGCCCTGCTCAAGTTGGGGATTTTCTTGGGGAAAAT
GAATCCTTGAACAAGGAAGTTATGTATGCCTATGTCGATCTGCTCAACTTCAGTGAGGTG
GATTTCGTTCCAGCACTACGCATGTTTTTGGAAGGTTTTCGTCTTCCTGGCGAGGCGCAG
AAGATCGACAGACTGATGGAAAAGTTTGCCAGTAGATATTGCGACTGCAATCCAAAGGAT
TCTGTTTTTGCTTCCGCTGACACCGCATACGTATTGGCTTACAGCATAATCATGCTGACA
ACAGATCTTCACAGTGCTCAGGTCAAGCGAAAAATCTCCAAGGAGGACTACATCAAGATG
AACAGGGGAATCAACGATAGCAAGGATCTGCCTCCCGAGTACCTGGAAGATATTTACGAG
CAGATAAAACGCCAGGAGATAACTTTGAAACCGACCAGAGCGCAATCTGTGAAGGGAAAC
AAAGCATTATCTGCCGTCCAGAAGAAGCAGGAGATGAATAACATTGCAGTTACTGCTAAA
GCCTTGATGGAAGCTGTCAGTCATGTGCAATCGTCCTTCATAAGTACAAAGAGATATGAG
CATGTCAGACCAATGTTTCAGTTGTCATGGCGTTCGATGGTCGTGGCTTTTTCCATGGGT
CTCCAGGATTCAGACGACGAGAAAATAGTTCATCGTTGTCTAGATGGAATGAGATGTGCA
ATCAGGATTGCATGCATCTTCCAGCTACCTCTTGAGAGGGACACATTCGTCCAAGCCCTG
TCAAGGTTTTCTCTCCTTCAAGCTAATGCCGGCATACGTGAAATGAAAGCGAAGAACATT
GAATCCATCAAAACATTGATCAACGTCGCTTATACTGACGGAAATTATTTGGAGGAGTCG
TGGCATGAGATCTTGCAGTGTGTCTCTCAACTTGAACTATTGCAACTGATCGGTTCTAAA
GTAAGAGATCATACAACAGCTGTCATTAAAAGTGTTCGTTCAAGCAGTGTGATAGACACG
ACTCCAATTCTAAACAAGACGTTTGGTATGGAACAGAAGAAATTAGCTTCCATTCAGGAG
TCAATGGGCGAAACGAGCTCTCAGAGCGTTGTAGTCGCCGTTGATAGAATATTCACAGGA
TCAACGAGACTTGATGGCGATGGAATAGTTGACTTTGTTCGATGGCTGAGTAAAGTCTCT
CTCGACGAATTGAGCAATCAAATCAATCCAAGGATGTTCTGCTTACAGAAAATAGTCGAA
ATAACATATTATAACATGGGGCGTATCAGGATCCAATGGTCCAGAATTTGGGCTATTTTG
GGAGACTATTTCAATGCGGTCGGATGCAATGACGAGGAGAGCATAGCATTCTTTGCTGTC
GACAGTCTGCGTCAACTCTCAATGAAATTTCTGGAGAAGGGAGAGCTCCCGGGTTTCAGT
TTCCAGAAAGATTTCTTGAGACCCTTCGAACATATCATGAAACATCACACGTCACCTGTA
ATTCAAGACATGGTTGTCCGTTGTATTGCTCAGATGGTGTCTTCGCAAGCAAACAATATC
AAGTCAGGGTGGAAGAATATATTTGCAGTCTTCTCAATGGCTGCTGCACATCCTGACGAA
AACATTGTCGAACTTGCTTTCCATACAACTTCAACTGTAATAACCGACATATTCAACATG
TACTTCCAATCGATCATCTACTGTTTCCAAGACGCGATCTCAGCGCTCCGTGAGTTCTCT
TGTTGTGCGTTTCCCGACACCAGTATGGAAGCGATTCGACTGATTAGACAGTGTGCTGAT
TATGTTGCTCAGAGACCAGATCTTTTTGAAAAGCACTTCAGCGAAGAGGCGACGGGTCGA
