- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S16.g05095.01.t
Possible name(s)
ALKBH6; ALKBH8; TRMT9B
Gene model
Location
S16 [485,072 / 487,608]
Amino acid sequence
Length: 631
>Harore.CG.MTP2014.S16.g05095.01.p
MNLEIPTENFGAKFRKKWMRSRAKLDKEAIKFCNSISRSICISNGGLGNGVTREALKEIL
QKYGKIECLIMPSKKSYSVASFRDFSSTENVVKNLQGFVLTNEANLASPSVNFYIHYIKE
FPLGTGVDFFTPKSCLPEGLIVMEEFITTELESELVEFLKKECPSETESINSNLKHRKVW
HYGYEFRYKYSDIDQQNPLPEKIPLLLEKIIAKLMETGKFQFKPDQITINKYNPGQGIPS
HIDNTEAFEDSLASLSLLSQTIMDFKKDKEHIEVLLKPRSLIIFTGEARYHWTHGICPRK
VDLVEVKPGTNNLRKNRTSVNRGTRFSITFRKVRSEYNGPTEDSNMISPAVSSPADSTDA
ERLERDHVHKVYNEIASHFTVTRENPWPNVKKFIDGLEPDSLVLDVGCGSGRYLGVREDV
CMIGCDRSESLIDICKGKGFQVFTCDGLNLPVRRSLFDVCICIAVIHHYSLLERRRKAVE
ELISTVRCGGKILIYVWALEQEYHKIKSKYLREVTNDISDSPTSLPTSNEDNTSYRESTS
NKPKYLPVHKNKRPFLQQDVLVPWHRKMVRRPCPEDKTKNEKKPDEKTFHRYYHVFKQKE
LTDLCGNFPNVTVLESYYDEGNWCIVLQRIA
Nucleotide sequence
Length: 1,896
>Harore.CG.MTP2014.S16.g05095.01.t
ATGAATTTAGAAATTCCAACTGAAAACTTCGGCGCAAAATTCCGCAAGAAATGGATGCGT
TCTCGCGCAAAACTTGACAAAGAAGCCATCAAGTTTTGCAATTCGATTTCCCGTTCGATT
TGCATATCAAACGGCGGACTTGGAAACGGAGTAACTAGAGAAGCATTAAAAGAAATATTA
CAGAAATATGGAAAGATTGAATGCTTGATTATGCCATCTAAAAAATCGTATTCTGTCGCC
TCGTTCAGAGACTTTTCTTCAACGGAAAATGTAGTGAAAAATTTACAAGGTTTCGTTTTA
ACCAATGAAGCGAATCTAGCCAGTCCCAGTGTCAATTTTTATATTCACTACATAAAGGAA
TTTCCGTTGGGGACAGGTGTAGATTTTTTCACGCCTAAAAGTTGTCTTCCCGAAGGCCTT
ATTGTTATGGAAGAATTTATTACAACGGAATTGGAATCTGAACTCGTAGAATTTCTTAAG
AAGGAATGTCCCTCCGAAACCGAATCGATCAACAGTAACCTGAAGCACCGAAAAGTATGG
CATTATGGGTACGAGTTCAGATACAAATACAGCGACATAGATCAACAAAATCCCTTGCCA
GAAAAGATACCCCTATTACTTGAAAAAATTATTGCGAAGTTGATGGAGACTGGAAAGTTC
CAGTTCAAACCGGATCAAATAACAATCAACAAATATAACCCTGGTCAGGGGATTCCTTCC
CACATAGACAATACAGAGGCATTTGAAGACAGTCTCGCTTCATTAAGCTTGCTGTCACAA
ACGATTATGGATTTCAAGAAGGACAAAGAACATATCGAAGTGTTATTGAAACCCCGATCA
TTAATAATATTTACGGGCGAAGCAAGGTACCACTGGACCCACGGAATATGTCCGCGTAAA
GTAGATCTGGTTGAGGTGAAACCGGGAACGAACAACCTTCGCAAAAACAGAACTTCGGTT
AATAGGGGGACAAGGTTTTCCATTACTTTTAGGAAAGTACGAAGCGAATACAATGGACCA
ACAGAAGATTCAAATATGATTTCTCCTGCTGTGAGCTCACCAGCTGATTCCACTGATGCA
GAGAGACTTGAAAGAGATCATGTTCACAAGGTATACAATGAAATTGCATCCCATTTCACA
GTTACAAGAGAAAACCCTTGGCCGAATGTTAAAAAGTTTATAGACGGTTTAGAGCCTGAT
TCTCTCGTACTAGACGTTGGATGTGGTAGTGGAAGGTATCTCGGAGTTCGAGAGGATGTC
TGTATGATTGGTTGCGATAGAAGCGAAAGTCTTATAGATATATGCAAAGGGAAAGGTTTC
CAGGTTTTTACTTGCGATGGCTTGAATCTTCCAGTCAGACGATCGCTCTTTGATGTCTGC
ATCTGCATCGCAGTTATTCACCATTACTCCTTGCTCGAGAGGAGACGTAAGGCGGTTGAA
GAATTAATATCGACCGTTAGATGTGGTGGAAAGATTCTCATTTACGTTTGGGCACTGGAA
CAAGAATATCACAAAATAAAATCAAAATATCTAAGAGAAGTAACCAATGATATTTCTGAT
TCACCTACTTCATTGCCTACTTCTAATGAAGATAACACGTCTTATCGAGAAAGTACATCT
AACAAGCCAAAATACCTACCTGTACACAAGAACAAAAGGCCTTTTCTACAGCAAGACGTT
CTTGTACCATGGCACAGAAAAATGGTCAGACGTCCTTGTCCTGAAGACAAAACAAAGAAT
GAAAAAAAGCCAGATGAAAAAACATTTCATAGATACTATCATGTTTTCAAGCAGAAAGAA
TTGACTGACCTTTGTGGAAATTTCCCCAATGTCACTGTCCTTGAATCTTATTATGATGAG
GGAAATTGGTGCATTGTATTACAGAGGATTGCATGA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[22-119] 2.1E-13 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[32-102] 4.8E-9 |
| Pfam |
RRM_dom (IPR000504) - T[45-102] 1.0E-5 |
| Gene3D |
AlkB-like_sf (IPR037151) - T[131-339] 2.5E-48 |
| Pfam |
AlkB-like (IPR027450) - T[139-331] 1.3E-21 |
| ProSiteProfiles |
Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[223-334] 11.25 |
| PANTHER |
ALKBH8 (IPR032863) - T[351-630] 1.4E-95 |
| SUPERFAMILY |
SAM-dependent_MTases (IPR029063) - T[354-506] 3.95E-22 |
| Pfam |
Methyltransf_11 (IPR013216) - T[404-494] 1.5E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALKB8_HUMAN | 40.181 % | 466 | 4.22E-157 |
| TRM9B_HUMAN | 32.444 % | 142 | 8.31E-37 |
