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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S168.g12138.01.t

Possible name(s)

RPL23

Location

S168 [195,043 / 197,304]

Sequences

Amino acid sequence

Length: 140

>Harore.CG.MTP2014.S168.g12138.01.p
MSKRGRGGSAGGKFRISIGLPVGAVINCADNTGGKNLYIISVFGIKGRLNRLPAAASGDM
VLATVKKGKPELRKKVHPAVVIRQSKAFRRKNGSFLYFEDNAGVIVNNKGEMKGSAITGP
VAKECADLWPRIASNAGSIA

Nucleotide sequence

Length: 588

>Harore.CG.MTP2014.S168.g12138.01.t
GCCGGGTTTACTGCTTTGTGATTCGATTGCTCAGTGCTGCTAGTGTGGCCATATCGTGTC
GTAACGCCTGAACACATCACACTATTATCACGCGGTGTCGTTTTTCGCTTAAAGTCTCTT
TTAGTGAAATCAAAATGTCGAAGAGAGGACGTGGAGGATCGGCTGGAGGGAAATTTCGTA
TATCTATCGGTCTCCCGGTGGGGGCCGTTATTAACTGCGCGGATAACACGGGTGGCAAAA
ATCTGTATATTATATCAGTCTTTGGCATCAAGGGACGATTGAATCGCCTTCCTGCGGCAG
CTTCTGGTGACATGGTCCTGGCAACAGTAAAAAAAGGAAAGCCAGAATTAAGAAAAAAAG
TTCATCCTGCTGTGGTTATTAGGCAGTCCAAAGCGTTTCGGAGGAAAAATGGATCATTCT
TGTATTTCGAAGACAATGCTGGAGTCATAGTGAATAACAAAGGAGAAATGAAAGGCTCTG
CAATTACTGGTCCTGTAGCTAAAGAATGCGCAGATTTGTGGCCGAGAATTGCTTCGAATG
CTGGTTCCATCGCGTGATAAATTTCAATAAATCAAAAGTCAGCTGCAA

InterProScan

PANTHER
Ribosomal_L14P (IPR000218) - T[1-140] 1.0E-75
Gene3D
Ribosomal_L14_sf (IPR036853) - T[1-140] 1.2E-67
SUPERFAMILY
Ribosomal_L14_sf (IPR036853) - T[11-138] 2.09E-45
SMART
Ribosomal_L14P (IPR000218) - T[19-140] 2.0E-57
Hamap
Ribosomal_L14P (IPR000218) - T[19-140] 18.082
Pfam
Ribosomal_L14P (IPR000218) - T[22-139] 8.5E-34
ProSitePatterns
Ribosomal_L14P_CS (IPR019972) - T[79-105] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL23_HUMAN 90.714 % 257 4.18E-90