CAACTGGATGGCGACAATGTGTGGGTTAGGGGATGGTTCCCAATACTGTTTGAACTGTCA
ATCATCATTAGCAGATGCAAATTGGACGTGAGAACGAGAGGCCTAACTGTCATGTTTGAA
ATCATGAAAACTCACGGAAGTGCTTTTCAGACAAGTTGGTGGACCGACTTATTCCAGATT
ATTTTCAGGATTTTCGATCAGATGAAAGTTCCTGAATTGCAGTTGGAAAAGAGCGATTGG
TTCGCAACCACATGCAATCACGCTCTCTTTGCTGTATGCGATGTTTTCACTCAATACTAT
GAAACGTTAGCGCCCACACTTCTTCCAGATGTGTATGGTCAGTTGCTGTGGTGTGTTGAG
AAAGAGAACGAACAACTAGCTAGGTCCGGAGTGAACTGTCTCGAAAACCTAATTCTTTCG
AACGGTACCAAGTTCAATAAAAGTATGTGGAAGTTGACATGTGAAACTATACAACAAGTC
TTCAAAATGGTGGCGGCCGATAAGCTGATGTCTTGGAAACCTGGTATTGATGATGTTGCA
GAACTCCAAAATCTCCAGCTAAATTGCATCCTCACAGCAGAGATGATCGAATGCATTGAT
AGAATGCTTTTTTATCCAACTTCAACAAGGAGGGATGATGAATACAATGTAACGTTAGCT
CTGAGCCATTCTATGCAAATAAACGCTGAAGTCCGGCACAAGGACGAAATGTTCTCCCAA
ATGAGCGAAAATCATCTCTTTGTAATGGTGCGTTGTCTTCTGGTGGCTCATGATTTTGCC
AAGCGTTTCAATGGTGACAACGAACAGAGAACGATATTGTGGAAAGCAGGCTTCAAAGGG
AAATCGAAACCTAATTTGATAAGACAAGAATGCTCTAGCTTGGCTTGTACGTTGAGAATA
TTGTTTCGTATGAAGGAGCAGAAGGAGACTGCGGAACGAGTCGATGCTTTGCTGTATAGT
GTGTGTCTCAACGCACTGTCGTACTTCGCGTCGCTGAGTTCAGAATCTCACAGGGATGCG
TGGACTTCCGTTCTGCTTCTACTCCTGGTACGGATCTTGAGATTGCCTGAAGATTCGTTT
TTCACACTGACGAGAAAACTGCACACTCCCATCTGCGACCTTTTGTTATTCGAACTTAAG
CAAGAGGTCAGGTTCTTGTTACGACGTTATTTCCTCAAATGTAACGATTTTCCGGAGACG
AGTAACGATGCATGA
| Pfam |
Sec7_N (IPR032691) - T[114-272] 3.0E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[149-319] 2.04E-20 - T[877-1221] 2.04E-20 |
| ProSiteProfiles |
Sec7_dom (IPR000904) - T[396-585] 42.755 |
| SMART |
Sec7_dom (IPR000904) - T[400-587] 9.3E-93 |
| SUPERFAMILY |
Sec7_dom_sf (IPR035999) - T[401-591] 2.09E-70 |
| Pfam |
Sec7_dom (IPR000904) - T[403-587] 9.7E-66 |
| Gene3D |
Sec7_C_sf (IPR023394) - T[478-595] 1.5E-48 |
| Pfam |
Sec7_C (IPR015403) - T[909-990] 6.0E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BIG2_HUMAN | 57.044 % | 1611 | 0 |
| BIG1_HUMAN | 63.328 % | 1486 | 0 |
| GBF1_HUMAN | 24.173 % | 215 | 3.39E-56 |